BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2204457	108 (0.930)	26 (0.250)	17/176	9.4	21.0%	intergenic (+168/‑139)	yehK/yehL	uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
*	?	NC_000913	= 2204480	100 (0.970)	26 (0.250)	17/176	9.4	21.0%	intergenic (+191/‑116)	yehK/yehL	uncharacterized protein/putative hexameric AAA+ MoxR family ATPase
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 113 total aligned reads displayed.

TTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAA  >  NC_000913/2204358‑2204556

ttATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGCGTTAGGCCTGAAAATAGTAAATaaaa                                                                                                     <  1:1756823/100‑1 (MQ=255)

ttATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGAACAGGCTGTGGTGTTAGGCCTGAACATAGTAAATaaaa                                                                                                     <  2:1785906/100‑1 (MQ=255)

 tATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAg                                                                                                    <  1:222016/100‑1 (MQ=255)

 tATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAg                                                                                                    <  2:21680/100‑1 (MQ=255)

    cTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAAc                                                                                                 <  1:577044/100‑1 (MQ=255)

    cTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAAAAc                                                                                                 >  1:2659759/1‑100 (MQ=255)

     ttAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAAcc                                                                                                <  1:1689631/100‑1 (MQ=255)

       aaTTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTg                                                                                              <  1:1981654/100‑1 (MQ=255)

        aTTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGc                                                                                             >  2:738218/1‑100 (MQ=255)

          tGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCt                                                                                           >  2:1836038/1‑100 (MQ=255)

          tGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGACGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCt                                                                                           >  2:239024/1‑100 (MQ=255)

           gCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTc                                                                                          <  1:1557186/100‑1 (MQ=255)

           gCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTc                                                                                          <  1:905555/100‑1 (MQ=255)

            cAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCa                                                                                         >  1:1468107/1‑100 (MQ=255)

            cAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCa                                                                                         >  1:605396/1‑100 (MQ=255)

            cAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCa                                                                                         >  1:2088365/1‑100 (MQ=255)

             aaCGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCAc                                                                                        >  2:244765/1‑100 (MQ=255)

               cGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACca                                                                                      >  1:795095/1‑100 (MQ=255)

                 gggTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGctggtgaggc                                                                                    >  1:2771002/1‑91 (MQ=255)

                   gTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACcagcag                                                                                  <  1:999579/100‑1 (MQ=255)

                   gTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACcagcag                                                                                  >  1:998920/1‑100 (MQ=255)

                     ccAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGt                                                                                <  1:114519/100‑1 (MQ=255)

                     ccAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGt                                                                                >  1:2659473/1‑100 (MQ=255)

                         ccGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGttttt                                                                            <  1:1510193/100‑1 (MQ=255)

                          cGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGtttttt                                                                           >  2:2039573/1‑100 (MQ=255)

                            tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTttta                                                                         <  1:135652/100‑1 (MQ=255)

                            tGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTttta                                                                         <  1:1035254/100‑1 (MQ=255)

                              gTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttatt                                                                       <  2:2662907/100‑1 (MQ=255)

                               ttATAATTCGTTCGTTGGAACACGATGTTGTACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGATTTtttattt                                                                      >  2:1903165/1‑100 (MQ=255)

                                tataATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTtttattta                                                                     <  1:1404492/100‑1 (MQ=255)

                                  taATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTACATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACt                                                                   >  2:2878442/1‑100 (MQ=255)

                                    aTTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACtgt                                                                 >  2:1067223/1‑100 (MQ=255)

                                       cgttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGa                                                               <  2:963253/99‑1 (MQ=255)

                                       cgttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGAt                                                              >  2:1056395/1‑100 (MQ=255)

                                        gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATc                                                             <  1:2689613/100‑1 (MQ=255)

                                        gttcgttGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATc                                                             <  2:1331289/100‑1 (MQ=255)

                                              tGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGTACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCtct                                                       <  1:1955233/100‑3 (MQ=255)

                                              tGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCttt                                                       >  2:2124037/1‑100 (MQ=255)

                                                 aaCACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCa                                                    <  2:1211179/100‑1 (MQ=255)

                                                  acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                   <  2:2701425/100‑1 (MQ=255)

                                                  acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                   <  2:1280360/100‑1 (MQ=255)

                                                  acacGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAg                                                   >  1:1414699/1‑100 (MQ=255)

                                                    acGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGat                                                 <  1:484253/100‑1 (MQ=255)

                                                    acGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGat                                                 <  2:2774325/100‑1 (MQ=255)

                                                     cGATGTTGCACGGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGata                                                >  1:2492632/1‑100 (MQ=255)

                                                     cGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGata                                                >  2:1337611/1‑100 (MQ=255)

                                                     cGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGata                                                >  1:1834155/1‑100 (MQ=255)

                                                     cGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGata                                                >  2:1020091/1‑100 (MQ=255)

                                                     cGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGat                                                 >  1:425207/1‑99 (MQ=255)

                                                      gATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGatat                                               <  2:2675269/100‑1 (MQ=255)

                                                       aTGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATAtt                                              >  2:1850099/1‑100 (MQ=255)

                                                           tGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTc                                          >  1:2787934/1‑100 (MQ=255)

                                                            gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCg                                         >  1:1842958/1‑100 (MQ=255)

                                                            gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCg                                         >  1:1415427/1‑100 (MQ=255)

                                                            gCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCg                                         <  1:2410943/100‑1 (MQ=255)

                                                             cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                        <  1:1617372/100‑1 (MQ=255)

                                                             cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                        >  2:438063/1‑100 (MQ=255)

                                                             cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                        >  2:2879090/1‑100 (MQ=255)

                                                             cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                        <  1:1134811/100‑1 (MQ=255)

                                                             cacaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGc                                        <  1:2413508/100‑1 (MQ=255)

                                                              acaGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCt                                       >  1:1610282/1‑100 (MQ=255)

                                                                aGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCa                                     <  2:2657593/100‑1 (MQ=255)

                                                                   cTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                  >  2:2735757/1‑100 (MQ=255)

                                                                   cTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                  <  1:387921/100‑1 (MQ=255)

                                                                   cTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaac                                  <  1:2665950/100‑1 (MQ=255)

                                                                      tggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaac                               <  1:1485459/100‑1 (MQ=255)

                                                                      tggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAaacaac                               <  1:2534998/100‑1 (MQ=255)

                                                                       ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACt                              <  1:2556794/100‑1 (MQ=255)

                                                                       ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACt                              <  1:2556710/100‑1 (MQ=255)

                                                                       ggtgTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACt                              <  2:2003417/100‑1 (MQ=255)

                                                                         tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTaa                            >  2:2717616/1‑100 (MQ=255)

                                                                         tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTaa                            >  1:752386/1‑100 (MQ=255)

                                                                         tgtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATATACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTa                             >  2:1850519/1‑99 (MQ=255)

                                                                          gtTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAAt                           >  1:1239358/1‑100 (MQ=255)

                                                                           ttAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATg                          <  2:2831021/100‑1 (MQ=255)

                                                                            tAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                         >  2:1722228/1‑100 (MQ=255)

                                                                            tAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgc                         >  2:639477/1‑100 (MQ=255)

                                                                             aGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcg                        <  1:577723/100‑1 (MQ=255)

                                                                              ggCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                       <  1:2124050/100‑1 (MQ=255)

                                                                              ggCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATgcgc                       >  1:626430/1‑100 (MQ=255)

                                                                               gCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGcc                      <  1:1004370/100‑1 (MQ=255)

                                                                               gCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGcc                      <  1:442545/100‑1 (MQ=255)

                                                                               gCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGcc                      <  1:2393939/100‑1 (MQ=255)

                                                                                  tGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCaaa                   <  1:963381/100‑1 (MQ=255)

                                                                                       aTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAttt              <  1:1020093/100‑1 (MQ=255)

                                                                                       aTAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACAttt              <  1:1337616/100‑1 (MQ=255)

                                                                                        tAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTa             >  2:2616895/1‑100 (MQ=255)

                                                                                        caGTAAATAAAAGATTCTGCTTTACCCTCATTTTTTTTTATTTACTATGATCTGCGTTCCAGATATTTTTAGCTCAAACAACTAATGCGTCAAACATTTa             <  2:2302699/99‑1 (MQ=255)

                                                                                          gTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTAtt           <  1:870393/100‑1 (MQ=255)

                                                                                           taaataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTg          <  1:1841178/100‑1 (MQ=255)

                                                                                           taaataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTCTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTg          <  2:1842945/100‑1 (MQ=255)

                                                                                            aaataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc         >  1:2006027/1‑100 (MQ=255)

                                                                                            aaataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc         >  2:1195870/1‑100 (MQ=255)

                                                                                            aaataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgc         >  1:2470820/1‑100 (MQ=255)

                                                                                             aataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTgcg        <  2:2139825/100‑1 (MQ=255)

                                                                                             aataaaAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATCgc         >  1:845669/1‑99 (MQ=255)

                                                                                                 aaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa    >  1:2660099/1‑100 (MQ=255)

                                                                                                 aaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa    >  1:2607263/1‑100 (MQ=255)

                                                                                                 aaaGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTa    >  1:2508340/1‑100 (MQ=255)

                                                                                                   aGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTaaa  <  1:244766/100‑1 (MQ=255)

TTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCGTTCGTTGGAACACGATGTTGCACAGGCTGTGGTGTTAGGCCTGAAAATAGTAAATAAAAGAACCTGCCTCACCAGCAGGTTTTTTTATTTACTGTGATCTGCTTTCCAGATATTTTTCGCTCAAACAACTAATGCGCCAAACATTTATTGCGCGTAAA  >  NC_000913/2204358‑2204556

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.