| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 705,972 | (T)9→10 | intergenic (+82/‑121) | nagE → / → glnS | N‑acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components/glutamyl‑tRNA synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 705,963 | 1 | . | T | 93.4% | 293.5 / 12.4 | 91 | intergenic (+73/‑130) | nagE/glnS | N‑acetyl glucosamine specific PTS enzyme IIC, IIB, and IIA components/glutamyl‑tRNA synthetase |
| Reads supporting (aligned to +/- strand): ref base . (3/3); new base T (48/37); total (51/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 105 total aligned reads displayed.
GCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCA > NC_000913/705869‑706053 | gCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt > 1:2174574/1‑100 (MQ=255) cTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑t < 2:286261/100‑1 (MQ=255) tATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑t < 1:2693698/100‑1 (MQ=255) aTGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑tt < 2:656472/100‑2 (MQ=255) tGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑ttc < 2:2337130/100‑3 (MQ=255) gAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑tttc > 2:494790/1‑97 (MQ=255) gAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑ttca < 2:789799/100‑4 (MQ=255) aaaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑ttcat < 2:2692987/100‑5 (MQ=255) aaaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑ttcat > 1:2340945/1‑96 (MQ=255) aaTCAAAAAGTAATCTGCTTTATGCCTGATGTGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑ttcatc < 2:1812954/100‑6 (MQ=255) aaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑ttcatc > 1:2244480/1‑95 (MQ=255) aaTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑ttcatc < 1:1332969/100‑6 (MQ=255) aTCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑tcatca > 1:41699/1‑100 (MQ=255) tCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACTAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCatcaa < 2:493131/100‑1 (MQ=255) cAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGTATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCatcaat > 1:1338207/1‑100 (MQ=255) cAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCatcaat > 1:1433914/1‑100 (MQ=255) cAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑TT‑TTT‑TTT‑ttat > 2:2506494/1‑95 (MQ=255) aaaaaGTAATCTGCTTTATGCCTGATTCGTCGTTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCatcaatc < 1:997560/100‑1 (MQ=255) aaaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCatcaatc > 1:1204279/1‑100 (MQ=255) aaaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCatcaatc > 1:2632692/1‑100 (MQ=255) aaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCttcaatca > 2:2052840/1‑100 (MQ=255) aaaaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑tt‑ttt‑ttt‑tttttttat > 2:2283732/1‑90 (MQ=255) aaGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCTTCAatcatc > 2:1040552/1‑100 (MQ=255) aGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATcc < 2:1594087/100‑1 (MQ=255) tCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATa > 1:1003448/1‑100 (MQ=255) cTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATaa > 1:422665/1‑100 (MQ=255) gCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TTTTCTATTATCCCCATAAt > 2:2486448/1‑99 (MQ=255) tttATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCt < 2:310639/100‑1 (MQ=255) taggtatGATGGGACGCTGGAGAGTTGAATCCAAAAGTGACAAGCGGTGGAGATCTTCTCCGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATCATCCTTg < 2:1206021/94‑1 (MQ=255) tATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGTCAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTg < 2:583118/100‑1 (MQ=255) tATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTg < 2:1384964/100‑1 (MQ=255) aggCCAGATACGACGCTTGAACATCGCATAAAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTg < 2:732604/97‑1 (MQ=255) aTGCCTGATGCGGCGCGTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGt < 2:2527480/100‑1 (MQ=255) aTGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGt < 2:1102115/100‑1 (MQ=255) tGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCTTTT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCtt > 2:2467372/1‑98 (MQ=255) tGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGtt < 2:2174561/100‑1 (MQ=255) ccTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCCTAATCCTTGtt > 2:1483411/1‑98 (MQ=255) ccTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAg > 1:168274/1‑100 (MQ=255) ccTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGa > 2:165443/1‑100 (MQ=255) cTGGTGCGACGATTGAAAATCGTATCCAACAATGACCAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTa < 1:1290902/98‑1 (MQ=255) cTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGa < 2:2083498/100‑1 (MQ=255) cTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGa > 2:2007263/1‑100 (MQ=255) cTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGa < 2:2503638/100‑1 (MQ=255) cTGATGAGACGCTTGAGCGTCGCATCCAACAATGACTAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGa < 2:1051654/100‑1 (MQ=255) ggATGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAAACATCCCCAAAATCCTTTTTa > 1:1337206/2‑97 (MQ=37) gATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCCATCATCCCCATAATCCTTGTTAGCtt > 1:238298/1‑100 (MQ=255) gATGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCTTTT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGAt > 1:1489820/1‑100 (MQ=255) gATGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TTATTTATCATCCCCATAATCCTTGTTAGAtt > 2:2828966/1‑100 (MQ=255) gATGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGAtt > 1:1865674/1‑100 (MQ=255) gATGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGAtt > 2:874211/1‑100 (MQ=255) aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TTATCAATCATCCCCATAATCCTTGTTAGAtt > 2:2491325/1‑99 (MQ=255) aTGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTa < 2:490047/100‑1 (MQ=255) aTGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCTTTT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGAtt > 1:270742/1‑100 (MQ=255) aTGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGAtt > 2:888367/1‑99 (MQ=255) aTGCGACGCTCAAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTa > 2:2581003/1‑100 (MQ=255) tGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TAATTAATTATTCTTTTTATCCTTTTTAGATTa > 2:620995/1‑99 (MQ=255) gCGACGCTTGAGCGTCGCATCAAAAAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTa < 2:2268445/98‑1 (MQ=255) gggcGCTTGGGCGTTGAATACAAAATTGATTGGCGGTGGGGATCTTCTCTGCGGTT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCa < 2:2412766/97‑1 (MQ=255) cGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCa > 1:377022/1‑100 (MQ=255) actattaaGCGTCTCATCCAACAATGTCAAGCGTCGGAGATCTTCTCTGCCGC‑‑TT‑TTTGTTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCa < 2:988874/91‑1 (MQ=255) cTTGAGCGTCGAATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑TT‑TTT‑TTTATCATCAATCATCCCCATAATCCTTGTTAGATTATCAAtttt < 2:1577733/100‑1 (MQ=255) ttGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTTTTAGATTATCAATTTTa > 1:1864338/1‑100 (MQ=255) ttGAGCCTCGCATCCAAAAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTa < 2:2007655/100‑1 (MQ=255) tGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaa > 1:937948/1‑100 (MQ=255) tGAGCGTCGCATCCAAAAATGACGAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaa < 1:1040554/100‑1 (MQ=255) gAGCGTCGCATCCAACAATGACAATCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaa < 2:1341631/100‑1 (MQ=255) gAGCGTCGCATCCAACAATGACAAGCAGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTaaa < 2:1341513/100‑1 (MQ=255) gTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAAc > 1:339674/1‑100 (MQ=255) tCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TTTTTTATTTTTTCCTTAATCCTTGTTTGATTATCAATTTTAAAAAACt > 2:653535/1‑100 (MQ=255) cATCCAACAATGACGAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAAc < 1:2491341/100‑1 (MQ=255) aTCCAACAATGAAAAGCGGTAGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAAc < 2:1061299/99‑1 (MQ=255) tCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAg > 1:1782064/1‑100 (MQ=255) ccAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGt > 1:1238608/1‑100 (MQ=255) ccAACAATGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGt > 1:1442507/1‑100 (MQ=255) caaaaaaTGACAAGCGGTGGAGATCTTCTCTCCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAAc < 2:1864325/92‑1 (MQ=255) caacaaTGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGtt > 1:1542631/1‑100 (MQ=255) aacaaTGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCACTCATCCCCATAATCCTTGTTAGATTATCACTTTTAAAAAACTAACAGtt > 1:1686446/1‑99 (MQ=255) aacaaTGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTg > 1:1556255/1‑100 (MQ=255) acaaTGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGt > 1:2123311/1‑100 (MQ=255) acaaAGCCAAGCGGTGGAGATTTTCTTTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAGAAACTAACAGtt < 2:1063403/98‑1 (MQ=255) aaTGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCa > 1:1699419/1‑100 (MQ=255) tGACAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGc > 1:2761832/1‑100 (MQ=255) gACAAGCGGTGGAAATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTc < 2:1338202/96‑1 (MQ=255) aCAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGcc < 2:1436878/99‑1 (MQ=255) cAAGCGGTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTg > 1:1609425/1‑100 (MQ=255) cGGTGGAGATCTACTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTcc < 1:757955/99‑1 (MQ=255) gTGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGc < 2:2841271/100‑1 (MQ=255) tGGAGATCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCt > 1:553866/1‑100 (MQ=255) agaTCTTCTCTGCCGCTTTT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCtt < 2:1489813/99‑1 (MQ=255) agaTCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TTATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTACCGCTtat > 2:1226449/1‑100 (MQ=255) gaTCTTCTCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTtata > 1:1447388/1‑100 (MQ=255) tcttctCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAg > 1:550426/1‑100 (MQ=255) cttctCTGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGa > 1:1656290/1‑100 (MQ=255) ttctCTGCCGC‑‑TT‑TTT‑TTT‑TCATCAATAATACCCATAATCCTTGTTATCTTATCAATTTTAAAAAACTAACAGTTGTTAGTCTGTCACTCTTATAAGAt > 2:716930/1‑99 (MQ=255) tccccggCCGC‑‑TTATTT‑TAT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAAGTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGAt < 1:588771/94‑1 (MQ=255) ctctGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGAt < 1:1500588/98‑1 (MQ=255) ctctGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATc < 1:2856622/99‑1 (MQ=255) ctctGCCGCT‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCa < 2:1821603/100‑1 (MQ=255) tctGCCGCTTTT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGAt < 2:1820953/98‑1 (MQ=255) ccgCCGCT‑TT‑TTT‑TTT‑TCATCAATCCACCCCATCATCATTGTTAGATTATCAATCTTAAAAAACTAACAGTTGTCAGCCGGTCCCGCTTATAAGATc < 2:238297/95‑1 (MQ=255) | GCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGCTTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCTCTGCCGC‑‑TT‑TTT‑TTT‑TCATCAATCATCCCCATAATCCTTGTTAGATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCA > NC_000913/705869‑706053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |