Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 431,107 A→T 16.3% intergenic (+155/+22) yajD → / ← tsx HNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913431,1070AT16.3% 231.0 / 35.4 92intergenic (+155/+22)yajD/tsxHNH nuclease family protein/nucleoside channel, receptor of phage T6 and colicin K
Reads supporting (aligned to +/- strand):  ref base A (40/37);  new base T (4/11);  total (44/48)
Fisher's exact test for biased strand distribution p-value = 9.34e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01

TATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGAAGTTCAG  >  NC_000913/431010‑431206
                                                                                                 |                                                                                                   
tatatTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATa                                                                                                   <  2:1461916/100‑1 (MQ=255)
tatatTGAATTTACGTCCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATa                                                                                                   <  1:2124723/100‑1 (MQ=255)
   atTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAAt                                                                                                >  1:44483/1‑100 (MQ=255)
      gAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATccc                                                                                             <  2:976463/100‑1 (MQ=255)
      gAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATccc                                                                                             >  2:1013659/1‑100 (MQ=255)
      gAATTTACGTGCTTCTATTTGCCGGACAAAGCGTTTACGCCGCATCCGGCATTAACAAAGCACACGTTGTTAACAAGCAGAAATGCCGGGAATAAATccc                                                                                             <  1:2052821/100‑1 (MQ=37)
        aTTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCgg                                                                                           <  2:307988/100‑1 (MQ=255)
        aTTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCgg                                                                                           <  2:2340463/100‑1 (MQ=255)
          ttACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCa                                                                                         <  1:1304283/100‑1 (MQ=255)
           tACGTGCTTTTGTTGGCCGGACAAAGCGTTTACTCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAt                                                                                        <  1:1356435/100‑1 (MQ=37)
           tACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAt                                                                                        >  2:977484/1‑100 (MQ=255)
           tACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAt                                                                                        <  1:2488544/100‑1 (MQ=255)
           tACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAt                                                                                        >  1:1138197/1‑100 (MQ=255)
            aCGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtt                                                                                       <  1:1845866/100‑1 (MQ=37)
            aCGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtt                                                                                       <  1:2090157/100‑1 (MQ=37)
            aCGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAtt                                                                                       >  2:2252443/1‑100 (MQ=255)
             cGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCAttt                                                                                      >  1:653793/1‑100 (MQ=255)
              gTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtttc                                                                                     <  2:1544694/100‑2 (MQ=37)
               tGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAttttt                                                                                    <  2:1752381/100‑2 (MQ=37)
               tGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtttct                                                                                    <  1:185216/100‑3 (MQ=37)
               tGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtttct                                                                                    <  2:697339/100‑3 (MQ=37)
               tGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtttct                                                                                    <  2:668870/100‑3 (MQ=37)
               tGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtttct                                                                                    <  1:328919/100‑3 (MQ=25)
               tGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTc                                                                                    <  1:1999995/100‑1 (MQ=255)
                gCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtttctg                                                                                   <  1:1066479/100‑4 (MQ=37)
                gCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCa                                                                                   <  1:2218182/100‑1 (MQ=255)
                 cTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCAt                                                                                  >  2:1609751/1‑100 (MQ=255)
                 cTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCAt                                                                                  <  2:1930826/100‑1 (MQ=255)
                  ttttGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATa                                                                                 <  2:137625/100‑1 (MQ=255)
                  ttttGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATa                                                                                 >  1:697811/1‑100 (MQ=255)
                  ttttGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATa                                                                                 <  2:1888068/100‑1 (MQ=255)
                    ttgttgGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGATTTATTCCCGGCAtttctgattg                                                                               <  2:2193937/100‑8 (MQ=25)
                     tgttgGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATc                                                                              <  2:1727370/100‑1 (MQ=255)
                        tgGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGa                                                                           >  2:127356/1‑100 (MQ=255)
                         ggCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGaa                                                                          >  1:2096660/1‑100 (MQ=255)
                          gCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg                                                                         >  2:108055/1‑100 (MQ=255)
                          gCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg                                                                         >  2:1714418/1‑100 (MQ=255)
                          gCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg                                                                         >  2:1803253/1‑100 (MQ=255)
                          gCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg                                                                         >  2:2433004/1‑100 (MQ=255)
                          gCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAg                                                                         >  2:2073838/1‑100 (MQ=255)
                           ccGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt                                                                        <  2:1387414/100‑1 (MQ=255)
                           ccGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGt                                                                        <  2:795484/100‑1 (MQ=255)
                              gACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGt                                                                     >  2:813923/1‑100 (MQ=255)
                                  aaGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAAcc                                                                 <  1:1155870/100‑1 (MQ=255)
                                   aGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATACATCCCGGCATTTTCATAATCAGAAGTTGTAACct                                                                >  2:1069404/1‑100 (MQ=255)
                                         tACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTAcc                                                          >  2:140116/1‑100 (MQ=255)
                                          aCGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCa                                                         >  1:225940/1‑100 (MQ=255)
                                            gccgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAgg                                                       <  2:423665/100‑1 (MQ=255)
                                             ccgcATCCGGCATGAACAAAGCACACGTTGGTAGCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCAACTACCAGGt                                                      >  1:1700263/1‑100 (MQ=255)
                                              cgcATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAGTGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTa                                                     <  1:43822/100‑1 (MQ=255)
                                                cATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAac                                                   <  2:1825367/100‑1 (MQ=255)
                                                 aTCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacc                                                  <  2:469094/100‑1 (MQ=255)
                                                 aTCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacc                                                  >  2:2209531/1‑100 (MQ=255)
                                                  tCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacca                                                 >  2:1470757/1‑100 (MQ=255)
                                                  tCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAacca                                                 <  2:1499301/100‑1 (MQ=255)
                                                   ccGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAaccac                                                >  1:1810092/1‑100 (MQ=255)
                                                     ggCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCAccc                                              <  2:1064678/100‑1 (MQ=255)
                                                      gCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCAcccc                                             <  1:152404/100‑1 (MQ=255)
                                                       cATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCa                                            >  2:2159474/1‑100 (MQ=255)
                                                         tGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGc                                          >  2:2236369/1‑100 (MQ=255)
                                                          gAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc                                         <  2:589063/100‑1 (MQ=255)
                                                          gAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc                                         >  2:464394/1‑100 (MQ=255)
                                                          gAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc                                         <  2:776172/100‑1 (MQ=255)
                                                          gAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAAACAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGcc                                         >  2:1921370/1‑100 (MQ=255)
                                                             cAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGt                                      >  2:2252562/1‑100 (MQ=255)
                                                              aaaGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTa                                     <  1:2309141/100‑1 (MQ=255)
                                                                aGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTaga                                   >  2:1008072/1‑100 (MQ=255)
                                                                aGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTaga                                   >  2:1471361/1‑100 (MQ=255)
                                                                  cacaCGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGc                                 <  1:1226004/100‑1 (MQ=255)
                                                                      cGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAAc                             <  1:2258575/100‑1 (MQ=255)
                                                                       gttgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACg                            >  2:1350856/1‑100 (MQ=255)
                                                                         tgttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGtt                          <  2:1602978/100‑1 (MQ=255)
                                                                          gttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTg                         <  2:1110019/100‑1 (MQ=255)
                                                                           ttAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTGATAATCAGAAGTTGTAACCTACTACCAGGTAACTACCCCAGGCGGTAGAGCGAACgg                           <  1:1822715/97‑2 (MQ=255)
                                                                             aaCAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAg                      >  2:1100710/1‑100 (MQ=255)
                                                                               cAATCAGAAATGACGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgtt                    >  2:1704524/1‑100 (MQ=255)
                                                                                aaTCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttg                   >  2:69565/1‑100 (MQ=255)
                                                                                 aTCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTCACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgc                  >  1:2154869/1‑100 (MQ=255)
                                                                                   cAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccg                <  1:2089898/100‑1 (MQ=255)
                                                                                   cAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccg                <  2:2524987/100‑1 (MQ=255)
                                                                                      aaaTGCCGGGATTTATTCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGACgttgccgttg             >  2:2542102/1‑100 (MQ=38)
                                                                                      aaaTGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccgttg             <  1:648276/100‑1 (MQ=255)
                                                                                       aaTGCCGGGATTTATTCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccgttgc            >  2:1651686/1‑100 (MQ=39)
                                                                                       aaTGCCGGGATTTATTCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccgttgc            >  2:1278697/1‑100 (MQ=255)
                                                                                       aaTGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccgttgc            <  2:2126011/100‑1 (MQ=255)
                                                                                       aaTGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccgttgc            >  1:740521/1‑100 (MQ=255)
                                                                                        aTGCCGGGATTTATTCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccgttgcc           >  2:6089/1‑100 (MQ=255)
                                                                                        aTGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAgttgccgttgcc           >  2:2235769/1‑100 (MQ=255)
                                                                                          gCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGa         >  2:805252/1‑100 (MQ=255)
                                                                                           ccGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGaa        >  1:343965/1‑100 (MQ=255)
                                                                                             gggAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGAagt      >  1:1129148/1‑100 (MQ=255)
                                                                                               gAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGAagttc    <  2:1528784/100‑1 (MQ=255)
                                                                                                aaTAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGAagttca   <  1:603112/100‑1 (MQ=255)
                                                                                                 aTAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGAagttcag  <  2:653796/100‑1 (MQ=255)
                                                                                                 aTAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGAagttcag  >  2:2336157/1‑100 (MQ=255)
                                                                                                 aTAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCAGTAAAGCGAACGTTGAAGTTGCCGTTACCGAagttca   >  1:996782/1‑99 (MQ=255)
                                                                                                 |                                                                                                   
TATATTGAATTTACGTGCTTTTGTTGGCCGGACAAAGCGTTTACGCCGCATCCGGCATGAACAAAGCACACGTTGTTAACAATCAGAAATGCCGGGAATAAATCCCGGCATTTTCATAATCAGAAGTTGTAACCTACTACCAGGTAACCACCCCAGCCGGTAGAGCGAACGTTGAAGTTGCCGTTGCCGAAGTTCAG  >  NC_000913/431010‑431206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: