BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,212,088	(C)_8→7	intergenic (‑85/+615)	iraM ← / ← ycgX	RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,212,081	0	C	.	100.0%	696.5 / NA	155	intergenic (‑78/+622)	iraM/ycgX	RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (93/62); total (93/62)

Only 100 of 163 total aligned reads displayed.

CAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGATT  >  NC_000913/1211985‑1212176

cAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAcccc                                                                                              >  2:2166066/1‑100 (MQ=255)

 aaTTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAccccc                                                                                             >  1:876252/1‑100 (MQ=255)

  aTTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAccccc                                                                                             >  2:1489582/1‑99 (MQ=255)

      cTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAccccccctca                                                                                        >  1:1272213/1‑97 (MQ=255)

      cTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAccccccctca                                                                                        >  1:395300/1‑97 (MQ=255)

      cTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTAccccccctca                                                                                        >  2:152765/1‑97 (MQ=255)

          ccACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCaaaaa                                                                                   <  1:716267/100‑1 (MQ=255)

           cACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑‑CCCCCCTCaaaaaaa                                                                                 >  2:467781/1‑100 (MQ=255)

            ncTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCTCCTCaaaaaaa                                                                                 >  2:1270859/2‑100 (MQ=255)

            aCTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCaaaaaaa                                                                                 >  2:401994/1‑100 (MQ=255)

             nttCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaat                                                                                >  1:1392690/2‑100 (MQ=255)

             cTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaat                                                                                <  1:427392/100‑1 (MQ=255)

              ttCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaata                                                                               >  2:2203908/1‑100 (MQ=255)

              ttCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaata                                                                               <  2:1368024/100‑1 (MQ=255)

               taaTTTGTTATTTCTTATCCCACGTTATTTAAGATGTTTCGTTAGGATGTTGATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaataa                                                                              <  2:2648354/98‑1 (MQ=255)

                cATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTATGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaataaa                                                                             <  2:1844754/100‑1 (MQ=255)

                 cgatcttATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaataaat                                                                            <  1:2014810/95‑1 (MQ=255)

                 aTTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaataaat                                                                            >  1:2408793/1‑100 (MQ=255)

                  tttGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAaatt                                                                           >  1:1859478/1‑100 (MQ=255)

                   ttGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAaatta                                                                          >  2:1624708/1‑100 (MQ=255)

                   ttGTTATGTCTTATCCCACGGTACTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAaatta                                                                          >  2:1146389/1‑100 (MQ=255)

                    tGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAaattaa                                                                         <  2:781402/100‑1 (MQ=255)

                     gTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAaattaat                                                                        >  1:2631305/1‑100 (MQ=255)

                     gTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAaattaat                                                                        >  1:350829/1‑100 (MQ=255)

                     gTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAaattaat                                                                        >  2:1392003/1‑100 (MQ=255)

                      ttATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAaattaatt                                                                       <  2:2491922/100‑1 (MQ=255)

                       tATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAaaataaatagatcg                                                                      >  2:2014796/1‑94 (MQ=255)

                       tATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAattaatta                                                                      >  1:1353141/1‑100 (MQ=255)

                         tGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTaaa                                                                    >  1:2815036/1‑100 (MQ=255)

                         tGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTaaa                                                                    >  2:808601/1‑100 (MQ=255)

                          gTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTaaaa                                                                   >  2:222045/1‑100 (MQ=255)

                          gTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTATTGATTTTGCATATGAGTATATTA‑‑CCCCCCTCAAAAAAATAAATTAATTAAAat                                                                  <  2:1432465/100‑1 (MQ=255)

                           tCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAat                                                                  >  2:1565490/1‑100 (MQ=255)

                           tCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAat                                                                  >  1:1964557/1‑100 (MQ=255)

                           tCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAat                                                                  >  1:2698073/1‑100 (MQ=255)

                            cTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAatg                                                                 >  1:514806/1‑100 (MQ=255)

                             ttATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAatgt                                                                >  2:2001796/1‑99 (MQ=255)

                                tCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATgg                                                             <  1:118415/100‑1 (MQ=255)

                                 cccACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGc                                                            >  1:126270/1‑100 (MQ=255)

                                  ccACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCt                                                           >  1:1740995/1‑100 (MQ=255)

                                  ccACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCt                                                           >  1:2072136/1‑100 (MQ=255)

                                   cACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCtt                                                          >  1:364734/1‑100 (MQ=255)

                                   cACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCtt                                                          <  1:83689/100‑1 (MQ=255)

                                    aCGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTta                                                         <  2:2665441/100‑1 (MQ=255)

                                          tttAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaa                                                   <  2:166661/100‑1 (MQ=255)

                                          tttAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaa                                                   >  1:1370315/1‑100 (MQ=255)

                                           ttAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaaa                                                  <  1:1753994/100‑1 (MQ=255)

                                            tAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaaat                                                 <  1:892337/100‑1 (MQ=255)

                                            tAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaaat                                                 <  1:2286939/100‑1 (MQ=255)

                                            tAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaaaa                                                 >  2:23148/1‑99 (MQ=255)

                                             aaTATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATataaaaat                                                <  1:23148/100‑3 (MQ=255)

                                                 tGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATaaaataaaat                                            >  1:690141/1‑100 (MQ=255)

                                                 tGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATaaaataaaat                                            >  1:1731753/1‑100 (MQ=255)

                                                  ggTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCTCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATAtaaaataaaa                                             >  2:228988/1‑98 (MQ=255)

                                                  ggTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAAtt                                           >  2:1969750/1‑100 (MQ=255)

                                                   gTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAAttt                                          >  2:2623236/1‑100 (MQ=255)

                                                    ttCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTa                                         >  1:1837297/1‑100 (MQ=255)

                                                     tCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTaa                                        <  2:1181353/100‑1 (MQ=255)

                                                        ttAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGc                                     >  2:1903203/1‑100 (MQ=255)

                                                           ggATGTTTATTTCTTGATTTTGCATATGCGTATATTA‑CTCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAg                                  >  2:1115918/1‑100 (MQ=255)

                                                           ggATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCTCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAg                                  <  2:2031592/100‑1 (MQ=255)

                                                            gATGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAgg                                 <  1:584766/100‑1 (MQ=255)

                                                             aTGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAg                                  <  2:2008491/98‑1 (MQ=255)

                                                             aTGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGa                                >  2:2407536/1‑100 (MQ=255)

                                                              tGTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGaa                               >  2:107078/1‑100 (MQ=255)

                                                               gTTTATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAAt                              <  1:2478856/100‑1 (MQ=255)

                                                                 ttATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAAtct                            <  1:1568836/100‑1 (MQ=255)

                                                                  tATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAgagatcgg                           >  2:1998111/1‑93 (MQ=255)

                                                                  tATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAAtctc                           <  2:1855534/100‑1 (MQ=255)

                                                                  tATTTCTTGATTTTGCATATGAGTATATTA‑CCCCCACTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAAtctc                           <  2:961416/100‑1 (MQ=255)

                                                                   aTTTCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCa                          >  2:475106/1‑100 (MQ=255)

                                                                     ttCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAAt                        <  2:355100/100‑1 (MQ=255)

                                                                      tCTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATg                       <  1:2166079/100‑1 (MQ=255)

                                                                       cTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATgg                      >  2:2574446/1‑100 (MQ=255)

                                                                       cTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATgg                      <  1:983735/100‑1 (MQ=255)

                                                                       cTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATgg                      >  1:794491/1‑100 (MQ=255)

                                                                       cTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATg                       <  2:1964543/99‑1 (MQ=255)

                                                                       cTTGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGAAATCTCAATgg                      >  1:470996/1‑100 (MQ=255)

                                                                        ttGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGa                     <  2:395299/100‑1 (MQ=255)

                                                                        ttGATTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGa                     >  2:1544757/1‑100 (MQ=255)

                                                                           aTTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGt                  >  1:2651766/1‑100 (MQ=255)

                                                                           aTTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGt                  >  1:1784419/1‑100 (MQ=255)

                                                                           aTTTTGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGt                  >  2:645865/1‑100 (MQ=255)

                                                                              ttGCATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTATAGCAAAGAACCACAATTTATGTTaa               >  2:2853771/1‑100 (MQ=255)

                                                                                 cATATGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCACAATGGATGTTAAACa            >  2:1690783/1‑100 (MQ=255)

                                                                                   tatGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATgagatcggaa          >  2:2450193/1‑91 (MQ=255)

                                                                                   tatGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACaaa          >  1:1995772/1‑100 (MQ=255)

                                                                                   tatGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACaaa          >  1:2428234/1‑100 (MQ=255)

                                                                                    atGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACaaaa         >  2:1290339/1‑100 (MQ=255)

                                                                                    atGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACaaaa         <  1:1313121/100‑1 (MQ=255)

                                                                                     tGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAAt        <  1:23722/100‑1 (MQ=255)

                                                                                     tGAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAAt        >  1:654043/1‑100 (MQ=255)

                                                                                      gAGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATg       >  2:302428/1‑100 (MQ=255)

                                                                                       aGTATATTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATga      >  2:2531953/1‑100 (MQ=255)

                                                                                         tataTTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATgaga    <  1:158494/100‑1 (MQ=255)

                                                                                         tataTTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATgaga    >  1:1065098/1‑100 (MQ=255)

                                                                                          ntatTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACaaa          >  2:1126307/2‑93 (MQ=255)

                                                                                          atatTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGAt   >  2:364247/1‑100 (MQ=255)

                                                                                          atatTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGAt   <  1:808602/100‑1 (MQ=255)

                                                                                           tatTA‑CCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGAtt  >  1:2715093/1‑100 (MQ=255)

CAATTACTATCCACTTCATTTGTTATGTCTTATCCCACGGTATTTAATATGGTTCATTAGGATGTTTATTTCTTGATTTTGCATATGAGTATATTACCCCCCCCTCAAAAAAATAAATTAATTAAAATGATGGCTTATATAAAATAAAATTTAAAGCAAGGAATCTCAATGGATGTTAAACAAAATGAGATT  >  NC_000913/1211985‑1212176

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`