| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,645,196 | G→A | intergenic (‑14/‑189) | prlC ← / → rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,645,196 | 0 | G | A | 99.2% | 439.5 / ‑4.6 | 128 | intergenic (‑14/‑189) | prlC/rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base A (68/59); total (68/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
GCCTTAGTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTC > NC_000913/3645097‑3645292 | cTTAGTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGAtt < 1:555339/100‑1 (MQ=255) ttAGTCACGGCTGGAACGACATGTTCCTGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGAtt < 1:1509732/99‑1 (MQ=255) tAGTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTaa < 1:2715642/100‑1 (MQ=255) tAGTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTaa > 2:2451378/1‑100 (MQ=255) tAGTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTa > 1:375307/1‑99 (MQ=255) aGTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTaaa > 1:41311/1‑100 (MQ=255) aGTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTaaa > 1:500991/1‑100 (MQ=255) gTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAag > 2:958017/1‑100 (MQ=255) gTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAag < 1:2465050/100‑1 (MQ=255) gTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAag < 1:2090897/100‑1 (MQ=255) tCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAaga < 2:553134/100‑1 (MQ=255) tCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAaga < 2:884646/100‑1 (MQ=255) cACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAagag > 1:756897/1‑100 (MQ=255) cACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAagag > 2:911939/1‑100 (MQ=255) cACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAagag < 2:2284942/100‑1 (MQ=255) cACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAagag > 2:110346/1‑100 (MQ=255) cACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAagag > 2:1380802/1‑100 (MQ=255) gCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTa < 2:2141190/100‑1 (MQ=255) ggAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAgg > 2:432881/1‑100 (MQ=255) gAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCACTTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGa < 2:658003/100‑1 (MQ=255) gAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAg > 2:2573766/1‑98 (MQ=255) aaCGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGaa > 2:2741584/1‑100 (MQ=255) aCGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAg < 2:2174892/100‑1 (MQ=255) aCGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAg < 2:1248904/100‑1 (MQ=255) aCATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAgcgn < 2:2453971/100‑2 (MQ=255) cATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCt > 1:573873/1‑100 (MQ=255) tcttCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCa < 2:1755623/98‑1 (MQ=255) tGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCa > 2:195044/1‑100 (MQ=255) tGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCa > 2:1466543/1‑100 (MQ=255) tGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCa < 2:411769/100‑1 (MQ=255) tCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACa > 1:1172456/1‑100 (MQ=255) ccGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAg < 2:41311/100‑1 (MQ=255) gggAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGgc > 2:1895983/1‑100 (MQ=255) gggAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGgc < 2:2355018/100‑1 (MQ=255) gagaATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGgcgc > 2:2488233/1‑100 (MQ=255) aTTTTAGTAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCCTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTa < 1:1041002/100‑1 (MQ=255) aTTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTa > 1:2851140/1‑100 (MQ=255) aTTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTa < 1:1266199/100‑1 (MQ=255) aTTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTa > 1:1400546/1‑100 (MQ=255) aTTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTa > 1:950397/1‑100 (MQ=255) aTTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTa < 1:2522653/100‑1 (MQ=255) ttttAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTAc > 2:409957/1‑100 (MQ=255) tttAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACa < 1:138019/100‑1 (MQ=255) tAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATa > 2:1608452/1‑100 (MQ=255) gAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAAt > 2:1498655/1‑100 (MQ=255) aaaaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAAtg < 2:2294305/100‑1 (MQ=255) aaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAAtgtg < 2:2098743/100‑1 (MQ=255) aaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAAtgtg > 2:1618549/1‑100 (MQ=255) aaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAAtgtg < 1:2409680/100‑1 (MQ=255) ggAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATgtgtgt < 1:2488249/100‑1 (MQ=255) gAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTa < 1:1033824/100‑1 (MQ=255) aGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAg < 1:756662/100‑1 (MQ=255) aGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAg > 1:34047/1‑100 (MQ=255) ggCAATTCAAAGGGAGTCAGTAACGTATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGc < 2:2804033/100‑1 (MQ=255) gCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCa > 2:1339871/1‑100 (MQ=255) tCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATgggg < 2:210425/100‑1 (MQ=255) tCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATgggg < 1:2694254/100‑1 (MQ=255) cAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCTACAGGCGCTTTACATAATGTGTGTAGCATgggg < 2:1883875/99‑1 (MQ=255) cAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATgggg > 2:1148596/1‑99 (MQ=255) cAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATgggg > 2:292060/1‑99 (MQ=255) cAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGt > 1:2688047/1‑100 (MQ=255) cAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGt > 1:2688180/1‑100 (MQ=255) cAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGt > 1:1090371/1‑100 (MQ=255) cAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCACTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGt > 2:1575333/1‑100 (MQ=255) cttccgatctgTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTa < 1:806642/90‑1 (MQ=255) gggAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAg < 1:2647846/100‑1 (MQ=255) aGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAgtgt < 2:1466643/100‑1 (MQ=255) gTCAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTa > 2:1624791/1‑100 (MQ=255) gTCAGTAACGGATTCGGCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCAGGGGGTTAAGTGTa > 2:581326/1‑100 (MQ=255) gatctaCGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGt < 1:1484694/95‑1 (MQ=255) cAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAg > 1:748100/1‑99 (MQ=255) cAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGt < 2:332039/100‑1 (MQ=255) cAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGt > 2:286061/1‑100 (MQ=255) cAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGt < 2:2613899/100‑1 (MQ=255) cAGTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATAGGGTTAAGTGTAGt > 2:1040433/1‑100 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAgatcggaag > 2:806641/1‑92 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGa > 2:1916967/1‑100 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGa > 2:972524/1‑100 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGa > 2:1856800/1‑100 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGa > 2:138050/1‑100 (MQ=255) tAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGaa < 2:1003140/100‑1 (MQ=255) tAACGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGaa < 1:2062350/100‑1 (MQ=255) aaCGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAAt < 1:1466550/100‑1 (MQ=255) aCGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAAtt < 2:1483484/100‑1 (MQ=255) aCGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAAtt < 2:1543276/100‑1 (MQ=255) cGGATTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAAttt > 2:2708341/1‑100 (MQ=255) aTTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCaa < 1:972526/100‑1 (MQ=255) aTTCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCaa < 1:909924/100‑1 (MQ=255) ttCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAAt < 2:852102/100‑1 (MQ=255) tCGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATg < 1:846913/100‑1 (MQ=255) cGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATga > 1:2317241/1‑100 (MQ=255) cGTCATTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATga > 1:133327/1‑100 (MQ=255) aTTCGCGCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGaaa < 2:2280771/100‑1 (MQ=255) cgcgCAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGt > 2:1842333/1‑100 (MQ=255) gcgcAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGtt > 2:2569383/1‑100 (MQ=255) gcgcAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGtt > 2:1968222/1‑100 (MQ=255) gcgcAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGtt > 1:2026518/1‑100 (MQ=255) gcgcAGTCCTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGtt > 2:2514656/1‑100 (MQ=255) ccTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCttt < 1:990883/100‑1 (MQ=255) cTGATTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTc > 1:2362691/1‑100 (MQ=255) | GCCTTAGTCACGGCTGGAACGACATGTTCCGGGAGAATTTTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTC > NC_000913/3645097‑3645292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |