| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,757,705 | (T)8→7 | intergenic (+48/+16) | lpp → / ← ldtE | murein lipoprotein/murein L,D‑transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,757,698 | 0 | T | . | 96.7% | 508.6 / 8.9 | 122 | intergenic (+41/+23) | lpp/ldtE | murein lipoprotein/murein L,D‑transpeptidase |
| Reads supporting (aligned to +/- strand): ref base T (4/0); new base . (69/49); total (73/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 135 total aligned reads displayed.
TGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATT > NC_000913/1757600‑1757792 | tGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtt > 2:651006/1‑100 (MQ=255)tGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAtt < 1:2677948/100‑1 (MQ=255) aCGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAtttt < 1:1298093/100‑1 (MQ=255) cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAttttt > 2:2143234/1‑100 (MQ=255) cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAttttt > 2:2821226/1‑100 (MQ=255) gCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAttttt < 2:2587550/99‑1 (MQ=255) gCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAATGTGCGCCAtttttc < 1:1778661/100‑2 (MQ=255) aGCTGGTGCTAACCAGCGTTTGGACAAGATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtttttttg < 2:2307040/100‑2 (MQ=255) aGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtttttttg < 2:221420/100‑2 (MQ=255) gCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtttttttgt > 1:2140355/1‑98 (MQ=255) cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtttttttgtc < 2:2040744/100‑4 (MQ=255) cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtttttttgtc > 1:712473/1‑97 (MQ=255) tCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCAtttttttgtct > 1:1035606/1‑96 (MQ=255) gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGcc > 1:2212129/1‑100 (MQ=255) gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCg < 1:2066326/100‑1 (MQ=255) cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGt < 2:1801001/100‑1 (MQ=255) tAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGtt < 1:1442226/100‑1 (MQ=255) tAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGtt > 2:1329681/1‑100 (MQ=255) aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGttt < 2:270464/100‑1 (MQ=255) ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTAc > 2:2425596/1‑100 (MQ=255) ccAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTAc < 2:532652/100‑1 (MQ=255) aGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCg > 1:1495115/1‑100 (MQ=255) aGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCg < 2:1609816/100‑1 (MQ=255) gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGc > 1:345601/1‑100 (MQ=255) gTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTa < 1:1012481/100‑1 (MQ=255) cTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACt > 1:965113/1‑100 (MQ=255) tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTg > 2:1857291/1‑100 (MQ=255) ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGc > 1:602793/1‑100 (MQ=255) ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGc < 2:305381/100‑1 (MQ=255) acaacaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGt < 1:2482476/100‑1 (MQ=255) cttccgatctactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTc < 1:1456984/92‑1 (MQ=255) aacaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCa < 1:371318/100‑1 (MQ=255) acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAc > 2:922573/1‑100 (MQ=255) caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGAACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcg > 1:1179085/1‑100 (MQ=255) tGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg > 1:2413857/1‑100 (MQ=255) gCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTa > 2:2313927/1‑100 (MQ=255) tactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAAc < 1:885287/100‑1 (MQ=255) actaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACa < 2:2140342/100‑1 (MQ=255) ctaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACat > 1:598199/1‑100 (MQ=255) ctaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACat > 2:2279786/1‑100 (MQ=255) ctaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACat < 1:437159/100‑1 (MQ=255) aTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTc < 2:2484921/100‑1 (MQ=255) aTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTc > 1:2870598/1‑100 (MQ=255) tACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTcc < 2:2106837/100‑1 (MQ=255) tACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTcc > 1:2283741/1‑100 (MQ=255) aCCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc > 1:1231817/1‑100 (MQ=255) cGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCTGTTTACCGCTACTGCGTCACGCGTAACATATTCCCtt > 2:1078732/1‑100 (MQ=255) cGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCtt < 1:2240385/100‑1 (MQ=255) cGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCtt < 2:1423796/100‑1 (MQ=255) gCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTg < 2:193890/100‑1 (MQ=255) gCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTg < 1:208696/100‑1 (MQ=255) gCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTg > 1:2829348/1‑100 (MQ=255) gCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTg < 1:2320703/100‑1 (MQ=255) aaGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGct < 1:2425612/100‑1 (MQ=255) gTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGctct > 2:2448067/1‑100 (MQ=255) gTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGctct < 1:257062/100‑1 (MQ=255) gTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGctct < 1:2762799/100‑1 (MQ=255) aaTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTgg > 1:1166584/1‑100 (MQ=255) aTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGt < 2:226672/100‑1 (MQ=255) tAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGtt > 2:2687406/1‑100 (MQ=255) gTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCa > 1:796232/1‑100 (MQ=255) gTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCa > 1:324035/1‑100 (MQ=255) gTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCa > 2:1414574/1‑100 (MQ=255) tACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCAc < 1:2670945/100‑1 (MQ=255) tACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCAc < 1:809315/100‑1 (MQ=255) tACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCAc < 2:1035604/100‑1 (MQ=255) tACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCAc < 2:1297545/100‑1 (MQ=255) aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCAcc < 1:2170632/100‑1 (MQ=255) aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCAcc > 1:1206553/1‑100 (MQ=255) ccTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCGTGCTCTGGTTCACCa > 1:2850776/1‑100 (MQ=255) gcagacaaaaaaaTGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTc > 1:2537835/9‑100 (MQ=37) gaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTT‑TCTTCTTTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCtt > 2:86263/1‑99 (MQ=255) gaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTg < 1:1329686/100‑1 (MQ=255) agacaaaaaaaTGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTg > 1:695423/7‑100 (MQ=38) gtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTgcgc > 1:2048925/1‑100 (MQ=255) naaaaaTGGCCCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTg > 2:2035864/2‑100 (MQ=255) gaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTg > 1:842562/1‑100 (MQ=255) gaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTg < 1:2789554/100‑1 (MQ=255) gaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTg > 2:1538442/1‑100 (MQ=255) aaaaaaTGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTg > 1:2471094/2‑100 (MQ=255) aaaTGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGAct < 1:1322871/100‑1 (MQ=255) aaaTGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGAct > 1:1715174/1‑100 (MQ=255) aaTGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGActc > 2:712963/1‑100 (MQ=255) aTGGCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGActct > 2:1558345/1‑100 (MQ=255) aTGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGActct > 1:1842343/1‑100 (MQ=255) aTGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGActct > 1:484946/1‑100 (MQ=255) aTGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGActct > 1:253384/1‑100 (MQ=255) tGGCGCACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTa > 1:2667577/1‑100 (MQ=255) ggCGCACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTAc < 1:861598/100‑1 (MQ=255) gcgcACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACt > 1:1271497/1‑100 (MQ=255) gcgcACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACt > 2:1304939/1‑100 (MQ=255) cgcACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTg > 1:1172247/1‑100 (MQ=255) gcACATTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGa < 2:1265553/100‑1 (MQ=255) gcACAATGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGa > 1:514578/1‑100 (MQ=255) cacaTTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGaa < 1:2451787/100‑1 (MQ=255) cacaTTGTGCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGaa > 2:2837488/1‑100 (MQ=255) ttGTGCGCCA‑TTTTTTTGTCTGACGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGa > 2:2295295/1‑95 (MQ=255) gtgCGCCATTTTTTTT‑TCTTTCTTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGgcgc > 2:1143520/1‑99 (MQ=255) gtgCGCCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGCGCa > 1:1048898/1‑100 (MQ=255) gcgcCA‑TTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGCGCAtt > 1:597795/1‑100 (MQ=255) | TGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCATTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCTCTGGTTCACCATTCTGCGCTGACTCTACTGAAGGCGCATT > NC_000913/1757600‑1757792 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |