| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,019,188 | C→G | 21.9% | G289A (GGT→GCT) | ompA ← | outer membrane protein A (3a;II*;G;d) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,019,188 | 0 | C | G | 21.9% | 195.4 / 53.6 | 91 | G289A (GGT→GCT) | ompA | outer membrane protein A (3a;II*;G;d) |
| Reads supporting (aligned to +/- strand): ref base C (32/39); new base G (13/7); total (45/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.85e-01 | |||||||||||
TCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCAGAACAA > NC_000913/1019089‑1019287 | tCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAc > 2:138054/1‑100 (MQ=255) cGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAcc < 2:365724/100‑1 (MQ=255) gATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCt > 2:1763203/1‑100 (MQ=255) gATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCt > 1:1322570/1‑100 (MQ=255) tCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCttt > 2:2420794/1‑100 (MQ=255) aGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTgg < 1:351867/100‑1 (MQ=255) gTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTgta < 2:2401364/100‑3 (MQ=255) gTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGga < 2:797317/100‑1 (MQ=255) tGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGgag < 1:655591/100‑1 (MQ=255) gcagcaCGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGgaga < 2:987472/100‑1 (MQ=255) gcagcaCGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGgaga > 1:940594/1‑100 (MQ=255) cagcaCGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGAt > 2:2232456/1‑100 (MQ=255) agtaCGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATc < 1:617538/97‑1 (MQ=255) agcaCGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATc < 2:510009/100‑1 (MQ=255) gcaCGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCa < 2:2115878/100‑1 (MQ=255) aCGCTGTTTCACGTTGTCACAGGTGTAGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGTGATCAgn < 1:48489/100‑2 (MQ=255) cTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTaa > 2:2100708/1‑100 (MQ=255) ttCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATcaa > 2:2375828/1‑100 (MQ=255) tCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTTGATTCGCCCATATCACGTGCGGAGATCTTGTCTGCCGGGATACTTTTGGAGATCAGGTAATcaac < 1:806692/100‑1 (MQ=255) cGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCaacaac < 2:2105324/100‑1 (MQ=255) cGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCaacaac < 2:1968473/100‑1 (MQ=255) cGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCaacaac < 2:919034/100‑1 (MQ=255) gTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGAc < 1:206798/100‑1 (MQ=255) gTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGAc > 1:1127704/1‑100 (MQ=255) cacaGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTg > 1:1398633/1‑100 (MQ=255) ggTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCa > 2:2320212/1‑100 (MQ=255) gtTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACgg > 2:631625/1‑100 (MQ=255) tgacAGTAACCGGGTTGGACACACCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGgcg < 1:710938/97‑1 (MQ=255) tGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGgcg > 1:2012095/1‑100 (MQ=255) gCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGgcgc > 2:1231902/1‑100 (MQ=255) gCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGgcgc > 2:551624/1‑100 (MQ=255) gTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACACCAGACTGAGCACGGCGCTCgg > 2:1542343/1‑100 (MQ=255) tAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGa < 2:762050/100‑1 (MQ=255) aaCCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGAc > 1:2528323/1‑100 (MQ=255) aaCCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGAc > 2:1195819/1‑100 (MQ=255) aCCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACa > 1:1209931/1‑100 (MQ=255) aCCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGTACGGCGCTCGGACa < 1:236168/100‑1 (MQ=255) aCCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACa < 2:1567976/100‑1 (MQ=255) aCCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACa > 2:2207228/1‑100 (MQ=255) aCCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACa > 2:2560204/1‑100 (MQ=255) aCCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACa > 1:1003912/1‑100 (MQ=255) ggTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGAcc < 2:1576697/100‑1 (MQ=255) gTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGAccc > 1:1186236/1‑100 (MQ=255) gTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGAccc < 1:1346941/100‑1 (MQ=255) ggATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTgg > 2:1812678/1‑100 (MQ=255) gATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTg > 1:2275003/1‑98 (MQ=255) gATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGt > 1:9942/1‑100 (MQ=255) ttCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTg < 2:2278632/100‑1 (MQ=255) tCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACACTGGTTGt > 1:551577/1‑100 (MQ=255) cGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTa < 1:336808/100‑1 (MQ=255) gCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTaa > 2:2315156/1‑100 (MQ=255) cccATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAg < 1:1544753/100‑1 (MQ=255) ccAGACCACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGc < 1:1478578/100‑1 (MQ=255) cATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCg < 1:1442429/100‑1 (MQ=255) aTACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCg < 2:1325915/99‑1 (MQ=255) tACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTc < 1:246266/100‑1 (MQ=255) tACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTc < 2:962710/100‑1 (MQ=255) aCCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCa < 1:1017651/100‑1 (MQ=255) cACGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGa > 2:1608415/1‑100 (MQ=255) cACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGa > 2:1004660/1‑100 (MQ=255) aCGTGCGGAGATCTTGTCTGCCGGGATCGCTTTGGAGATCAGGTAATCAACCACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTCAGCGTCAGaa > 1:2190361/1‑100 (MQ=255) aCGTGCGGAGATCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGaa < 1:1058194/100‑1 (MQ=255) cGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAAc < 2:2258924/100‑1 (MQ=255) cGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGAt > 1:339375/1‑100 (MQ=255) ggAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATg < 2:9942/100‑1 (MQ=255) gagaTCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGc > 1:1321224/1‑100 (MQ=255) agaTCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcg < 1:2420779/100‑1 (MQ=255) gaTCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcgg > 1:227299/1‑100 (MQ=255) aTCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggt < 1:1916309/100‑1 (MQ=255) aTCTTGTCTGCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggt > 1:2061174/1‑100 (MQ=255) tCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggtc > 2:1726923/1‑100 (MQ=255) tCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggtc > 2:1101437/1‑100 (MQ=255) tCTTGTCTGCCGGGAAACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggtc < 2:2553209/100‑1 (MQ=255) cTTGTCTGCCGGGATACCTTTGGAGCTCATGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggtcg < 1:568742/100‑1 (MQ=255) cTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggtcg < 1:1438143/100‑1 (MQ=255) ttGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggtcgg < 2:2429559/100‑1 (MQ=255) tGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggtcggt < 1:1004657/100‑1 (MQ=255) tGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGcggtcggt > 2:1472822/1‑100 (MQ=255) gTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACCACAGACTGTGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGgtg < 2:188013/100‑1 (MQ=255) gTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCAGTCGgtg < 2:1353026/100‑1 (MQ=255) cTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTa > 2:1604888/1‑100 (MQ=255) gCCGGGATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAAc > 2:1323344/1‑100 (MQ=255) gCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAAc > 2:1124009/1‑100 (MQ=255) gCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAAc > 2:777189/1‑100 (MQ=255) ccGGGATAGCTTTGGCGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAAcc < 2:2556782/100‑1 (MQ=255) cGGGATCGCTTTGAAGATCAGGTAATCAACAACAGACTAAGCAGGGCGCTCGGACAGACCCTTGTTGTAAGGGTCCGCCGCGCTGCGGTCGGTGTa > 1:1601237/1‑96 (MQ=255) cGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAAccc < 2:2391608/100‑1 (MQ=255) gggATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCa > 1:736284/1‑100 (MQ=255) ggATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCAg < 1:1140785/100‑1 (MQ=255) gATAGCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCAGa < 2:56614/100‑1 (MQ=255) gATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCAGa < 2:354038/100‑1 (MQ=255) aTACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCAGaa > 1:1892363/1‑100 (MQ=255) aCCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGCGTAACCCAGaac > 1:874772/1‑99 (MQ=255) ccTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCAGaacaa > 2:540577/1‑100 (MQ=255) ccTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCAGaacaa > 2:2037280/1‑100 (MQ=255) | TCGATCAGTGCAGCACGCTGTTTCACGTTGTCACAGGTGTTGCCAGTAACCGGGTTGGATTCGCCCATACCACGTGCGGAGATCTTGTCTGCCGGGATACCTTTGGAGATCAGGTAATCAACAACAGACTGAGCACGGCGCTCGGACAGACCCTGGTTGTAAGCGTCAGAACCGATGCGGTCGGTGTAACCCAGAACAA > NC_000913/1019089‑1019287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |