| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,168,850 | T→C | intergenic (‑18/‑223) | ycfQ ← / → bhsA | repressor for bhsA(ycfR)/biofilm, cell surface and signaling protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,168,850 | 0 | T | C | 98.1% | 371.0 / ‑4.8 | 108 | intergenic (‑18/‑223) | ycfQ/bhsA | repressor for bhsA(ycfR)/biofilm, cell surface and signaling protein |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (69/36); total (70/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.24e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 108 total aligned reads displayed.
TATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGTGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTAA > NC_000913/1168754‑1168944 | tATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGAc > 1:2158250/1‑100 (MQ=255)tATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGAc > 1:2889309/1‑100 (MQ=255) aaGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACtgtg < 1:199881/100‑1 (MQ=255) aGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGtga > 2:1888262/1‑100 (MQ=255) aGCGCGGCATCCCTGTCGAACACTTTGGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACtgtg < 1:15693/99‑1 (MQ=255) gcgcGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGtgaa > 1:483740/1‑100 (MQ=255) cgcgGCATCCTTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGtgaat < 1:523952/100‑1 (MQ=255) gcgGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGtgaatg > 1:2729706/1‑100 (MQ=255) gcgGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGtgaatg < 2:2331338/100‑1 (MQ=255) gCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGaaa > 2:1602908/1‑100 (MQ=255) cATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAg < 1:2468941/100‑1 (MQ=255) cgcTGTCGAACACATTTGGGCGGCCACGGCTATTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGtt > 1:1949666/3‑100 (MQ=255) cccTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGtt > 1:1367147/1‑100 (MQ=255) cccTGTCGAACACTTTTGGGCGGCCACGGCGTTTTTTTACACATTGTGTGTAGTCAGTGGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGtt > 1:1580592/1‑100 (MQ=255) ccTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGtta > 1:578351/1‑100 (MQ=255) cTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGttat < 1:292854/100‑1 (MQ=255) tGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTATCTGGCGACTGTGCATGAAAGGgtatt > 1:1725269/1‑100 (MQ=255) gTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGttatta < 1:2460106/100‑1 (MQ=255) cGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGTGACTGTGAATGAAAGGTTATtata < 2:1746595/100‑1 (MQ=255) gAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATaa > 1:1991388/1‑100 (MQ=255) aaCACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATaaa < 2:446347/100‑1 (MQ=255) acacTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATaaaa < 1:970941/100‑1 (MQ=255) cacTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATaaaaa > 1:1043250/1‑100 (MQ=255) cTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAaata > 1:1912057/1‑100 (MQ=255) cTTTTGGGCGGCCACGGC‑TTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAaataa > 1:2464420/1‑100 (MQ=255) ttGGGAGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGACATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTAAAAAAAAAATAATc < 2:192429/100‑1 (MQ=255) tGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCa < 2:2763229/100‑1 (MQ=255) tGGGCGGCCACGGCTATTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCa < 1:2849164/100‑1 (MQ=255) cgatctgcCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCa < 2:74102/94‑1 (MQ=255) ggcggcCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTTGAGACTGTGAATGAAACGTTATTATACAaataattct > 2:2825903/1‑96 (MQ=255) gcCACGGCTTTTTTTTATACATTGTTTTTATTCAGTTGCCATGATTCCGTTTTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTcc > 2:2848877/1‑99 (MQ=255) gcCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCaagatcg > 1:74102/1‑94 (MQ=255) aCGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCAGTTGTACCTGGCGACTGTGAATGAAAAAAAAAAAAAAAAATAATCAcc < 2:1656501/93‑1 (MQ=255) cGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCa > 1:1130773/1‑100 (MQ=255) ggCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCAc < 2:2153673/100‑1 (MQ=255) ggCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCAc > 1:841250/1‑100 (MQ=255) gCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCAcc < 2:1498982/100‑1 (MQ=255) gCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCAcc < 2:2729685/100‑1 (MQ=255) tttttttACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGNTATNATAAAAATAATCACCTCCGTTCACCAGt > 1:479/1‑100 (MQ=255) ttttGCACATGGTGTTGAGTCAGTTGCCATGAGGCCTGTGGACCTGGCTACTGTGAATGAAAGGTTATTATAAAAATAATCGCCTCCGTTCACCAGTCCa < 2:1031754/100‑1 (MQ=255) tttACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAg > 2:1869472/1‑100 (MQ=255) tttACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAg > 1:1845547/1‑100 (MQ=255) tttACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAg > 1:329063/1‑100 (MQ=255) tACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGAt > 2:253083/1‑100 (MQ=255) cacaTTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATcc > 1:2138669/1‑100 (MQ=255) cacaTTGTGTGGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATcc < 1:270615/100‑1 (MQ=255) acaTTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATccc < 2:1292767/100‑1 (MQ=255) acaTTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATccc < 1:1465142/100‑1 (MQ=255) acaTTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATccc > 1:2573877/1‑100 (MQ=255) caTTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCa > 1:2525625/1‑100 (MQ=255) aTTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCa < 2:1993511/99‑1 (MQ=255) aTTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCAt > 1:1326062/1‑100 (MQ=255) aTTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCAt > 2:411856/1‑100 (MQ=255) ttGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATa > 1:122649/1‑100 (MQ=255) gtgtTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATaaa < 1:411857/100‑1 (MQ=255) gtgtTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATaaa > 1:2383604/1‑100 (MQ=255) tgtTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATaaaa > 1:678155/1‑100 (MQ=255) tgtTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATaaaa > 1:146668/1‑100 (MQ=255) tgtTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATaaaa > 1:236075/1‑100 (MQ=255) gtTGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATaaaaa > 1:2646594/1‑100 (MQ=255) ttGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAaat > 1:1704492/1‑100 (MQ=255) ttGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAaat < 2:2174999/100‑1 (MQ=255) tGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAaata > 2:2116956/1‑100 (MQ=255) tGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAaata > 1:2175012/1‑100 (MQ=255) tGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAaata > 2:2199184/1‑100 (MQ=255) tGAGTCAGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAaata > 1:2270011/1‑100 (MQ=255) aGTTGCCATGATGGCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCt > 1:1958038/1‑100 (MQ=255) aGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCt > 1:1836696/1‑100 (MQ=255) aGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCt > 1:2279579/1‑100 (MQ=255) aGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCt > 2:1466066/1‑100 (MQ=255) aGTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCt < 1:1801519/100‑1 (MQ=255) gTTGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCtt > 1:1596346/1‑100 (MQ=255) tGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTc > 1:1769169/1‑100 (MQ=255) tGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTc < 2:42438/100‑1 (MQ=255) tGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTc < 2:578349/100‑1 (MQ=255) tGCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTc > 2:2336418/1‑100 (MQ=255) tGCCATGATGCCGTTGTACCTGGCGACTGTAAAAGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAAAAATTGCTTTc > 2:1896913/1‑100 (MQ=255) nccATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCt > 2:2568959/2‑100 (MQ=255) gCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCt > 1:1070396/1‑100 (MQ=255) gCCATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCt > 2:126525/1‑100 (MQ=255) ccgatcttgCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCt < 2:1056511/93‑1 (MQ=255) ccATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTa > 2:2310484/1‑100 (MQ=255) cATGATGCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTAt < 1:2438600/100‑1 (MQ=255) cATGATGCCGTTGTACCTGGCGACTGTGAATCACAGGTTATTATAAAAATAATAACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTac < 2:1580583/100‑2 (MQ=255) atgatgCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTAtt > 2:1998136/1‑100 (MQ=255) ttcctttGTACCTGGTGACCTTCAATGAATGGTTCTTATAACAGTAATCACCTCCGTTCATCAGTCCAGATCCCATAATAATAATTTCTTTCTAttga < 2:719998/93‑3 (MQ=255) tgCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTagatcgg > 1:1056513/1‑94 (MQ=255) tgCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAAc > 2:628464/1‑100 (MQ=255) gCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACt < 2:1479312/100‑1 (MQ=255) gCCGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACt > 1:106119/1‑100 (MQ=255) cGTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGa > 2:1109941/1‑100 (MQ=255) gTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACGAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGaa > 2:2023162/1‑100 (MQ=255) gTTGTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCAAAAAAAAAAAAAAATAATTGCTTTCTATTTAACt < 2:1324663/97‑1 (MQ=255) gTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAAtt > 2:2148238/1‑100 (MQ=255) gTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAAtt > 2:1240571/1‑100 (MQ=255) gTACCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAAtt > 2:1240559/1‑100 (MQ=255) aCCTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTa > 2:1170918/1‑100 (MQ=255) ccTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTaa > 1:1775752/1‑100 (MQ=255) ccTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTaa > 2:1542559/1‑100 (MQ=255) ccTGGCGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTaa < 2:483738/100‑1 (MQ=255) | TATCAAGCGCGGCATCCCTGTCGAACACTTTTGGGCGGCCACGGCTTTTTTTTACACATTGTGTTGAGTCAGTTGCCATGATGCCGTTGTACCTGGTGACTGTGAATGAAAGGTTATTATAAAAATAATCACCTCCGTTCACCAGTCCAGATCCCATAAAAATAATTGCTTTCTATTTAACTGAAATTTAA > NC_000913/1168754‑1168944 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |