| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,017 | 0 | C | T | 40.9% | 207.0 / 231.2 | 215 | intergenic (‑227/+81) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base C (55/62); new base T (79/2); total (149/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.72e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.45e-01 | |||||||||||
Only 100 of 216 total aligned reads displayed.
GCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTT > NC_000913/3705920‑3706116 | gcCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACAt < 1:791655/100‑1 (MQ=255) cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑g > 2:1185729/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCg > 1:2166583/1‑100 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCg > 1:154900/1‑100 (MQ=255) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGt > 2:1417621/1‑100 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGcc > 2:2447657/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATa > 1:371195/1‑100 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATa < 2:477514/100‑1 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGcn < 2:397038/100‑2 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCgg < 2:654336/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCgg < 1:1726720/100‑1 (MQ=255) tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCgg > 2:1836634/1‑100 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGa > 2:130223/1‑100 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGa < 1:2240555/100‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAg < 1:1779697/100‑1 (MQ=255) cgcTTTGCTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTTC‑‑A‑GA‑ATTCTCGTAGGCCTGATAAGcag > 2:1713307/1‑96 (MQ=17) gcttttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCACGTAGGCCTGATAAGCGTAgcg > 2:2197671/11‑100 (MQ=17) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAgcg > 1:433220/1‑100 (MQ=255) cttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGC‑‑A‑GG‑AGCTGCGTAGGCCTGATAAGCGTAgcgc > 2:965775/10‑100 (MQ=17) tttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCACGTAGGCCTGATAAGCGTAGCGCAt > 1:1261428/8‑100 (MQ=14) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCAt > 1:1977426/1‑100 (MQ=255) tGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCAt > 2:757035/1‑100 (MQ=255) ttgtaggCCGGATAAGGCGTTCGCGCCGCATCCGGCATAC‑AAAAGTTTGCAAATTCAATAAATTGC‑‑A‑GA‑ATTCATGTAGGCCTGATAAGCGAAGCGCAt > 2:2453010/7‑99 (MQ=17) gTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCACTACATTGC‑‑A‑GC‑ATTTTCGTAGGCCTGATAAGCGGAGCGCagc < 1:1951477/100‑3 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCa > 1:2072212/1‑100 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCa > 1:2695557/1‑100 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 2:2337828/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCGTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 2:500621/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAATTCAATACATTGC‑‑ATGG‑GCCAT‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:1245512/5‑100 (MQ=17) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑AGGG‑ACTAT‑GTAGGCCTGATAAGCATAGCGCATCAg > 1:5693/5‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCGTAC‑GAAATCGTGCTAATTCAATATATTGT‑‑G‑GG‑CTCCACGTAGGCCTGATAAGCGTAGCGCATCAgg > 1:301902/4‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGC‑‑A‑GT‑TTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGc > 1:2344368/3‑100 (MQ=25) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CC‑ATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:2434943/3‑100 (MQ=21) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑A‑GG‑GACTATGTAGGCCTGATAAGCATAGCGCATCAGGc > 2:1784239/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGC‑‑A‑GG‑AGTTATGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2127215/3‑100 (MQ=21) aggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGc > 2:2019591/3‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAACATATTGC‑‑A‑AT‑TCTCTTGTAGGCCTGATAAGCGTAGCGCATCAGGct > 1:1626519/2‑99 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:315588/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:2830079/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑‑A‑GG‑ACCAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:2578198/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGC‑‑A‑TG‑AGCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1055559/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGA‑‑T‑CG‑ATCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1028915/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAACTCAATATATTGC‑‑A‑GAGATCAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1217599/2‑100 (MQ=17) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑AGGG‑ACTAT‑GTAGGCCTGATAAGCATAGCGCATCAGGCa > 2:2094932/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGC‑‑A‑GG‑AGTTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 1:2828885/2‑100 (MQ=21) ggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACTTTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGAGCATCAGGc > 2:2493784/2‑99 (MQ=17) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2189986/1‑99 (MQ=17) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:1347844/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CC‑ATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 1:1572285/1‑99 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGC‑‑A‑GG‑AAACACGTAGGCCTGATAAGCGAAGCGCATCAGGCag > 1:879250/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑A‑GG‑GACTATGTAGGCCTGATAAGCATAGCGCATCAGGCag > 2:1508364/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAACCGCGCAAATTCAATATATTGCGGA‑GA‑AAAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGctgt > 2:2659404/1‑97 (MQ=21) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGC‑‑A‑GT‑TTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaat > 1:345152/9‑98 (MQ=25) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGC‑‑A‑GT‑TTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaat > 1:2310095/9‑98 (MQ=25) ccGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAtt > 1:1874648/1‑100 (MQ=255) ccGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGC‑‑A‑GA‑AACCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2224785/1‑98 (MQ=17) caggataaggcgTTCACGCCGCATCCTGCCTAC‑AAAAGCACGCAAATTCAATATATTGC‑‑A‑GA‑GATGGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:819304/9‑100 (MQ=14) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CC‑ATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaatt > 2:720531/8‑97 (MQ=21) cgatctaggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGC‑‑AGGA‑ACGAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaact < 1:2597716/93‑4 (MQ=25) cgatctaggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGC‑‑AGGA‑ACGAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaact < 1:1146744/93‑4 (MQ=21) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:2457023/7‑100 (MQ=17) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGC‑‑A‑GA‑GTTCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:2747323/7‑100 (MQ=17) ggataaggcgTTCACGCCTTATCCGGCCTAC‑AAAATTGTGTAAATTCAATAAATTGA‑‑T‑CG‑ATCCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:2629190/7‑100 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGC‑‑A‑TG‑AGCCACGTAGGCCTGATAATCGTAGCTCATCAAGCAgttt > 1:1106356/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGC‑‑A‑GG‑GACTATGTAGGCCTGATAAGCATAGCGCATCAGGCagctt > 1:1891837/7‑96 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAATTCAATAGATTGC‑‑A‑GA‑GATTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAattt > 2:2358888/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGC‑‑A‑GG‑AGTTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat > 2:2271105/7‑98 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGC‑‑A‑GG‑AGTCATGTACGCCTGATACGCGTAGCGCATCAGGCAtttat > 2:1952617/7‑98 (MQ=21) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAATTCAATATATTGC‑‑A‑CC‑ATCCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaattct > 1:1641059/6‑95 (MQ=21) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 2:2841885/100‑1 (MQ=255) tGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgc > 1:610356/1‑100 (MQ=255) aaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGC‑‑A‑GT‑TTATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCaatcttacg < 1:1327297/98‑9 (MQ=37) aggcgTTCACGCCGCATCCGACCCAC‑AAAGTCTTGCAAAATCAATAAATTGC‑‑AGGA‑ACGAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaactagatcg > 2:2597697/2‑91 (MQ=25) ggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGC‑‑A‑GG‑ACCAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAGTtttgcgtt < 2:2578180/100‑1 (MQ=18) gcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgccttt > 1:825324/1‑100 (MQ=255) gcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAGTtttgccttt > 1:2682708/1‑100 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg > 1:2159031/1‑100 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 2:1876493/100‑1 (MQ=255) gTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgc < 2:1221602/100‑1 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 2:371194/100‑1 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc > 1:134289/1‑100 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 2:123995/100‑1 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 2:1460154/100‑1 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 2:1596941/100‑1 (MQ=255) aaCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCa < 1:1407571/99‑1 (MQ=255) aCGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATc < 1:704248/100‑1 (MQ=255) cTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc < 2:1127792/100‑1 (MQ=255) cTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc < 2:769853/100‑1 (MQ=255) tATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc > 2:586896/1‑98 (MQ=255) tCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGt > 2:1636189/1‑100 (MQ=255) cGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTAt < 2:2057089/100‑1 (MQ=255) gCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATgg < 2:1708506/100‑1 (MQ=255) cGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattat > 2:1085040/1‑100 (MQ=255) aaaTTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt < 1:1843325/100‑1 (MQ=255) aaTTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATa < 1:97915/100‑1 (MQ=255) tCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 2:271996/100‑1 (MQ=255) tCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATagag < 2:825323/100‑1 (MQ=255) cAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga > 1:1271790/1‑100 (MQ=255) cAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 2:2669874/100‑1 (MQ=255) cAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAgaga < 1:1010727/100‑1 (MQ=255) | GCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGC‑‑A‑GA‑ATTTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTT > NC_000913/3705920‑3706116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |