| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,971 | 0 | C | A | 36.4% | 342.4 / 228.6 | 195 | intergenic (‑181/+127) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (63/61); new base A (70/1); total (133/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.77e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.60e-01 | |||||||||||
Only 100 of 202 total aligned reads displayed.
AGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCT > NC_000913/3705872‑3706070 | gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcg > 2:2341973/1‑100 (MQ=255) gggAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgc > 1:1000697/1‑99 (MQ=255) gAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATgcggc > 2:2279997/1‑100 (MQ=255) tATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGc > 1:2233660/1‑100 (MQ=255) aTTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGcc > 1:1267032/1‑100 (MQ=255) ttGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCt < 1:2826148/100‑1 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa > 1:2180198/1‑100 (MQ=255) ctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTAt < 2:944258/100‑1 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 1:1812156/1‑100 (MQ=255) ccGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCg > 1:377671/1‑100 (MQ=255) ggATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGc > 1:2116366/1‑100 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATAAGGCGTTAACGCCGCATCCGGca < 2:697841/100‑2 (MQ=37) aTGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCt < 1:2860538/100‑1 (MQ=255) tGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTa > 2:1322059/1‑100 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑a < 1:1420361/100‑1 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg < 1:270829/100‑1 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg < 2:354577/100‑1 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg > 1:2057103/1‑100 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGt > 1:363982/1‑100 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 2:251722/100‑1 (MQ=255) cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCa < 2:522884/100‑1 (MQ=255) agGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAAt < 2:411961/100‑1 (MQ=255) gCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc > 1:2005285/1‑100 (MQ=255) gCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTc > 2:2189122/1‑100 (MQ=255) nacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCa > 1:397039/2‑100 (MQ=255) caGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAAt > 1:1057510/1‑100 (MQ=255) aGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGTCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATa < 2:2704773/100‑1 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAtt < 1:2166533/100‑1 (MQ=255) cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑g > 2:1185729/1‑100 (MQ=255) cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑g < 1:2334974/100‑1 (MQ=255) ataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAt‑tt > 2:2602900/1‑100 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTc < 2:1263636/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑g < 1:2569771/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑g > 1:154900/1‑100 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑Gt > 2:1417621/1‑100 (MQ=255) gcataaaCAAAGCGCACTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAgg > 2:97915/7‑100 (MQ=18) tgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGc < 1:996075/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGcc > 2:2447657/1‑100 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGa > 1:1797744/1‑100 (MQ=255) aCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGAt > 2:764674/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATa < 2:477514/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCgg < 1:1726720/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCgg < 2:654336/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCgg > 2:1836634/1‑100 (MQ=255) cgcTTTGCTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTTC‑‑A‑GAAT‑TCTC‑‑GTAGGCCTGATAAGcag > 2:1713307/1‑96 (MQ=17) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc < 2:2044160/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc < 1:216799/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgc > 1:2349384/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:433220/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:1876506/1‑100 (MQ=255) tttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAgcgc < 2:73948/100‑1 (MQ=255) gttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGC‑‑A‑GGAA‑ACAC‑‑GTAGGCCTGATAAGCGAAgcgc > 1:2581205/10‑100 (MQ=18) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 2:2571594/100‑1 (MQ=255) tttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCAt > 1:1261428/8‑100 (MQ=14) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCAt > 1:1181570/8‑100 (MQ=18) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑AGGGAC‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCAt > 1:2202814/8‑100 (MQ=18) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCAt > 1:1977426/1‑100 (MQ=255) ttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 1:1026383/7‑100 (MQ=18) ttgtaggCCGGATAAGGCGTTCGCGCCGCATCCGGCATAC‑AAAAGTTTGCAAATTCAATAAATTGC‑‑A‑GAAT‑TCAT‑‑GTAGGCCTGATAAGCGAAGCGCAt > 2:2453010/7‑99 (MQ=17) tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAGTTCGTGCAAATTCAATAAATTGC‑‑A‑‑ATA‑TGAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 1:747543/6‑100 (MQ=18) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 2:2337828/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCGTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg < 2:500621/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CCAT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:1591017/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑AGGGAC‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAg > 1:5693/5‑100 (MQ=18) taggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAATTCAATATATTGC‑‑A‑ATCT‑TCTG‑‑GTAGGCCTGATAAGCATCGCGCATCAgg > 2:1926832/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGC‑‑A‑GGAT‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:2018793/4‑100 (MQ=17) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1655796/3‑100 (MQ=18) aggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGC‑‑A‑GAAA‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2728560/3‑100 (MQ=17) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CCAT‑CCTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2434943/3‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑‑‑AAT‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2839048/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGC‑‑A‑GGAG‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1394100/3‑100 (MQ=21) aggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAC‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGc > 2:1243322/3‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAACATATTGC‑‑A‑ATTC‑TCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGct > 1:1626519/2‑99 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2830079/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1685046/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑‑A‑GGAC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2647303/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑‑A‑GGAC‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1065231/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGC‑‑A‑GTTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCa > 1:2689107/2‑100 (MQ=25) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGC‑‑A‑GTTT‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCa > 1:1927959/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGA‑‑T‑CGAT‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1028915/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑A‑ATCT‑CCGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1586249/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑AGGGAC‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCa > 2:2094932/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGC‑‑A‑GGAT‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:600718/2‑100 (MQ=18) ggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACTTTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGAGCATCAGGc > 2:2493784/2‑99 (MQ=17) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:310663/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAATTCAACAAATTGC‑‑‑‑GAATCCCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:2079449/1‑100 (MQ=18) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2189986/1‑99 (MQ=17) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:1347844/1‑99 (MQ=17) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GAGT‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:806694/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGC‑‑A‑GGAA‑ACAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCag > 1:879250/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑A‑GGGA‑CTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCag > 2:2866730/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑A‑GGGA‑CTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGCag > 2:1508364/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAACCGCGCAAATTCAATATATTGCGGA‑GAAA‑AT‑‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGctgt > 2:2659404/1‑97 (MQ=21) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑GAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGGATCAGGCAtt > 2:1894587/1‑100 (MQ=255) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:1874648/1‑100 (MQ=255) ccGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGC‑‑A‑GAAA‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2224785/1‑98 (MQ=17) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:2841885/100‑1 (MQ=255) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:806011/100‑1 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 1:610356/1‑100 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 1:1135449/1‑100 (MQ=255) | AGGGAATGAAGTATTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GAAT‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCT > NC_000913/3705872‑3706070 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |