| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,466,211 | G→A | 16.9% | intergenic (‑31/+88) | treB ← / ← treR | trehalose‑specific PTS enzyme: IIB and IIC component/trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,466,211 | 0 | G | A | 16.9% | 257.2 / 37.9 | 118 | intergenic (‑31/+88) | treB/treR | trehalose‑specific PTS enzyme: IIB and IIC component/trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base G (54/41); new base A (12/8); total (68/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.50e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
AATATTGCCGCGCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGACAGGGT > NC_000913/4466112‑4466310 | aaTATTGCCGCGCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTttggttg < 1:139334/100‑1 (MQ=255)aaTATTGCCGCGCCCGCCGACCAGTTCAAGCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTttggttg < 1:771248/100‑1 (MQ=255) ccgatctgcgcCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGc < 1:10727/93‑1 (MQ=255) ttGCCGCGCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTg < 2:2155691/100‑1 (MQ=255) ttGCCCCGCCCGCCCACCAGTTCAATCACCCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGACGACATTTttggttg < 1:2460011/96‑1 (MQ=255) tGCCGCGCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGc > 1:1515173/1‑100 (MQ=255) tGCCGCGCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCAACATAAAGCCCCATGTCAGATGACATTTTTGGTTGGCTg > 1:390962/1‑99 (MQ=255) gCCGCGCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCa > 2:86644/1‑100 (MQ=255) gCCGCGCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCa > 2:1600993/1‑100 (MQ=255) cgcgCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGa > 2:2036102/1‑100 (MQ=255) gcgcCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGcagatcgg > 2:10727/1‑93 (MQ=255) ctccgccgACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAata < 2:203405/98‑1 (MQ=255) cccgccGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAatat < 2:235440/100‑1 (MQ=255) cccgccGACCAGTTCAATCAACCAATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAata < 1:1573223/99‑1 (MQ=255) ccgccgACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAataag > 1:203403/1‑98 (MQ=255) gACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAat < 1:2534032/92‑1 (MQ=255) aCCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTTTTTGGCTGTAGAATACATTgcg > 1:485301/1‑99 (MQ=255) aCCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTgcgc < 2:1891746/100‑1 (MQ=255) aCCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTgcgc < 2:2200178/100‑1 (MQ=255) cAGTTCAATCAACCGATCGATCTCCGTTTGGTTTATTTTGCTCATCATAAGGCCCCATGGCAGATGACATTTTTGGTTGGCTGGAGAATATATTGCGCgg > 1:2303907/1‑100 (MQ=255) aGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGa > 1:39763/1‑100 (MQ=255) gTTCAATCAACCGATGGATATCCGTTTGGGTAATTTTGCTCATCATAAAGCCCCATGGCAGGTCACATTTTTGGTTGGCTGCAGAATATATTGCGCGGaa > 1:2369754/1‑100 (MQ=255) gTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGaa > 1:934560/1‑100 (MQ=255) gTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGaa > 2:1242975/1‑100 (MQ=255) gTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGaa > 2:146854/1‑100 (MQ=255) caatcaaCCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGaaaaa > 2:1518074/1‑100 (MQ=255) caatcaaCCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGaaaaa > 2:1174763/1‑100 (MQ=255) caatcaaCCGATCGATATCCGTTTGGTTTAATTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGaaaaa > 2:1669108/1‑100 (MQ=255) atcaaCCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAAtt > 1:145565/1‑100 (MQ=255) atcaaCCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAAtt < 1:1296821/100‑1 (MQ=255) tcaaCCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAAttt > 2:2377803/1‑100 (MQ=255) aCCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTaaa > 1:1873110/1‑100 (MQ=255) gatcgatATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAAc < 2:529667/100‑1 (MQ=255) gatcgatATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAAGTTaaaaa > 2:1677238/1‑99 (MQ=255) gatcgatATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAAc > 2:2514553/1‑100 (MQ=255) atcgatATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACg < 1:1638854/100‑1 (MQ=255) cgatATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACggg < 1:689140/100‑1 (MQ=255) cgatATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACggg > 2:513330/1‑100 (MQ=255) cgatATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACggg > 1:240595/1‑100 (MQ=255) gatATCCGTTTGGTTTATTTTGCTCATCATAAAACCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGa > 1:1553199/1‑100 (MQ=255) tCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGt > 1:1968832/1‑100 (MQ=255) tCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGt > 1:1305175/1‑100 (MQ=255) ccGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGtt > 1:980315/1‑100 (MQ=255) cGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTc > 1:1734053/1‑100 (MQ=255) gTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTcc > 2:539385/1‑100 (MQ=255) gTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTcc < 1:299530/100‑1 (MQ=255) ttGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCg < 1:1711906/100‑1 (MQ=255) ttGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTCCGCGGAAAAATTTAAAAACGGGAACGTTCCCg < 2:2457842/100‑1 (MQ=255) tGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGTTTATCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGa > 1:307843/1‑100 (MQ=255) ggTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTTTTTTTTTTTAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGaa > 1:406601/1‑100 (MQ=255) ggTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGaa < 1:584064/100‑1 (MQ=255) gTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGATATTTTTTTTTTTTTGTAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGaaa > 1:1382484/1‑100 (MQ=255) gTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGaaa > 1:1760586/1‑100 (MQ=255) gTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGaaa < 1:819790/100‑1 (MQ=255) tttATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAAc > 1:417076/1‑100 (MQ=255) aTTTTGCTCATCATAAAGCCCCATAGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCa > 1:453066/1‑100 (MQ=255) tttGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGc < 2:94792/100‑1 (MQ=255) tGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGa < 1:1001852/100‑1 (MQ=255) tGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATCTTGCGCGGAAAAATTTAAAACCGGGAACGTTCCCGAAACGCAgaga > 2:2248775/1‑100 (MQ=255) tGCTCAGCATAAAGCGCCACGGCAGATGAAATTTTTGATTGCCTGCAGAATAAAATGCACGGAAAAATGAAAAAACGGATAACTTCCCGAAACGCAGCg > 1:976012/1‑99 (MQ=255) gCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGaa > 2:715448/1‑100 (MQ=255) cTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAg < 2:2330706/100‑1 (MQ=255) cTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAg > 1:597420/1‑100 (MQ=255) catcatAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGAt > 1:1594676/1‑100 (MQ=255) catcatAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGAt < 2:2437480/100‑1 (MQ=255) catcatAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGAt > 2:1225571/1‑100 (MQ=255) atcatAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATc < 1:1181787/100‑1 (MQ=255) tcatAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATca > 2:1264970/1‑100 (MQ=255) atAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATcaca < 1:1153497/100‑1 (MQ=255) atAAAGCCCCATGCCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATcaca > 2:1760909/1‑100 (MQ=255) tAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACaa > 1:676622/1‑100 (MQ=255) tAAAGCCCCATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACaa > 1:744483/1‑100 (MQ=255) aaaGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAAt > 2:2508902/1‑100 (MQ=255) aaGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAAtt > 2:1645018/1‑100 (MQ=255) aGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAAtt < 2:482530/99‑1 (MQ=255) ccccATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTAt < 1:1959671/100‑1 (MQ=255) cccATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATc > 2:1039663/1‑100 (MQ=255) cccATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATc < 2:725128/100‑1 (MQ=255) ccATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCg < 2:1361237/100‑1 (MQ=255) cATGGCAGATGACATTTTTGGTTAGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGt < 2:1382492/100‑1 (MQ=255) tGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGt < 1:592649/98‑1 (MQ=255) gCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAg < 1:1163280/100‑1 (MQ=255) gCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAg < 1:415107/100‑1 (MQ=255) cAGATGACATTCTTGGTTGGTTGCAGAATATATTGAGCGTAAACATTTAAAAACGGGAACTATCCAGAAAAGCAGCGGACATCACAATTTATCg > 1:1258476/1‑94 (MQ=255) tGACATTTTTGTTTGGCTGCAAAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAAc < 1:694118/100‑1 (MQ=255) tGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAAc < 1:1421821/100‑1 (MQ=255) gACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACg > 2:747632/1‑100 (MQ=255) aCATTTTTGATTTGCTACAGAATATATTGCTCAGATAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAATATCACAATTTATCGTTCAGGAAACGa < 1:1272639/100‑1 (MQ=255) tttttGGTTGGCTACAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCa < 2:409093/100‑1 (MQ=255) ttttGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAg < 2:2235673/100‑1 (MQ=255) tttGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAgg < 1:2322699/100‑1 (MQ=255) tttGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAgg > 1:889501/1‑100 (MQ=255) ttggttggCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACTCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGa < 2:1181127/100‑1 (MQ=255) ttggttggCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGa < 1:2457045/100‑1 (MQ=255) nttggCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGACAg > 2:356487/2‑100 (MQ=255) gttagCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGACAg > 1:657679/1‑100 (MQ=255) gttagCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGACAg > 2:1110016/1‑100 (MQ=255) tggCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGACAggg > 2:934841/1‑100 (MQ=255) ggCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGACAGGGt > 2:325061/1‑100 (MQ=255) ggCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGACAGGGt > 1:1561587/1‑100 (MQ=255) | AATATTGCCGCGCCCGCCGACCAGTTCAATCAACCGATCGATATCCGTTTGGTTTATTTTGCTCATCATAAAGCCCCATGGCAGATGACATTTTTGGTTGGCTGCAGAATATATTGCGCGGAAAAATTTAAAAACGGGAACGTTCCCGAAACGCAGCGAAGATCACAATTTATCGTTCAGGAAACGATCAGGACAGGGT > NC_000913/4466112‑4466310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |