| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,177,171 | 0 | T | A | 23.8% | 217.2 / 70.8 | 109 | intergenic (+43/‑187) | tufB/secE | translation elongation factor EF‑Tu 2/preprotein translocase membrane subunit |
| Reads supporting (aligned to +/- strand): ref base T (46/37); new base A (11/15); total (57/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
CCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAA > NC_000913/4177074‑4177270 | ccGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTATCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAttt > 2:1551884/1‑100 (MQ=255) cGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTg > 2:853768/1‑100 (MQ=255) tGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGAt < 2:900320/100‑1 (MQ=255) gAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATg < 1:238808/100‑1 (MQ=255) gAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATg < 1:2171364/100‑1 (MQ=255) ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGccc > 2:2713916/1‑100 (MQ=255) ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGccc > 2:600776/1‑100 (MQ=255) ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGccc > 1:2109474/1‑100 (MQ=255) ggcggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGc > 2:823125/1‑98 (MQ=255) cggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCtt > 2:1837283/1‑100 (MQ=255) cggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCtt > 2:210178/1‑100 (MQ=255) cggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtt < 1:1349465/100‑1 (MQ=255) ggcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCttt > 2:1499826/1‑100 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTATTTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt < 1:2536788/100‑1 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGGCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt < 2:2560085/100‑1 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCtttt < 1:1511658/100‑1 (MQ=255) gcCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttt < 1:391210/100‑1 (MQ=255) ccGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttta < 2:697381/100‑2 (MQ=255) ccGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCtttta < 1:1532059/100‑2 (MQ=255) cGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTg < 2:246443/100‑1 (MQ=255) tACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCa > 1:1240306/1‑100 (MQ=255) aCCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagtgc < 1:588223/100‑6 (MQ=38) ccGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagtgcg < 2:1188936/100‑7 (MQ=38) gTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCAAATGATGCCCttttagtgcgca < 2:1274215/100‑9 (MQ=37) ggCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTc > 1:818660/1‑100 (MQ=255) ggCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTc > 1:2819959/1‑100 (MQ=255) ggCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCATTTTTGCACGC‑TTTc > 1:2852935/1‑100 (MQ=255) gcgcGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCg < 2:444531/100‑1 (MQ=255) gcgcGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCg < 1:955082/100‑1 (MQ=255) cgcgGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGt > 2:680726/1‑100 (MQ=255) cGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGa > 2:440142/1‑100 (MQ=255) tGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAAcc < 2:367482/100‑1 (MQ=255) tGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAAcc < 1:2504253/100‑1 (MQ=255) tGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAAcc > 1:401193/1‑100 (MQ=255) aGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACATgg > 1:2077835/1‑100 (MQ=255) gCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGc < 2:602399/100‑1 (MQ=255) cAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCt < 2:2664668/100‑1 (MQ=255) cAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCt > 2:148514/1‑100 (MQ=255) cAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCt > 1:1218802/1‑100 (MQ=255) cAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCt > 1:899582/1‑100 (MQ=255) aaaaGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCtc > 1:636664/1‑100 (MQ=255) ttCTGATCTAATTGCCGATAACATTTGACTCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAg < 2:119285/100‑1 (MQ=255) tCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGt < 1:457570/100‑1 (MQ=255) gAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGAt > 1:2765149/1‑100 (MQ=255) aaTTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCt > 1:473948/1‑100 (MQ=255) aTTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCtt < 1:2576843/100‑1 (MQ=255) aTTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCtt < 1:1700775/100‑1 (MQ=255) aTTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCtt > 1:2303340/1‑100 (MQ=255) ttGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCttt < 1:1390627/100‑1 (MQ=255) ttGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCttt < 2:2097411/100‑1 (MQ=255) tGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTg > 2:2053903/1‑100 (MQ=255) ccGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTc < 1:1935849/100‑1 (MQ=255) cGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCa < 1:2078156/100‑1 (MQ=255) cGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCa > 2:1450994/1‑100 (MQ=255) gATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCAt < 1:825342/100‑1 (MQ=255) aTAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATa > 1:1122723/1‑100 (MQ=255) aaCATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAAt < 1:1837296/100‑1 (MQ=255) cATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCa < 2:2766055/100‑1 (MQ=255) aTTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAt > 1:1404059/1‑100 (MQ=255) aTTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAt > 1:2657823/1‑100 (MQ=255) tttGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAAGCTGGCTCATCAGTGATTTTCTTTGTCATAATc > 2:2660352/1‑97 (MQ=255) tttGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCCTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCAtt > 1:1170776/1‑100 (MQ=255) ttGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTg < 1:609326/100‑1 (MQ=255) tGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGc < 2:1240302/100‑1 (MQ=255) tGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGc < 1:1012743/100‑1 (MQ=255) tGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGc < 1:2517694/100‑1 (MQ=255) tGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGc < 2:186345/100‑1 (MQ=255) aTGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACa > 2:1593/1‑100 (MQ=255) tGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAg > 2:395175/1‑100 (MQ=255) cgcACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGc < 2:1729297/100‑1 (MQ=255) tgcaaaaaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctc > 1:1438700/5‑100 (MQ=255) cACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctc > 1:2335808/1‑100 (MQ=255) cACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGctc < 1:2536721/100‑1 (MQ=255) caaaaaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTg > 1:737397/3‑100 (MQ=255) tAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGt < 1:723459/100‑1 (MQ=255) aaaaaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGt > 2:1892458/2‑100 (MQ=255) ttccgatcttcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt < 2:2134109/91‑1 (MQ=255) aaaaGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt > 2:1980066/1‑100 (MQ=255) aaaaGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt > 2:586220/1‑100 (MQ=255) aaaaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt > 1:2663150/1‑100 (MQ=255) aaaGGGCATCAAATGATGCCCTTTTAGTGCGCATTGCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGtt > 2:2781003/1‑100 (MQ=21) aaGGGCATCAAATGATGCCCTTTTTTTTTTT‑TTTTTTACCAGAACCTGGCCCATCAGTGATTTTCTTTGTCATAATTATTTCTGAGACAGGCCTTGtt > 2:825760/1‑98 (MQ=255) aaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa > 2:504214/1‑100 (MQ=255) aaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa > 1:2239880/1‑100 (MQ=255) aaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa > 2:2821774/1‑100 (MQ=255) aaGGGCATCAAATGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGa > 2:2237454/1‑100 (MQ=255) ccgatctcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAg < 1:721174/94‑1 (MQ=255) ggCATCATTTGATGCCCTTTTTTTTTTT‑TTTTTTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAggg > 2:2228945/1‑100 (MQ=255) ggCATCATTTGATGCCCTTTTTTTTTTT‑TTTCTTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAggg > 2:2209841/1‑100 (MQ=255) ggCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGCGACAGCCTCTGTCGAtgg > 2:1176517/1‑100 (MQ=255) gCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGc > 1:2372064/1‑100 (MQ=255) catcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCg > 1:1971135/1‑100 (MQ=255) atcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGt > 2:2514577/1‑100 (MQ=255) atcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATCGCTGAGACAGGCTCTGTTGAGGGCGt < 1:2713937/100‑1 (MQ=255) tcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGttagatcggaa > 1:2134122/1‑91 (MQ=255) tcatTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGta < 2:1469163/100‑1 (MQ=255) catTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAgagatcgg > 2:721172/1‑93 (MQ=255) catTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtat < 2:2303326/100‑1 (MQ=255) atTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGtata > 2:2672697/1‑100 (MQ=255) atTTGATGCCCTTTTTGCACGC‑TTTCGTACAAGAACCTTGCTCATCAGTGATTTTCTTTGTCATAATTATTGCCGAGATAGGCTATGTTGAGGGCGtata > 2:846024/1‑100 (MQ=255) | CCGTGAAGGCGGCCGTACCGTTGGCGCGGGCGTTGTAGCAAAAGTTCTGAGCTAATTGCCGATAACATTTGACGCAATGCGCACTAAAAGGGCATCATTTGATGCCCTTTTTGCACGC‑TTTCGTACCAGAACCTGGCTCATCAGTGATTTTCTTTGTCATAATCATTGCTGAGACAGGCTCTGTTGAGGGCGTATAA > NC_000913/4177074‑4177270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |