| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,185,875 | (G)7→8 | intergenic (‑79/‑42) | rcnR ← / → rcnA | transcriptional repressor of rcnA/membrane protein conferring nickel and cobalt resistance |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,185,868 | 1 | . | G | 84.9% | 210.8 / 32.3 | 73 | intergenic (‑72/‑49) | rcnR/rcnA | transcriptional repressor of rcnA/membrane protein conferring nickel and cobalt resistance |
| Reads supporting (aligned to +/- strand): ref base . (1/10); new base G (57/5); total (58/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.93e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑G‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGT > NC_000913/2185769‑2185959 | tCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACt > 2:1715807/1‑100 (MQ=255) gTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g > 1:2516146/1‑100 (MQ=255) ttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑gg > 2:2662869/1‑100 (MQ=255) ttATCACAAATAGTATGAGACATGGCAACTCCTGGTTAAAAAAAAAAAAAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g < 2:367570/98‑1 (MQ=255) tATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCATTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑ggg < 2:2731175/100‑1 (MQ=255) aTCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑gggg > 1:2283239/1‑100 (MQ=255) aTCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑gggg < 2:2166615/100‑1 (MQ=255) aTCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATATACTGGGGGCTAGTACCAGCC‑ACT‑gcaggg > 1:530743/1‑94 (MQ=255) tCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑ggggg > 1:2315086/1‑99 (MQ=255) cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑ggggga > 2:2759057/1‑98 (MQ=255) cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑ggggga > 2:2131589/1‑98 (MQ=255) cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑ggggga > 1:115372/1‑98 (MQ=255) acgaaatGTATGAAACACGGCAACACCTGGTTAAAAAGAAAAAGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑ggggga < 2:1769302/93‑3 (MQ=255) cGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑gggggagt > 2:1320099/1‑96 (MQ=255) ggATTGTAGGAGACAGGTCAACAGCTGGTTAACAAGAAGATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑ggggga < 2:1807920/97‑3 (MQ=255) gATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAg > 1:1473291/1‑100 (MQ=255) gATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAg > 1:28246/1‑100 (MQ=255) aTTGTATGAGACATGGAAAAACCGGATTAACAAGAATATGAAAAATCATAGCACTATTAATCTGCTGGGGGGTAGTATCAGGT‑ACT‑g‑‑g‑g‑gggggagta < 2:2245346/98‑6 (MQ=255) gTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATc > 2:1869773/1‑100 (MQ=255) gTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATc > 1:1615675/1‑100 (MQ=255) tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCa > 2:518533/1‑100 (MQ=255) tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCa > 1:1778368/1‑100 (MQ=255) gtGAGAAATGGCACCACAGAGTTAACAAGAATATGAATACTCATAGCTCTATTAATCAACTGGGTGGTAGTATCAGGT‑ACT‑G‑‑GAG‑GGGG‑AGTAGAATCAg < 2:1298890/99‑1 (MQ=255) aTGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAg > 1:1158949/1‑100 (MQ=255) tGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGa > 2:595076/1‑100 (MQ=255) gagaCATGTGAACACATGGTTAACAAAAATATGAAAAATTATAGCAGTATGAAGAGACAGGGGCGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCa < 2:347648/97‑1 (MQ=255) agaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGAtt > 1:1979973/1‑100 (MQ=255) agaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGAtt > 1:1978878/1‑100 (MQ=255) agaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGAt > 2:1232229/1‑99 (MQ=255) agaCATGGCAACACCTGGTTAAAAAGAATATGAAAACTCATAGCACTATTAATCTACTGGGGGGTAGTAGCAGGG‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATcgggtt > 1:1983225/1‑95 (MQ=255) aTGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCg > 1:1358585/1‑100 (MQ=255) tgtcAACACCTGGGTAAAAAGAATATGAAAAATAATAACTGTATTAAGCTACTGGGGGGTAGTATCAAGG‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGa < 2:2298658/97‑1 (MQ=255) tGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGa > 1:1465833/1‑100 (MQ=255) ggCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGaa > 2:1990265/1‑100 (MQ=255) ggCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGaa > 2:669994/1‑100 (MQ=255) cgaccccTAGTTAACAAGGAGATGAAAGATGATAGCTCCATTAGTGTACTGGGGGGTAGTATCAGTT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAAtt < 2:1333814/95‑1 (MQ=255) cacCTGGTTAACACGAATATGAAAAATCATAACACTATTAATGTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAAt > 1:1950535/1‑100 (MQ=255) acCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATa > 1:1418421/1‑100 (MQ=255) ccTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATAc > 2:526809/1‑100 (MQ=255) tGGGTAACAAGAATATGAAAAAGGATAGAGGTATTGAGAGAGTGGGGGGTAGTATCAAGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAAt < 2:2332329/96‑1 (MQ=255) ggTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTaagatcgg > 2:1108099/1‑94 (MQ=255) aactaaaaTATGAAAAATGATAGCATTGATGATGTATTGGTGGGTATTAACAGGT‑ACT‑G‑‑G‑G‑GGGGAAGTAGAATCAGATTGCCGAATTAATACTAAGAat < 2:22517/94‑1 (MQ=255) aCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAatt > 1:2617986/1‑100 (MQ=255) aCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAatt > 2:28375/1‑100 (MQ=255) aCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAatt > 1:18519/1‑100 (MQ=255) aCAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAatt > 1:102851/1‑100 (MQ=255) cAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑CGTAGAATCAGATTGCCGAATTAATACTAAGAatta > 2:2321073/1‑100 (MQ=255) cAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAatta > 2:904093/1‑100 (MQ=255) aaGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattat > 2:953980/1‑100 (MQ=255) aGAATATGAAAAATTATGGTATTATGAAGATACGGGGTGGTAGTATCAGGT‑AAT‑G‑‑G‑GAGGGA‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattat < 2:2315071/99‑1 (MQ=255) gAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAAttatta > 2:1882794/1‑100 (MQ=255) aaTATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATtattat > 2:575542/1‑100 (MQ=255) gatGAAATATCATAGGTCTATGGATTTACTGGAGAGTATTATCAAGT‑ACT‑GA‑T‑A‑ATGA‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCa < 2:1164616/99‑1 (MQ=255) atGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCAt > 2:993379/1‑100 (MQ=255) taaaaaaTCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATg > 2:1385546/3‑100 (MQ=255) tGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATg > 2:21589/1‑100 (MQ=255) tGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATg > 1:2343633/1‑100 (MQ=255) tGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATg > 2:2658733/1‑100 (MQ=255) gAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGa > 2:1702298/1‑100 (MQ=255) aaaaTCATAGGAGTATAAAGGAACGGGAGGGTAGTATAAAGT‑AAT‑G‑‑G‑G‑GGGGAAGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGa < 2:1323015/98‑1 (MQ=255) aaaTTATAGCACTATTAATTTACTGGGGGGTAGTATCAAAT‑AAT‑G‑‑GAA‑GAGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCa < 2:1562097/94‑1 (MQ=255) aaTCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGa > 2:1503271/1‑100 (MQ=255) cATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAt > 1:1928614/1‑99 (MQ=255) gCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACa > 2:750592/1‑100 (MQ=255) gCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACa > 2:1317860/1‑100 (MQ=255) gCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACa > 1:2107469/1‑100 (MQ=255) cTATTAATCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAct > 1:1665581/1‑100 (MQ=255) taatgtgcgggggggTAGTGTCAGGG‑AGT‑GGTG‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActct < 1:2067278/90‑1 (MQ=255) aaTCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttct > 2:1913672/1‑100 (MQ=255) aaTCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttct > 1:1042151/1‑100 (MQ=255) aaTCTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACtcttct > 2:1914314/1‑100 (MQ=255) cTACTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCa > 2:1059362/1‑100 (MQ=255) cTGGGGGGTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCa > 2:1374980/1‑100 (MQ=255) ggggggTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAg > 2:861084/1‑100 (MQ=255) ggggggTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAg > 2:1112798/1‑100 (MQ=255) atctggTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAg < 2:820161/96‑1 (MQ=255) ggggTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGa > 2:533348/1‑100 (MQ=255) ggTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAgagat > 1:820162/1‑96 (MQ=255) ggTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaaa > 1:136980/1‑100 (MQ=255) ggTAGTATCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaaa > 1:136239/1‑100 (MQ=255) gtagtaTCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAAc > 1:2868534/1‑100 (MQ=255) attaTCAGGT‑AGT‑G‑‑G‑GTAGGA‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACg < 2:494064/97‑1 (MQ=255) taTCAGGTAAGT‑G‑‑A‑G‑GTGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAAc < 2:2516130/96‑1 (MQ=255) aTCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTg > 1:440699/1‑100 (MQ=255) aTCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTg > 1:441001/1‑100 (MQ=255) aTCAGGT‑ACT‑G‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTgg > 2:2580395/1‑100 (MQ=255) tCAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTgg > 1:2308411/1‑100 (MQ=255) cAGGT‑ACTGG‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGt > 2:1154040/1‑100 (MQ=255) t‑ACT‑G‑‑GTG‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTgg < 1:1112802/95‑1 (MQ=255) | TCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGT‑ACT‑G‑‑G‑G‑GGGG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGT > NC_000913/2185769‑2185959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |