| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 160,864 | (C)6→7 | coding (623/705 nt) | sfsA ← | sugar fermentation stimulation protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 160,858 | 1 | . | C | 97.8% | 317.8 / ‑0.7 | 91 | coding (629/705 nt) | sfsA | sugar fermentation stimulation protein A |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (41/48); total (42/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 108 total aligned reads displayed.
AAATTAACCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑CCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATGCAGCA > NC_000913/160759‑160948 | aaaTTTACCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑a > 2:2362087/1‑100 (MQ=255)aaaTTTACCAGTTACTTACTTTACTACAATGTAACCGGCAGCGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑a > 2:2356319/1‑100 (MQ=255)aaaTTAACCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑a < 2:2765271/100‑1 (MQ=255)aaaTTAACCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑a > 1:1452543/1‑100 (MQ=255) aTTAACCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑cc > 1:1385651/1‑100 (MQ=255) aaCCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑ccccc > 1:984450/1‑100 (MQ=255) aCCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑cccccc > 2:274610/1‑100 (MQ=255) aCCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑cccccc < 2:2665070/100‑1 (MQ=255) aCCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑cccccc < 1:914016/100‑1 (MQ=255) ccAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑ccccccc > 1:591797/1‑99 (MQ=255) aGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑ccccccctc < 1:1054320/100‑4 (MQ=255) aGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑ccccccctc > 1:1035881/1‑97 (MQ=255) aGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑ccccccctc < 1:370643/100‑4 (MQ=255) gTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCAATGCCTTCAGCAGAAATTTCAGCTTTGTAAGCCAGAATTTCT‑A‑ccccccctct > 2:2307199/1‑96 (MQ=255) ttacttacTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑ccccccctctg < 1:1488268/100‑6 (MQ=255) tacttactTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGt > 2:427427/1‑100 (MQ=255) tacttactTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGt > 1:470546/1‑100 (MQ=255) ctcttccgatctacAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑CCCCCCTCTGTTg < 2:771889/90‑1 (MQ=255) acttacttTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGtt > 2:1128284/1‑100 (MQ=255) cttacttTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTg < 1:2181872/100‑1 (MQ=255) cttacttTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTg < 1:508583/100‑1 (MQ=255) cttacttTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTg > 1:875878/1‑100 (MQ=255) cttacttTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCGTTTTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTg < 2:1899276/100‑1 (MQ=255) ttactttactACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGa < 1:2624133/100‑1 (MQ=255) ttactttactACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGa < 1:2530886/100‑1 (MQ=255) ctttactACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCt > 1:1629966/1‑100 (MQ=255) ctttactACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCt > 1:1939139/1‑100 (MQ=255) tactacAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCt < 2:2385002/100‑1 (MQ=255) ctacAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGa > 1:2278727/1‑100 (MQ=255) ctacAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGa > 1:2266779/1‑100 (MQ=255) ctacAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGa > 1:1031491/1‑100 (MQ=255) tacAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGAc > 1:2559425/1‑100 (MQ=255) tacAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGAc < 1:2857148/100‑1 (MQ=255) aaTGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAAt < 1:138524/100‑1 (MQ=255) aTGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATa < 2:1031489/100‑1 (MQ=255) gTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTACGCTTTGTAAGCAAGAATTTCTCC‑CCCCCCTCTCTTGAGCTTCTCACAATTGt > 2:2440109/1‑100 (MQ=255) tAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGtt > 1:1012381/1‑100 (MQ=255) ccGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTgcg < 2:307491/100‑1 (MQ=255) cGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTgcgc < 1:760808/100‑1 (MQ=255) ggCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGcgcg > 1:2299573/1‑100 (MQ=255) cAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTa < 1:1086571/100‑1 (MQ=255) gATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTtc < 1:698962/100‑1 (MQ=255) aTTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTtct < 2:1040340/100‑1 (MQ=255) ttttttAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTtctc > 2:2139606/1‑100 (MQ=255) ttttttAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTtctc > 1:2465968/1‑100 (MQ=255) ttttAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCAt > 2:752653/1‑100 (MQ=255) tttAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATc < 2:1515935/100‑1 (MQ=255) tttAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATc < 2:1601043/100‑1 (MQ=255) tttAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATc < 2:1800818/100‑1 (MQ=255) ttAAGAGCCATGGCTTCAGCATAAATGTCTTTTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCAt < 2:1722721/98‑1 (MQ=255) tAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGa > 2:1535312/1‑100 (MQ=255) agagCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGAtg < 1:360328/100‑1 (MQ=255) agagCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGAtg < 2:2278714/100‑1 (MQ=255) gCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTgg > 2:334546/1‑100 (MQ=255) gCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTgg > 1:514538/1‑100 (MQ=255) cATGCATTCAACAGTAATTCCCGCTGTGTAAGCCACAATTTCT‑ACCCCCCCGCTCTTTAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGAtgt < 2:2221980/96‑1 (MQ=255) aTGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGgcg < 1:1729545/99‑1 (MQ=255) tGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGgcgcg > 2:1210018/1‑100 (MQ=255) gCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGgcgcgc > 2:2879034/1‑100 (MQ=255) ccTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGcgcgcg < 2:374557/100‑1 (MQ=255) cTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCgg > 2:2149800/1‑100 (MQ=255) cTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCgg < 1:2079657/100‑1 (MQ=255) cTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCgg > 2:2181628/1‑100 (MQ=255) cTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCgg > 1:1011622/1‑100 (MQ=255) ttCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCggg < 1:2588598/100‑1 (MQ=255) ttCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCggg < 1:2681086/100‑1 (MQ=255) cagcagAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTg < 1:909359/100‑1 (MQ=255) cagcagAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTg < 1:2362102/100‑1 (MQ=255) cagcagAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTg < 1:2356334/100‑1 (MQ=255) agcagAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGa > 2:1051936/1‑100 (MQ=255) agAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGaaaa < 1:1533140/100‑1 (MQ=255) agAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGaaaa > 1:326284/1‑100 (MQ=255) gAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAAc < 2:1317509/100‑1 (MQ=255) gAAATTTCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAAc < 1:2377636/100‑1 (MQ=255) tttCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCgtg < 1:2695723/100‑1 (MQ=255) tttCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCgtg < 2:1263499/100‑1 (MQ=255) tttCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCgtg < 1:2499083/100‑1 (MQ=255) ttCCGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCgtgt > 2:2363583/1‑100 (MQ=255) ccGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTaa > 2:483869/1‑100 (MQ=255) ccGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTaa > 2:29207/1‑100 (MQ=255) ccGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTa > 2:1621506/1‑99 (MQ=255) cGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAAt < 1:344342/100‑1 (MQ=255) cGCTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAAt < 2:1310376/100‑1 (MQ=255) cTTTGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATgg > 1:1641083/1‑100 (MQ=255) ttGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCt < 1:2228388/100‑1 (MQ=255) tGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAACCCGTGTAATGGCt > 2:1508814/1‑99 (MQ=255) tGTAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTg < 1:2879055/100‑1 (MQ=255) tAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTTTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGaa > 2:2033607/1‑100 (MQ=255) tAAGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGaa > 1:487027/1‑100 (MQ=255) aaGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAAt < 1:77956/100‑1 (MQ=255) aGCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATg > 1:2288936/1‑100 (MQ=255) gCCAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgc > 1:2131511/1‑100 (MQ=255) ccAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgca > 2:2389903/1‑100 (MQ=255) ccAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgca < 2:2539543/100‑1 (MQ=255) cAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgcag > 1:934421/1‑100 (MQ=255) cAGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgcag > 2:1961382/1‑100 (MQ=255) aGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgcagc > 1:1454529/1‑100 (MQ=255) aGAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgcagc < 1:2327764/100‑1 (MQ=255) gAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgcagca < 1:1472926/100‑1 (MQ=255) gAATTTCT‑ACCCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATgcagca < 1:2718591/100‑1 (MQ=255) | AAATTAACCAGTTACTTACTTTACTACAATGTAACCGGCAGTGATTTTTTAAGAGCCATGCCTTCAGCAGAAATTTCCGCTTTGTAAGCCAGAATTTCT‑A‑CCCCCCTCTGTTGAGCTTCTGACAATAGTTGCGCGTATTTCTCATCGATGTGGCGCGCGGGTGAAAACCGTGTAATGGCTGAATGCAGCA > NC_000913/160759‑160948 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |