| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 560,553 | C→T | A286V (GCC→GTC) | sfmD → | putative outer membrane export usher protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 560,553 | 0 | C | T | 96.6% | 388.1 / 0.8 | 118 | A286V (GCC→GTC) | sfmD | putative outer membrane export usher protein |
| Reads supporting (aligned to +/- strand): ref base C (3/1); new base T (61/53); total (64/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
GGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCTT > NC_000913/560456‑560648 | ggCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGtcc < 2:1378859/100‑1 (MQ=255) gCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGtccc > 1:2586591/1‑100 (MQ=255) gCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGtccc < 1:2161744/100‑1 (MQ=255) cAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCa > 2:2273075/1‑100 (MQ=255) cAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCa > 1:386757/1‑100 (MQ=255) cAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCa < 1:2329666/100‑1 (MQ=255) aaTACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCaa > 1:914784/1‑100 (MQ=255) aaTACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCaa < 1:36196/100‑1 (MQ=255) aTACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAAc < 2:1139929/100‑1 (MQ=255) aTACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAAc < 1:2078038/100‑1 (MQ=255) aCAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACgg > 1:2378432/1‑100 (MQ=255) cAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGt > 2:404440/1‑100 (MQ=255) aGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTa < 2:53344/100‑1 (MQ=255) aaGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCTTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGt > 1:1576756/1‑100 (MQ=255) gTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTgg < 2:1619065/100‑1 (MQ=255) tGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTggg > 2:2798922/1‑100 (MQ=255) gATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGa > 2:1981669/1‑100 (MQ=255) gATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGa > 1:440841/1‑100 (MQ=255) atTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTg > 2:2835067/1‑100 (MQ=255) ttttCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGc < 2:2814531/100‑1 (MQ=255) tttCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGcc < 2:1531245/100‑1 (MQ=255) tttCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGcc < 1:2363232/100‑1 (MQ=255) tttCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGcc < 2:90378/100‑1 (MQ=255) ttCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGcc < 1:2387635/99‑1 (MQ=255) cGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGt > 2:2546044/1‑100 (MQ=255) gATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCACAACGGTACGTGGGATTGCCCGTa > 1:1255134/1‑100 (MQ=255) gCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTAcggc < 2:2503232/100‑1 (MQ=255) gCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTAcggc > 1:1088547/1‑100 (MQ=255) cGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTAcggcg < 2:2020217/100‑1 (MQ=255) cGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTAcggcg < 1:2688713/100‑1 (MQ=255) ttGGATTTCTTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACggcggc < 2:2470231/100‑1 (MQ=255) ttGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACggcggc < 1:1699810/100‑1 (MQ=255) gATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCa < 2:2296227/100‑1 (MQ=255) aTTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAg > 1:536540/1‑100 (MQ=255) tttCGTGGTGTACGGCTTTATTCTTCTGTTAATATGTATCCTGATAGCGATCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCa > 2:554819/1‑98 (MQ=255) tttCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTGCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGc < 2:1551232/100‑1 (MQ=255) tttCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGc < 2:2058088/100‑1 (MQ=255) tCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTa < 2:1658787/100‑1 (MQ=255) tCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTa > 1:1313473/1‑100 (MQ=255) gtggtgTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAAc > 1:1681764/1‑100 (MQ=255) gtggtgTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAAc < 1:2205134/100‑1 (MQ=255) gtggtgTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAAc < 1:24506/100‑1 (MQ=255) gtggtgTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAAc < 1:24561/100‑1 (MQ=255) gtACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTc > 2:2482539/1‑100 (MQ=255) cGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGc > 2:2808897/1‑100 (MQ=255) ggCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCa > 1:2273321/1‑100 (MQ=255) gCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCaa > 1:1469525/1‑100 (MQ=255) gCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCaa > 1:1114047/1‑100 (MQ=255) cTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCCGCTAACGATTCGGCaaa > 2:1166134/1‑100 (MQ=255) cttctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGttt < 2:94105/100‑1 (MQ=255) cttctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGttt > 1:416559/1‑100 (MQ=255) cttctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGttt < 1:1809310/100‑1 (MQ=255) cttctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGttt < 1:369154/100‑1 (MQ=255) cttctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGtt > 1:1555014/1‑99 (MQ=255) ttctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGtttt > 1:2654820/1‑100 (MQ=255) ctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttat > 2:2678194/1‑100 (MQ=255) ctGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttat < 2:914782/100‑1 (MQ=255) tGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttatt < 1:1400535/100‑1 (MQ=255) tGATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttatt > 1:188036/1‑100 (MQ=255) gATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttatta > 1:812179/1‑100 (MQ=255) gATAATATGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttatta > 1:1821048/1‑100 (MQ=255) ataataTGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttatta < 2:636818/99‑1 (MQ=255) ataataTGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTtattat > 1:2010438/1‑100 (MQ=255) taataTGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATtatc < 2:79365/100‑1 (MQ=255) taataTGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATtatc < 1:1600944/100‑1 (MQ=255) atGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATtatctatc < 1:2798943/100‑1 (MQ=255) tGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCa > 1:11651/1‑100 (MQ=255) tGTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCa > 1:1198312/1‑100 (MQ=255) gTATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCaa < 1:385065/100‑1 (MQ=255) tATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTttattaagatcggaa > 2:2111815/1‑91 (MQ=255) tATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCaaa < 1:1981683/100‑1 (MQ=255) tATCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCaaa > 2:731797/1‑100 (MQ=255) aTCCTGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAg > 2:2335185/1‑100 (MQ=255) aTCCTGATAGCCAGCAAGGATTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAg > 2:58752/1‑100 (MQ=255) tCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGc > 1:2010730/1‑100 (MQ=255) tGATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTAt > 1:121304/1‑100 (MQ=255) gATAGCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATg < 1:2188513/100‑1 (MQ=255) gCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTc > 1:467533/1‑100 (MQ=255) gCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTc < 2:1302062/100‑1 (MQ=255) gCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTc < 1:2622610/100‑1 (MQ=255) gCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTc > 2:444078/1‑100 (MQ=255) gCCAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTc > 1:2086070/1‑100 (MQ=255) ccAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTcc < 2:440840/100‑1 (MQ=255) ccAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTcc > 2:570275/1‑100 (MQ=255) ccAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATNATCTATCAAAGCTATGTTTcc > 2:1661386/1‑100 (MQ=255) cAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTccc > 1:1477570/1‑100 (MQ=255) cAGCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTccc < 2:714071/100‑1 (MQ=255) gCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTccccc > 2:2265760/1‑100 (MQ=255) gCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTccccc > 1:1556678/1‑100 (MQ=255) gCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTccccc < 1:1718447/100‑1 (MQ=255) gCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTccccc > 1:1860133/1‑100 (MQ=255) gCAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAACGGTTTTATTATCTATCAAAGCTATGTTTccccc < 2:1903472/100‑1 (MQ=255) cAAGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCg > 1:1576240/1‑100 (MQ=255) aaGGGTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCgg < 2:188035/100‑1 (MQ=255) aGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGgc > 1:809113/1‑100 (MQ=255) gggTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCTCCCGgc > 2:1624180/1‑99 (MQ=255) gggTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGgcg > 1:202057/1‑100 (MQ=255) ggTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGgcgc > 1:554371/1‑100 (MQ=255) gTTTGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCt < 1:1865431/100‑1 (MQ=255) tttGTCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCtt > 2:177766/1‑100 (MQ=255) | GGCAATACAGGAAGTGATATTTTCGATGGCGTTGGATTTCGTGGTGTACGGCTTTATTCTTCTGATAATATGTATCCTGATAGCCAGCAAGGGTTTGCCCCAACGGTACGTGGGATTGCCCGTACGGCGGCCCAGCTAACGATTCGGCAAAATGGTTTTATTATCTATCAAAGCTATGTTTCCCCCGGCGCTT > NC_000913/560456‑560648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |