| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 83,587 | A→C | 17.9% | intergenic (‑58/+35) | leuA ← / ← leuL | 2‑isopropylmalate synthase/leu operon leader peptide |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 83,587 | 0 | A | C | 17.9% | 329.4 / 69.2 | 150 | intergenic (‑58/+35) | leuA/leuL | 2‑isopropylmalate synthase/leu operon leader peptide |
| Reads supporting (aligned to +/- strand): ref base A (55/68); new base C (13/14); total (68/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.00e-01 | |||||||||||
Only 100 of 151 total aligned reads displayed.
CGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGA > NC_000913/83490‑83686 | cgcgcgATGTGGTATCGAAACTAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGGGCCTCGCTTGGGGAATAAAAAAACCCGCGTAAt > 1:2388152/1‑100 (MQ=255) gcgcAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATg < 1:704328/100‑1 (MQ=255) gcgcAATGTGGTATCGAAAATAATGACTTGCTGGCGCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCAGGCATAAAAAAACCCGCGCAATg > 1:595971/1‑100 (MQ=255) gcgcAATGTGGTATCGAAAAAAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATg > 1:1586199/1‑100 (MQ=255) cAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGgc < 1:2503466/99‑1 (MQ=255) aaTGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGGCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTgcg < 1:136369/99‑1 (MQ=255) ggTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑tt < 2:2203185/100‑1 (MQ=255) ggTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑tt > 2:1656912/1‑100 (MQ=255) tATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCAT‑AAAAAACCCGCGCCATTGCGCGGG‑ttttt < 2:268941/100‑1 (MQ=38) aTCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑ttttt < 1:2283524/100‑1 (MQ=255) tCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑tttttt < 2:1172844/100‑1 (MQ=255) tCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑tttttt < 1:2583637/100‑1 (MQ=255) tCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑tttttt < 1:1042365/100‑1 (MQ=255) tCGAAAATAATGACTTGCGGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑tttttt < 1:1877508/100‑1 (MQ=255) cGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTtttg > 1:166937/1‑100 (MQ=255) cGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTtttg < 2:1031294/100‑1 (MQ=255) tccgatcttGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑ttttttta < 1:2592531/92‑3 (MQ=37) gAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑ttttttta < 2:2573414/100‑3 (MQ=255) gAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑ttttttt < 1:137797/99‑2 (MQ=255) aaaaTAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCCATTGCGCGGG‑tttttttat < 2:1977912/100‑4 (MQ=38) aaaaCAATGACTTGCTCGCTCATGGTTTGGGTCCTTCTCTCTTTTAGAGCGCCTCGCTTCGTGCATAAAATAACCCTCGCCAGTGCGCGGG‑tttcttt < 1:1272810/98‑2 (MQ=255) aaaTAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTtttgttt < 1:1297894/100‑1 (MQ=255) aatGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACt > 2:2362094/1‑100 (MQ=255) atGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTATTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGAGCGGG‑TTTTTTGTTTGACTg > 2:1527053/1‑100 (MQ=255) cTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTg > 2:73129/1‑100 (MQ=255) tGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCt < 1:1432029/100‑1 (MQ=255) ggCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCt > 1:2304205/1‑100 (MQ=255) ggCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCt < 2:402963/100‑1 (MQ=255) cATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAAt > 2:523990/1‑100 (MQ=255) cATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAAt < 2:1905434/100‑1 (MQ=255) aTGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATg > 1:1514821/1‑100 (MQ=255) aTGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATg < 1:2370438/100‑1 (MQ=255) tGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGc > 2:2139094/1‑100 (MQ=255) tgTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCt < 1:344348/99‑1 (MQ=255) gTTTGGGTCCTTGTCTCTTTTAGAGCTCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCtt < 2:1277212/100‑2 (MQ=255) gTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTg < 2:474959/100‑1 (MQ=255) gTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTg < 2:2342795/100‑1 (MQ=255) gTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTg < 1:1723082/100‑1 (MQ=255) tttGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTgg > 2:1426356/1‑100 (MQ=255) tttGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTgg < 2:336128/100‑1 (MQ=255) tctGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTgg < 2:878232/98‑1 (MQ=255) ttGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGa < 1:228143/100‑1 (MQ=255) tGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGAt < 2:1237945/100‑1 (MQ=255) gggTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGaga > 1:878229/1‑98 (MQ=255) ggTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGc < 2:1127845/100‑1 (MQ=255) gTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGcc < 2:2042943/100‑1 (MQ=255) tCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCg < 1:118684/100‑1 (MQ=255) cTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCt < 2:1246188/100‑1 (MQ=255) tGTCTCTTTTTGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTc < 1:339127/99‑1 (MQ=255) gTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCAc > 2:2566113/1‑100 (MQ=255) gTCTATTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGAGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCAc < 1:1527044/100‑1 (MQ=255) ctctTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCAc < 1:1568317/98‑1 (MQ=255) tctTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCg > 2:1642520/1‑100 (MQ=255) tttAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCt > 1:2041128/1‑100 (MQ=255) tAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTAc > 1:2326598/1‑100 (MQ=255) agagCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGCCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTAcc > 1:2110830/1‑100 (MQ=255) gagCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACcg < 2:842830/100‑1 (MQ=255) gagCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACcg < 2:1764267/100‑1 (MQ=255) gcgcCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACcgcg > 1:1106666/1‑100 (MQ=255) ccTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCaa > 2:845702/1‑100 (MQ=255) cTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCaaa < 1:2311342/100‑1 (MQ=255) cTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCaaa > 1:143154/1‑100 (MQ=255) gCTTCGGGCATAAAAAATCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAaaga < 1:2535358/99‑1 (MQ=255) gCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAaagaa < 2:702071/100‑1 (MQ=255) cTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAaagaag < 1:1743730/100‑1 (MQ=255) ttCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAagaaga < 1:98842/100‑1 (MQ=255) tCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGAt < 1:819792/100‑1 (MQ=255) tCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGAt > 1:760268/1‑100 (MQ=255) cGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGAt < 2:799473/99‑1 (MQ=255) gtcacacaaaaaaCCCGCGCCATTGCGCGGG‑CTTTTTGTTTGACTGCGTGCTGGCTTAATGCGGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATg > 1:2339140/8‑99 (MQ=37) gggCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGc > 1:415013/1‑100 (MQ=255) gCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGt < 2:426424/100‑1 (MQ=255) aaacaaaaaaCCCGCGCCATTGCGCGGGTTTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGt > 1:2213181/5‑100 (MQ=37) tctaaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGttt < 2:71592/97‑1 (MQ=255) atagtaaagCCCGCGCAATGGCGCGGG‑TTTTGTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGttt < 1:1811174/95‑1 (MQ=255) aacaaaaaaCCCGCGCCATTGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGttt > 2:2173264/4‑100 (MQ=38) aTAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGttt < 1:1165689/100‑1 (MQ=255) acaaaaaaCCCGCGCCATTGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGGCGCTCACTCGTCTACCGCGCAAAGAAGATggagtta > 1:484487/3‑94 (MQ=37) caaaaaaCCCGCGCCATTGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtag > 2:2216835/2‑100 (MQ=255) aaaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtag < 2:579423/100‑1 (MQ=255) aaaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtag < 1:568996/100‑1 (MQ=255) aaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagt < 1:2139080/100‑1 (MQ=255) aaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagt > 2:1619396/1‑100 (MQ=255) aaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagt < 2:955/100‑1 (MQ=255) aaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagt > 2:2056405/1‑100 (MQ=255) aaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagt < 2:107321/100‑1 (MQ=255) aaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagt < 2:1315591/100‑1 (MQ=255) aaaaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtaga > 1:71591/1‑99 (MQ=255) aaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtag > 1:1965754/1‑100 (MQ=255) aaaaCCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtag < 1:1656903/100‑1 (MQ=255) aaCCCGCGCCATTGCGCGGG‑TTTTTTGTTTGACTTCTTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagta > 1:2054122/1‑100 (MQ=39) aaCCCGCGCCATTGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGTCTTACTGCTGTATGCCGCTCACTCGTCTACCGCGCAAAGATGATCCGATtagtagta > 2:1264569/1‑100 (MQ=37) aaCCCGCGCCATTGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagta > 2:1038788/1‑100 (MQ=255) aCCCGCGCCATTGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagtag > 2:1316231/1‑100 (MQ=255) cccGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagtagt < 2:2507152/100‑1 (MQ=255) cccGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagtagt < 2:836747/100‑1 (MQ=255) cgcgCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTtagtagtagt < 1:69514/98‑1 (MQ=255) cgcAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGAc < 2:2460943/100‑1 (MQ=255) cAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCg > 2:914363/1‑100 (MQ=255) aaTGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGa < 2:1145106/100‑1 (MQ=255) | CGCGCAATGTGGTATCGAAAATAATGACTTGCTGGCTCATGGTTTGGGTCCTTGTCTCTTTTAGAGCGCCTCGCTTCGGGCATAAAAAAACCCGCGCAATGGCGCGGG‑TTTTTTGTTTGACTGCGTGCTGGCTTAATGCTGGATGCCGCTCACTCGTCTACCGCGCAAAGAAGATGCGTTTAGTAGTAGTAGACCGA > NC_000913/83490‑83686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |