| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 560,553 | C→T | 16.4% | A286V (GCC→GTC) | sfmD → | putative outer membrane export usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 560,553 | 0 | C | T | 16.4% | 174.6 / 26.3 | 80 | A286V (GCC→GTC) | sfmD | putative outer membrane export usher protein |
| Reads supporting (aligned to +/- strand): ref base C (35/31); new base T (8/5); total (43/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.43e-02 | |||||||||||
ACGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCTTTTGA > NC_000913/560454‑560652 | aCGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGc < 2:1024083/100‑1 (MQ=255)aCGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGc > 1:684549/1‑100 (MQ=255)aCGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGc < 1:1514556/100‑1 (MQ=255) cGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGcc < 1:272653/100‑1 (MQ=255) cGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGcc < 2:2375265/100‑1 (MQ=255) ggCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGccc < 1:2352150/100‑1 (MQ=255) ggCAATAAAGGAAGTGATTTTTTCGATGGCGTTGGATGTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATGCTGATAGCCAGCAAGGGTTTGccc < 1:821967/100‑1 (MQ=255) gCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGcccc > 1:880655/1‑100 (MQ=255) gCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGcccc < 2:37842/100‑1 (MQ=255) cAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCa < 2:75191/100‑1 (MQ=255) aTACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAAc < 2:880658/100‑1 (MQ=255) aTACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAAc < 1:309718/100‑1 (MQ=255) aTACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAAc < 1:2337882/100‑1 (MQ=255) tataGGAAGTGATATTTTCGATGGCTTTGGATTTCGTGGTGTACGGCTTTATTCTTCTTATAATATGTATTCTGATAGCTAGCAAGGGTTTGACCCAACg < 1:230393/97‑1 (MQ=255) ggAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTAc > 2:2224811/1‑100 (MQ=255) ggAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTAc > 1:2490536/1‑100 (MQ=255) gAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACg < 1:451425/100‑1 (MQ=255) gTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAACAAGGGTTTGCCCCAACGGTACGTgg < 1:470093/100‑1 (MQ=255) gATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGa > 1:1282572/1‑100 (MQ=255) atatTTTCCATCGCGTTGGATTTCGTGGTGTACCGCTTTATTCTTCTGATAACATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGa < 1:407555/99‑1 (MQ=255) aTGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTAc < 1:666659/100‑1 (MQ=255) gCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTAcggc > 2:1522854/1‑100 (MQ=255) gTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTAcggcgg > 2:1282017/1‑100 (MQ=255) gTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTAcggcgg > 2:1809442/1‑100 (MQ=255) ttGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACggcggc > 2:714726/1‑100 (MQ=255) tGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGcc < 1:1144188/100‑1 (MQ=255) tGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGcc < 2:610970/100‑1 (MQ=255) ctaTTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGccc < 2:1929526/98‑1 (MQ=255) aTTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAg > 2:1290172/1‑100 (MQ=255) aTTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAg > 1:1929516/1‑100 (MQ=255) aTTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGccc > 1:673794/1‑98 (MQ=255) aTTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCa > 1:983203/1‑99 (MQ=255) ttCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGcn < 2:860334/100‑2 (MQ=255) ttCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCt < 1:2483493/100‑1 (MQ=255) tCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTa < 1:917420/100‑1 (MQ=255) tCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTa < 2:1317496/100‑1 (MQ=255) gtggtgTACGGCTTTATTGTTGTGATAATATTGTTCCTGGTGGCCAGCAAGGCTTTGCCCAAACGGTGCGTGGGATGGCCCGTACGGCGGCCCAGCTAAc < 1:1168264/100‑1 (MQ=255) gtggtgTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAAc < 2:1655373/100‑1 (MQ=255) ggtgTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGa < 2:1884272/100‑1 (MQ=255) ggtgTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGa > 1:1324559/1‑100 (MQ=255) tgtACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGAtt > 1:1282639/1‑100 (MQ=255) gtACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTc > 1:961531/1‑100 (MQ=255) gtACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGAtt > 1:1987759/1‑99 (MQ=255) tACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCg < 2:1334330/100‑1 (MQ=255) tACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCg < 1:908695/100‑1 (MQ=255) cGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGc > 2:1855279/1‑100 (MQ=255) cGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGc > 2:1855389/1‑100 (MQ=255) ggCTTTATTCTTCGGATAATATGTATCCGGATGGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCa < 2:811453/100‑1 (MQ=255) gCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCaa > 1:1151659/1‑100 (MQ=255) gCTATAATCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGTTTGACCGTATGGCCGCCAAGCTAACGATTCgg > 1:109778/1‑97 (MQ=255) ttATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAAt < 2:2068747/100‑1 (MQ=255) tATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATg > 2:303677/1‑100 (MQ=255) aTTCTTCGGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATgg > 2:1359321/1‑100 (MQ=255) tcttctGATAATATGTATCCTGATATCCAGCAAGGGTTTGCCCAAACGGTACGTGGTATTGACCGTAAGGCGGACGAGCTAACGATTCGGCaaaa > 1:2050658/1‑95 (MQ=255) ttctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGtttt > 2:2109129/1‑100 (MQ=255) tctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTGtta > 1:420785/1‑100 (MQ=255) tGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGCATTGCCCGTACGGCGGCCCAGCTAACGATTCTGCAAAATTGTTttatt > 1:816911/1‑100 (MQ=255) tGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGGACGTGGGATCGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATgg > 1:2415556/1‑93 (MQ=255) ataataTGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTtattat < 1:1116987/100‑1 (MQ=255) ataataTGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttatta > 1:2261986/1‑99 (MQ=255) ataataTGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGAATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTtattat < 1:888397/100‑1 (MQ=255) taataTGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATtatc < 2:1247135/100‑1 (MQ=255) ctatatGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATtatc < 1:647321/98‑1 (MQ=255) aataTGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATtatct < 1:1173800/100‑1 (MQ=255) atatGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATtatcag > 2:647324/1‑98 (MQ=255) atGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGTCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATtatctatc < 1:1494504/100‑1 (MQ=255) tGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCa > 1:1444817/1‑100 (MQ=255) gTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCaa < 1:1878790/100‑1 (MQ=255) tATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCaaa > 1:254815/1‑100 (MQ=255) tCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGc < 2:817078/100‑1 (MQ=255) ccTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCt > 2:86771/1‑100 (MQ=255) cTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTa > 2:2119869/1‑100 (MQ=255) gATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATg > 2:1570525/1‑100 (MQ=255) gATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATg < 1:714723/100‑1 (MQ=255) aTAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGt < 2:793646/100‑1 (MQ=255) aGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGttt > 1:2000122/1‑100 (MQ=255) aGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGt < 1:830886/98‑1 (MQ=255) gCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGGCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTc > 2:1227178/1‑100 (MQ=255) gCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTc < 1:1008668/100‑1 (MQ=255) gCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTc > 2:1647336/1‑100 (MQ=255) ccAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTcc > 2:1628077/1‑100 (MQ=255) cAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTccc > 2:62626/1‑100 (MQ=255) gCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGACTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTccccc > 1:1658349/1‑100 (MQ=255) gggTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGgcg < 1:887840/100‑1 (MQ=255) gggTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGATCACGATTCGGCAAAACGGTTTTATTAGCTATCAAAGCTATGTTTCCCCCGgcg < 1:1120825/100‑1 (MQ=255) ggTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGgcgc > 1:1487187/1‑100 (MQ=255) ggTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGgcgc > 2:1940100/1‑100 (MQ=255) gTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCt > 2:768381/1‑100 (MQ=255) gTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCt > 2:109592/1‑100 (MQ=255) ccccAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCTTTTg < 2:1527343/99‑1 (MQ=255) ccccAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCTTTTGa > 1:2001021/1‑100 (MQ=255) | ACGGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCTTTTGA > NC_000913/560454‑560652 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |