| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,866,592:1 | +C | 100% | coding (960/993 nt) | rpoS ← | RNA polymerase, sigma S (sigma 38) factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,866,588 | 1 | . | C | 98.0% | 368.7 / 0.1 | 102 | coding (964/993 nt) | rpoS | RNA polymerase, sigma S (sigma 38) factor |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base C (52/48); total (53/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 | cATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑g < 2:1711956/100‑1 (MQ=255) cGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccc > 2:1027416/1‑100 (MQ=255) ccTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccc‑cctg > 1:947002/1‑97 (MQ=255) ccTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccc‑cctg < 1:1783009/100‑4 (MQ=255) ttttATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑ccc‑cctgcg > 1:1822470/1‑95 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTg > 1:419345/1‑100 (MQ=255) aTTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTg < 1:2251076/100‑1 (MQ=255) ttGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGc < 1:1135172/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCa < 2:1143092/100‑1 (MQ=255) tgtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCa > 2:1444328/1‑100 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAg < 2:946997/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAg < 1:1529951/100‑1 (MQ=255) gtgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAg < 1:2044993/100‑1 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAgg > 2:1539489/1‑100 (MQ=255) tgCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAgg > 1:300091/1‑100 (MQ=255) nacaGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAt > 1:2070564/2‑100 (MQ=255) cacaGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAt > 1:889537/1‑100 (MQ=255) acaGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAtt > 1:510358/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAttt > 2:48961/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAttt > 2:1625018/1‑100 (MQ=255) caGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGAttt < 1:1861167/100‑1 (MQ=255) caGAAAACACCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCCTACTTACTCGCGGAACAGCGCTTCGATCTTCACC‑CCC‑CTGCGTCTCAAGGAtt > 2:1401325/1‑99 (MQ=255) aGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTc > 2:1677781/1‑100 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTcg < 1:905573/100‑1 (MQ=255) gAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTcg > 2:556336/1‑100 (MQ=255) aaaaGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTcgc < 2:1422561/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTcgcg < 2:1117526/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTcgcg < 2:907793/100‑1 (MQ=255) aaaGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTcgcg < 2:845989/100‑1 (MQ=255) aaGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCgcgc < 1:1250886/100‑1 (MQ=255) ggCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCaa > 2:1858668/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAAc > 1:74603/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAAc > 1:674382/1‑100 (MQ=255) ccAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAAc < 1:1318661/100‑1 (MQ=255) cAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTCCTCGCGGAACAGCGCTTCGACATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACg > 1:22207/1‑100 (MQ=255) cTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGgcgc < 1:917071/100‑1 (MQ=255) cGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAg < 2:1723460/100‑1 (MQ=255) cgaggcTGGCCTTTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGcc < 1:484173/95‑1 (MQ=255) gagaCTGGCC‑TTTCGTACAGATGCTTACTTCCTAGTTGAACTGCGCTTCGATGTCCA‑G‑CCCTCTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCtt < 2:1515870/100‑1 (MQ=255) agaCTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 1:441204/1‑100 (MQ=255) agaCTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc > 1:347969/1‑100 (MQ=255) agaCTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTc < 2:286187/100‑1 (MQ=255) gaCTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCa > 1:1860309/1‑100 (MQ=255) cTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc < 1:1528896/100‑1 (MQ=255) cTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAAc > 2:723588/1‑100 (MQ=255) ggCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 2:2319991/1‑100 (MQ=255) ggCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:1424657/1‑100 (MQ=255) ggCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCt > 1:989944/1‑100 (MQ=255) gCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTg < 1:1481749/100‑1 (MQ=255) c‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGaa < 1:1539499/100‑1 (MQ=255) ttCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATc < 2:2188048/100‑1 (MQ=255) tCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCt > 1:2051652/1‑100 (MQ=255) cTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTg < 1:1042791/100‑1 (MQ=255) gACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGc < 1:984520/100‑1 (MQ=255) aCAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCg > 1:995826/1‑100 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGa > 1:1258826/1‑100 (MQ=255) cAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGACGCAGGCCTTCAACCTGAATCTGGCGa > 2:157033/1‑100 (MQ=255) gATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAac < 1:603202/100‑1 (MQ=255) acttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCa > 1:1812025/1‑100 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 1:1843135/1‑100 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 2:792970/1‑100 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 2:1469356/1‑100 (MQ=255) cttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCAc > 2:2320462/1‑100 (MQ=255) ttactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg < 2:2102471/100‑1 (MQ=255) tgcctCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACg < 1:1827236/97‑1 (MQ=255) tactCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACgg < 1:1880912/100‑1 (MQ=255) actCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 2:233808/100‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg < 1:1439707/99‑1 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:24320/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGt > 2:2095614/1‑100 (MQ=255) ctCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATCTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACggg > 2:1112392/1‑99 (MQ=255) tCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg < 2:951730/100‑1 (MQ=255) tCGCGGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTg > 1:969061/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGGACACGTTCACGGGTGa > 2:252383/1‑100 (MQ=255) cgcgGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGa > 2:1447872/1‑100 (MQ=255) cgGAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAgg < 1:1760775/100‑1 (MQ=255) gAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGcc < 2:2066628/100‑1 (MQ=255) gAACAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGCGAGGcc > 1:1981401/1‑100 (MQ=255) cAGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAt < 2:953662/100‑1 (MQ=255) aGCGCTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAAtt > 1:610037/1‑100 (MQ=255) cgcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc > 1:558476/1‑100 (MQ=255) cgcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTc > 2:1380886/1‑100 (MQ=255) gcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa > 2:1692441/1‑100 (MQ=255) gcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:1219733/100‑1 (MQ=255) gcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:889533/100‑1 (MQ=255) gcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 1:876496/100‑1 (MQ=255) gcTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTCAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCa < 2:1258821/100‑1 (MQ=255) cTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 1:1930839/100‑1 (MQ=255) cTTCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCAc < 2:116154/100‑1 (MQ=255) tCGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGa > 2:1604875/1‑100 (MQ=255) cGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc > 2:1894203/1‑100 (MQ=255) cGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 1:1497218/100‑1 (MQ=255) cGATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAc < 2:347967/100‑1 (MQ=255) gATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc < 2:419342/100‑1 (MQ=255) gATATTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGAcc > 1:562844/1‑100 (MQ=255) atatTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAGACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCt > 1:564258/1‑100 (MQ=255) tatTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa < 1:1444336/100‑1 (MQ=255) tatTCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTa > 2:35103/1‑100 (MQ=255) ttCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 1:1318320/1‑100 (MQ=255) ttCA‑GCCCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACa > 2:194553/1‑100 (MQ=255) | CATCGGACCTTTTATTGTGCACAGAAAAGGCCAGCCTCGCTTGAGACTGGCC‑TTTCTGACAGATGCTTACTTACTCGCGGAACAGCGCTTCGATATTCA‑G‑CCC‑CTGCGTTTGCAGGATTTCGCGCAAACGGCGCAGGCCTTCAACCTGAATCTGGCGAACACGTTCACGGGTGAGGCCAATTTCACGACCTACA > NC_000913/2866489‑2866682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |