| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,517,951 | (C)6→7 | coding (285/522 nt) | fecI ← | RNA polymerase sigma‑19 factor, fec operon‑specific; ECF sigma factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,517,945 | 1 | . | C | 88.5% | 248.4 / 25.2 | 78 | coding (291/522 nt) | fecI | RNA polymerase sigma‑19 factor, fec operon‑specific; ECF sigma factor |
| Reads supporting (aligned to +/- strand): ref base . (6/3); new base C (39/30); total (45/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.26e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑CCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCAG > NC_000913/4517846‑4518041 | cAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑t > 1:721630/1‑100 (MQ=255)cAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGGTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑t > 1:2551971/1‑100 (MQ=255) aGAAACGCGTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑c > 2:538641/1‑100 (MQ=255) gAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑cc > 2:2491913/1‑100 (MQ=255) gAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑cc < 1:2535996/100‑1 (MQ=255) aCGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTGGCGTTCCTCAGGTGAAGGCG‑C‑T‑ccc‑cc < 2:481981/100‑1 (MQ=255) gCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑ccc‑cccc > 1:1689121/1‑99 (MQ=255) cTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑ccc‑cccct > 1:2410966/1‑98 (MQ=255) tCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑ccc‑cccctcc < 1:297534/100‑5 (MQ=255) cACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑ccc‑cccctccg > 2:1268457/1‑95 (MQ=255) aCGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCgg < 2:879957/100‑1 (MQ=255) aCGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCgg < 2:2793117/100‑1 (MQ=255) aCGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCgg > 2:1859903/1‑100 (MQ=255) aCGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCgg < 1:371838/100‑1 (MQ=255) cGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGc > 1:1711469/1‑100 (MQ=255) cGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGc < 2:2306059/100‑1 (MQ=255) gtgtTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCa < 1:225249/100‑1 (MQ=255) tgtTTTGCTGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCAt > 1:1546055/1‑100 (MQ=255) gtTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATa > 2:441728/1‑100 (MQ=255) gtTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATa > 1:2435660/1‑100 (MQ=255) gCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAgcgc > 2:250990/1‑100 (MQ=255) ccGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGcc < 1:924452/100‑1 (MQ=255) gTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAg < 1:2109421/100‑1 (MQ=255) tttAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCatc < 1:1950287/100‑3 (MQ=255) tttAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGc < 2:1492439/100‑1 (MQ=255) aGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAgatcggaagag > 2:66602/1‑90 (MQ=255) aGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCAtc > 2:336475/1‑100 (MQ=255) gCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCAtct > 2:1314804/1‑100 (MQ=255) gCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCAtct > 1:952448/1‑100 (MQ=255) gtatctggagaTGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCAtctc < 2:288081/90‑1 (MQ=255) ccGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTcc < 2:1595251/100‑1 (MQ=255) gTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAg < 2:827590/100‑1 (MQ=255) gTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAg < 1:829195/100‑1 (MQ=255) cAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATa < 1:1266661/100‑1 (MQ=255) aGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATAc > 2:2171759/1‑100 (MQ=255) gCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACg < 1:446104/100‑1 (MQ=255) cTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCtttt < 1:2187340/100‑1 (MQ=255) cTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCtttt > 2:1050017/1‑100 (MQ=255) gTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑CCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTcc > 1:2795253/1‑100 (MQ=255) tCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTcc < 2:721628/100‑1 (MQ=255) cGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCa > 2:865790/1‑100 (MQ=255) cGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCa > 2:2867099/1‑100 (MQ=255) aggagTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCGCAGGTGAAGGCG‑C‑T‑CCCACCCTCCGGCATAAGCGCCAGCATCTCCAGATACCCTTTTTCCAgc > 2:1249781/1‑100 (MQ=255) ggagTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAgcg > 2:2809841/1‑100 (MQ=255) agTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGcgcg < 2:79350/100‑1 (MQ=255) gTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGt > 2:598022/1‑100 (MQ=255) gTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGt > 2:2321937/1‑100 (MQ=255) tGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGttt > 1:44251/1‑100 (MQ=255) tAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCg < 2:1842172/100‑1 (MQ=255) gTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGa > 1:268404/1‑100 (MQ=255) gTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGa > 2:2211680/1‑100 (MQ=255) gTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGa > 2:2243123/1‑100 (MQ=255) gTCTCGAGTTGGCGTTCGCGTTCCTCAGGTGAAGGCG‑CAC‑CCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGa > 2:1785238/1‑100 (MQ=255) ctcGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGaaa > 2:739432/1‑100 (MQ=255) ctcGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGaaa < 2:2003544/100‑1 (MQ=255) tcGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAAc > 1:2312726/1‑100 (MQ=255) cGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACa < 1:2243136/100‑1 (MQ=255) gTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGt > 1:506854/1‑100 (MQ=255) ttGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTc < 1:2577541/100‑1 (MQ=255) tGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGCCGAAAcgcgctg < 2:1689108/100‑7 (MQ=255) ggCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTcca > 1:612338/1‑100 (MQ=255) ggCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTcca > 1:2489227/1‑100 (MQ=255) cTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTccacc > 1:1339481/1‑100 (MQ=255) cTTTCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTccacc < 1:250991/100‑1 (MQ=255) cTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑CCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTccacca > 1:1290696/1‑100 (MQ=255) ttCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCAt < 1:1314809/100‑1 (MQ=255) tCGCGTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATc > 1:223794/1‑100 (MQ=255) cgcgTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAACATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCa > 1:2642419/1‑100 (MQ=255) gcgTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCAc > 2:1094126/1‑100 (MQ=255) gcgTTCCTCAGGTGAAGGCG‑C‑T‑CCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCAcg > 2:1985306/1‑100 (MQ=255) gTTCCTCAGGTGCCGGCGCC‑C‑CCC‑CCCTCCGGCATCAGCGACAGCATCTCCAGCTCCGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCa < 2:2410950/97‑1 (MQ=255) gTTCCTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCAcgc > 1:2185183/1‑100 (MQ=255) ccTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGtt > 1:1697069/1‑100 (MQ=255) cTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGttt > 2:2074474/1‑100 (MQ=255) cTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGttt < 2:506852/100‑1 (MQ=255) cTCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGtt > 1:485343/1‑99 (MQ=255) tCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTg < 2:2185170/100‑1 (MQ=255) tCAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTg > 1:547122/1‑100 (MQ=255) cAGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTgg < 1:441729/100‑1 (MQ=255) aGGTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGc < 2:1711456/100‑1 (MQ=255) ggTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCg > 1:1207263/1‑100 (MQ=255) ggTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCg > 2:293777/1‑100 (MQ=255) gTGAAGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGa > 1:818040/1‑100 (MQ=255) ttccgatc‑T‑CCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAg < 1:479159/93‑1 (MQ=255) aaGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAg > 2:567130/1‑100 (MQ=255) aaGGCG‑C‑TCCCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAg < 2:1808640/100‑1 (MQ=255) ggCG‑C‑T‑ACC‑CCCTCCGGCATATGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGAt < 2:2727344/95‑1 (MQ=255) cg‑c‑T‑CCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCag > 1:1081297/1‑100 (MQ=255) | CAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTGTCGAGGAGTTGTAGGGTCTCGAGTTGGCTTTCGCGTTCCTCAGGTGAAGGCG‑C‑T‑CCC‑CCCTCCGGCATAAGCGCCAGCATCTCCAGATACGCTTTTTCCAGCGCGTTTCGGCGAAACAGGTCCACCATCACGCGTTTGGCGATAGTGCAG > NC_000913/4517846‑4518041 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |