| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,467,129 | C→T | E40K (GAA→AAA) | treR ← | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,467,129 | 0 | C | T | 99.2% | 418.4 / ‑4.9 | 122 | E40K (GAA→AAA) | treR | trehalose 6‑phosphate‑inducible trehalose regulon transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (60/61); total (60/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
GACGGGTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTCAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGATATCTT > NC_000913/4467033‑4467224 | gACGGGTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAac < 1:821297/100‑1 (MQ=255)gACGGGTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAac < 1:547073/100‑1 (MQ=255) aCGGGTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAaca < 1:156077/100‑1 (MQ=255) cGGGTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAacac > 2:220330/1‑100 (MQ=255) cGGGTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAacac < 1:1648138/100‑1 (MQ=255) ggTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGc > 2:615311/1‑100 (MQ=255) ggTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGc > 2:952151/1‑100 (MQ=255) gTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCt > 2:2104828/1‑100 (MQ=255) gatctatgGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTcgcg < 2:913095/95‑1 (MQ=255) cAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTcgcg < 1:2341812/100‑1 (MQ=255) cAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTcgc > 2:859574/1‑99 (MQ=255) aaTGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCGATGCTGATTCATCACTGCTTTAACACGCTCGCgg < 2:956700/100‑1 (MQ=255) aaTGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCgg < 2:1694219/100‑1 (MQ=255) aaTGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCgg < 2:1960690/100‑1 (MQ=255) atgatgGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAACATCCATGCTGATTCATCACTGCTTTAACACGCTCGCgg‑g > 2:2639194/1‑100 (MQ=255) tgatgGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑Gt > 1:1343168/1‑100 (MQ=255) tgatgGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑Gt > 2:1239836/1‑100 (MQ=255) atgGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTcgcgagatc > 1:913097/1‑95 (MQ=255) gACCAC‑TTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGc < 2:1884009/100‑1 (MQ=255) aCCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGc < 1:1689975/100‑1 (MQ=255) aCCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGc < 1:42320/100‑1 (MQ=255) ccACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCt < 1:1507292/100‑1 (MQ=255) ccACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCt < 1:1232248/100‑1 (MQ=255) ccACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCt < 2:515407/100‑1 (MQ=255) cACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTc < 1:848590/100‑1 (MQ=255) cTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCAc > 2:2713408/1‑100 (MQ=255) cTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCAc > 1:999590/1‑100 (MQ=255) ttATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCAcgc < 1:742043/100‑1 (MQ=255) ttATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCAcgc < 2:1152253/100‑1 (MQ=255) tATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCAcgcc > 2:2768347/1‑100 (MQ=255) tATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCAcgcc < 1:1493157/100‑1 (MQ=255) gCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCtt > 2:1141557/1‑100 (MQ=255) gCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCtt > 1:1504914/1‑100 (MQ=255) gCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCtt > 1:792708/1‑100 (MQ=255) tttGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTc < 1:1899429/100‑1 (MQ=255) ttGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGGCGTGAGCCAGCTCAcccgcgagcg < 2:959148/100‑10 (MQ=37) ttGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGGCGTGAGCCAGCTCAcccgcgagcg < 1:1272463/100‑10 (MQ=37) ttGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCg < 1:344470/100‑1 (MQ=255) ttGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGAAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCg < 1:20820/100‑1 (MQ=255) tGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGt < 2:2455653/100‑1 (MQ=255) tGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGt < 2:1527060/100‑1 (MQ=255) tGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGt > 2:37546/1‑100 (MQ=255) tGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGt > 2:2681823/1‑100 (MQ=255) gCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGtt > 2:2724365/1‑100 (MQ=255) gCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGtt > 2:582896/1‑100 (MQ=255) cccACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTa > 2:2575089/1‑100 (MQ=255) ccACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTAt < 2:2870082/100‑1 (MQ=255) cACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTAtt > 1:27511/1‑100 (MQ=255) cACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTAtt > 2:2835907/1‑100 (MQ=255) tctcATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTc < 2:1437794/97‑1 (MQ=255) cGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCa < 2:2469958/100‑1 (MQ=255) cATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAga > 1:1437800/1‑99 (MQ=255) cATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGc < 1:1995602/100‑1 (MQ=255) aGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTAGCTCACGCCGCTTTCGTTATTCAGCAcc > 1:2515845/1‑100 (MQ=255) gcgcgcgcAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCAccc > 1:2379865/1‑100 (MQ=255) cgcgcAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCggg > 2:653503/1‑100 (MQ=255) cgcgcAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCggg < 2:362973/100‑1 (MQ=255) gcgcAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTTACGCCGCTTTCGTTATTCAGCACCCGGGa < 2:2364205/100‑1 (MQ=255) cAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAAc > 1:676277/1‑100 (MQ=255) agagCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACt > 2:390117/1‑100 (MQ=255) gagCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTg < 2:262098/100‑1 (MQ=255) gagCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTg > 2:1912630/1‑100 (MQ=255) gagCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTg > 1:532224/1‑100 (MQ=255) agCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGt < 1:615313/100‑1 (MQ=255) gCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTa > 2:1426097/1‑100 (MQ=255) gCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTa > 1:1476363/1‑100 (MQ=255) gCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTa > 1:292476/1‑100 (MQ=255) gggAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGa > 1:719827/1‑100 (MQ=255) gggAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGa < 2:2331717/100‑1 (MQ=255) ggAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCGGGGAAACTGTAGAt > 2:1967811/1‑100 (MQ=255) ggAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGAt > 2:744396/1‑100 (MQ=255) ggAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGAt < 2:2679219/100‑1 (MQ=255) gAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGAtt < 2:2744676/100‑1 (MQ=255) gAAGGGGAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGAtt < 1:1996373/100‑1 (MQ=255) ggggAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTcc > 2:2848487/1‑100 (MQ=255) ggggAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTcc < 1:2768368/100‑1 (MQ=255) gggAAAATCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTccc < 2:2236704/100‑1 (MQ=255) gggAAAATCCATGCTGATTCATCACGGCTTCAACACGCTCTCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTcc < 2:2646121/99‑1 (MQ=255) gAAAATCCATGCTGGTTCCTCGCTGATTTAACACGCTTGCGG‑GTGGGCTGGCTCACACCGCTTTCTTTCTTCAGCACCCGGGGAACTGTAGATTTcccc < 2:1244669/99‑1 (MQ=255) aaTCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTTGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCAcgc > 2:333648/1‑100 (MQ=255) aaTCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCAcgc > 2:867032/1‑100 (MQ=255) aTCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCAcgc‑c < 1:942215/100‑1 (MQ=255) tCCATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCAcgc‑cg > 2:811003/1‑100 (MQ=255) cATGCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCt < 1:2614123/100‑1 (MQ=255) gCTGATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTaa > 1:2069351/1‑100 (MQ=255) gATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAgcg > 2:2754231/1‑100 (MQ=255) gATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAgcg < 1:2575107/100‑1 (MQ=255) gATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAgcg < 2:1972594/100‑1 (MQ=255) gATTCATCACTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAgcg > 2:2384076/1‑100 (MQ=255) tcaCTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGat > 1:2616678/1‑100 (MQ=255) tcaCTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGat > 1:1712486/1‑100 (MQ=255) tcaCTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGat > 2:2123185/1‑100 (MQ=255) caCTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGCGCGCTTAAgcggcgtgg < 1:1098018/100‑7 (MQ=255) caCTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGata > 2:1247080/1‑100 (MQ=255) caCTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGata > 2:1498202/1‑100 (MQ=255) cTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTGGATTTCCCCACGC‑CGCTTCAGCGCGCGATATc > 1:1115825/1‑100 (MQ=255) cTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGATATc < 1:2500339/100‑1 (MQ=255) cTGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGATATc > 2:1291735/1‑100 (MQ=255) tGCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGATATCt > 1:783662/1‑100 (MQ=255) gCTTTAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAAATGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGATATCtt > 2:736219/1‑100 (MQ=255) | GACGGGTAACAATGATGGCGACCACTTTATCGCTTTGCCCACGCATAGCGCGCGCAGAGCGGGAAGGGGAAAATCCATGCTGATTCATCACTGCTTCAACACGCTCGCGG‑GTGAGCTGGCTCACGCCGCTTTCGTTATTCAGCACCCGGGAAACTGTAGATTTCCCCACGC‑CGCTTAAGCGCGCGATATCTT > NC_000913/4467033‑4467224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |