| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,100,447 | (T)6→5 | coding (79/1035 nt) | rhaT ← | L‑rhamnose:proton symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,100,442 | 0 | T | . | 93.8% | 369.8 / 17.9 | 96 | coding (84/1035 nt) | rhaT | L‑rhamnose:proton symporter |
| Reads supporting (aligned to +/- strand): ref base T (4/2); new base . (40/50); total (44/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 108 total aligned reads displayed.
AAATTCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATCCT > NC_000913/4100344‑4100536 | aaaTTCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtt < 2:1447407/100‑1 (MQ=255) aaTTCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACttt > 1:1043339/1‑100 (MQ=255) aaTTCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACttt < 2:1948473/100‑1 (MQ=255) aTTCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttt > 1:1978807/1‑100 (MQ=255) ttCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACttttt < 1:2137107/100‑1 (MQ=255) ttCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACttttt < 1:1775120/100‑1 (MQ=255) ttCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACttttt < 2:266918/100‑1 (MQ=255) tCGGTAGTAACAGGGCGCTGCTGGCCCACGGCAGAATATTCCACGAAACAATCCCAGCGACTGACCACATGGTTTCCCATGATCATTTTTTTACtttttg < 2:1725790/100‑2 (MQ=255) cGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttttga < 2:734151/100‑3 (MQ=255) cGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACtttttga < 1:1431815/100‑3 (MQ=255) ggTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAtttttt > 2:1066789/1‑97 (MQ=255) gtagtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGaa > 1:613026/1‑100 (MQ=255) tagtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAACCAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACg < 2:1850608/100‑1 (MQ=255) tagtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACg < 2:1499578/100‑1 (MQ=255) tagtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACg < 1:2751508/100‑1 (MQ=255) agtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACgg < 1:1476760/100‑1 (MQ=255) agtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACgg > 2:2189587/1‑100 (MQ=255) gtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGCCCATTTTTTTAC‑TTTTTGAACGGa > 1:1091391/1‑100 (MQ=255) gtaACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGa > 1:2051083/1‑100 (MQ=255) taACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAg > 2:1933823/1‑100 (MQ=255) taACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAg < 2:2818351/100‑1 (MQ=255) naaCAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTATCCCATGACCATTTTTTTAC‑TTTTTGAACGGAg > 2:2270236/2‑100 (MQ=255) aaCAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATttttttttttttttttcggag > 2:1143943/1‑92 (MQ=255) aCAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGACCGGAGc > 1:800218/1‑99 (MQ=255) aCAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCg < 2:1180269/100‑1 (MQ=255) cAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGt < 1:897164/100‑1 (MQ=255) cgcTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTaaaaa > 1:466821/1‑100 (MQ=255) tGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAg < 2:182119/100‑1 (MQ=255) tGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAg > 1:2235592/1‑100 (MQ=255) aTGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGc < 2:535884/100‑1 (MQ=255) ggCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTg > 1:1090434/1‑100 (MQ=255) gCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATTACCATTTTTTGAC‑TTTTTGAACGGAGCGTAAAAACAGGCttc < 1:1950402/100‑3 (MQ=255) gCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGc < 2:1978793/100‑1 (MQ=255) gCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGc > 2:1389990/1‑100 (MQ=255) cccACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTT‑AACGGAGCGTAAAAACAGGCTGCa > 2:336289/1‑100 (MQ=255) ccACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCan < 2:590729/100‑2 (MQ=255) cACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCAc < 1:1268939/100‑1 (MQ=255) cACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTT‑AACGGAGCGTAAAAACAGGCTGCACt > 2:1727185/1‑100 (MQ=255) aCGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACt < 1:242636/99‑1 (MQ=255) aCGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTg < 1:1782721/100‑1 (MQ=255) ggCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGc < 1:2674512/100‑1 (MQ=255) gCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGcc < 1:2532721/100‑1 (MQ=255) gCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGcc > 1:85558/1‑100 (MQ=255) gCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGcc > 2:1733586/1‑100 (MQ=255) gCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGcc < 1:2629753/100‑1 (MQ=255) gCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTACCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGcc < 2:196842/100‑1 (MQ=255) gAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCcgcg > 2:2785627/1‑100 (MQ=255) aataatCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCgcgc < 1:2688009/100‑1 (MQ=255) ataatCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGcc < 2:1053507/100‑1 (MQ=255) taatCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCg < 2:356964/100‑1 (MQ=255) atCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGAt < 1:490302/100‑1 (MQ=255) tCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATc < 2:1024275/100‑1 (MQ=255) ccACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATc < 2:2582848/100‑1 (MQ=255) ccACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCa > 2:2749295/1‑100 (MQ=255) ccACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCa < 2:1583019/100‑1 (MQ=255) cACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCaa > 1:2696182/1‑100 (MQ=255) cGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAAt < 2:2201705/100‑1 (MQ=255) cAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCaa < 2:418655/100‑1 (MQ=255) aTCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCaaaa > 2:540498/1‑100 (MQ=255) aTCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCaaaa < 1:127152/100‑1 (MQ=255) cACCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATc > 1:1417461/1‑100 (MQ=255) aCCGACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATcc > 1:1909738/1‑100 (MQ=255) gACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCa > 1:416009/1‑100 (MQ=255) gACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCa > 1:416008/1‑100 (MQ=255) gACTGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCa > 2:1661961/1‑100 (MQ=255) tGACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCATAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCg < 2:144251/100‑1 (MQ=255) gACCACATGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGt > 1:1083457/1‑100 (MQ=255) cacaTGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAAt > 2:1610662/1‑100 (MQ=255) cacaTGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAAt > 1:963768/1‑100 (MQ=255) cacaTGGTTTCCCATGACCATTTTTTT‑TTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAAt > 2:2842373/1‑100 (MQ=255) acaTGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATc > 2:2846386/1‑100 (MQ=255) acaTGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATc > 1:305462/1‑100 (MQ=255) caTGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATcg > 1:863670/1‑100 (MQ=255) aTGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATcgc < 2:2696162/100‑1 (MQ=255) tGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTCATcgcg < 2:2452349/100‑1 (MQ=255) tGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATcgcg < 2:601770/100‑1 (MQ=255) tGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATcgcg > 1:125155/1‑100 (MQ=255) tGGTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATcgcg < 1:1843600/100‑1 (MQ=255) gTTTCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGtt > 1:1329642/1‑100 (MQ=255) tttCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTa < 1:1727198/100‑1 (MQ=255) ttCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTAc < 2:2824706/100‑1 (MQ=255) ttCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTAc < 1:1126005/100‑1 (MQ=255) ttCCCATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTAc < 1:780042/100‑1 (MQ=255) ccATGACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCa > 2:2272371/1‑100 (MQ=255) gACCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAACGCCAAAATATCCCCATCGTAATCGCGTTACTCAtctt > 2:1947358/1‑100 (MQ=255) aCCATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAtcttc < 2:816593/100‑1 (MQ=255) ccATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAtcttct < 2:2349257/100‑1 (MQ=255) ccATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCAtcttc < 2:800217/99‑1 (MQ=255) cATTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATcttctt > 1:976045/1‑100 (MQ=255) aTTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTa < 1:2846407/100‑1 (MQ=255) aTTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTa < 2:416007/100‑1 (MQ=255) aTTTTTTTAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTa < 2:416008/100‑1 (MQ=255) tttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATcc < 2:322449/100‑1 (MQ=255) tttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATcc < 2:2430704/100‑1 (MQ=255) tttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATcc < 2:466819/100‑1 (MQ=255) tttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATcc < 1:1389995/100‑1 (MQ=255) tttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATcc < 2:1043337/100‑1 (MQ=255) tttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATcc < 2:1563157/100‑1 (MQ=255) ttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATCCt > 1:527861/1‑100 (MQ=255) ttttAC‑TTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATCCt > 1:527160/1‑100 (MQ=255) | AAATTCGGTAGTAACAGGGCGCTGATGGCCCACGGCAGAATAATCCACGAAACAATCCCACCGACTGACCACATGGTTTCCCATGACCATTTTTTTACTTTTTTGAACGGAGCGTAAAAACAGGCTGCACTGGCCGCGCCGATCAAATGCCAAAATATCCCCATCGTAATCGCGTTACTCATCTTCTTATCCT > NC_000913/4100344‑4100536 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |