| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3423822 | 0 (0.000) | 16 (0.200) | 5/166 | NT | 100% | intergenic (‑35/+58) | rrfD/rrlD | 5S ribosomal RNA of rrnD operon/23S ribosomal RNA of rrnD operon |
| ? | NC_000913 | 4040506 = | NA (NA) | intergenic (+83/‑11) | rrlA/rrfA | 23S ribosomal RNA of rrnA operon/5S ribosomal RNA of rrnA operon | |||||
ACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACG > NC_000913/3423723‑3423921 | aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT < 2:138445‑M1/100‑1 (MQ=255)aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT < 1:906174‑M1/100‑1 (MQ=255)aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT < 1:2265285‑M1/100‑1 (MQ=255)aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT > 1:210014‑M1/1‑100 (MQ=255)aCGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGAT > 1:2074517‑M1/1‑100 (MQ=255) cGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGAACGCAGAAGCGGTCTGATaaaa < 1:750939‑M1/100‑5 (MQ=255) ttCTGTTTCATCAGACCGCTTCTGCGTTCTGATgaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtg > 1:425458‑M1/1‑33 (MQ=255) tCTGTTTTATCAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtga > 2:2354724‑M1/1‑32 (MQ=255) cTGTTTTATCAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaa > 2:2139736‑M1/1‑31 (MQ=255) cTGTTTCATCAGACCGCTTCTGCGTTCTGATgaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaa > 1:2123498‑M1/1‑31 (MQ=255) gTTTTATCAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaac > 1:1021555‑M1/1‑29 (MQ=255) gTTTTATCAGACCGCTTCTGCGTCCTGATaaaacagaatttgcctggcggcagtagcgcggtagtcccacctgaccccatcccgacctcagaagggaaa > 2:720680‑M1/1‑29 (MQ=255) tttATCAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgc > 2:1871627‑M1/1‑27 (MQ=255) tttATCAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgc > 2:515088‑M1/1‑27 (MQ=255) tttATCAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgc > 1:578548‑M1/1‑27 (MQ=255) ttATCAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgcc > 2:2305202‑M1/1‑26 (MQ=255) tcatcAGACCGCTTCTGTGTTCTGATgaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgcc > 1:1557118‑M1/3‑26 (MQ=255) tcatcAGACCGCTTCTGCGTTCTGATgaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgcc > 1:511600‑M1/3‑26 (MQ=255) tATCAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccg > 1:1889341‑M1/1‑25 (MQ=255) cAGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtag > 2:2184174‑M1/1‑22 (MQ=255) aGACCGCTTCTGCGTTCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagc > 1:680035‑M1/1‑21 (MQ=255) cTTCTGCGTTCTGATgaaacagaatttgcctggcggccgtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgat > 1:2066605‑M1/1‑15 (MQ=255) tCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtg > 1:1024373‑M1/1‑6 (MQ=255) tCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtg > 1:2160866‑M1/1‑6 (MQ=255) tCTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtg > 2:499930‑M1/1‑6 (MQ=255) cTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgg < 1:1354042‑M1/100‑96 (MQ=255) cTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgg < 1:958001‑M1/100‑96 (MQ=255) cTGATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgg < 1:1962757‑M1/100‑96 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg < 2:2275341‑M1/100‑98 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg > 2:2201905‑M1/1‑3 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg < 1:1394504‑M1/100‑98 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg < 1:1496343‑M1/100‑98 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg < 2:165997‑M1/100‑98 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg < 2:1512852‑M1/100‑98 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg > 1:963636‑M1/1‑3 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg < 1:1841810‑M1/100‑98 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg < 1:1978850‑M1/100‑98 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg > 1:2047117‑M1/1‑3 (MQ=255) gATaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatgggagtgtgggg > 2:1403443‑M1/1‑3 (MQ=255) aTaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgacccgatgccgaactcagaagtgaaacgccgtagcgccggtggtagggtggg > 1:797309‑M1/1‑2 (MQ=255) aTaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggt > 1:2075114‑M1/1‑2 (MQ=255) aTaaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtgggg < 2:668249‑M1/99‑98 (MQ=255) taaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtc > 2:1487764‑M1/1‑1 (MQ=255) taaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtc > 2:2134383‑M1/1‑1 (MQ=255) taaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtc > 2:1157069‑M1/1‑1 (MQ=255) taaaacagaatttgcctggcggcagtagcgcggtggtcccacctgaccccatgccgaactcagaagtgaaacgccgtagcgccgatggtagtgtggggtc > 1:1669031‑M1/1‑1 (MQ=255) | ACGGCGTTTCACTTCTGAGTTCGGCATGGGGTCAGGTGGGACCACCGCGCTACGGCCGCCAGGCAAATTCTGTTTTATCAGACCGCTTCTGCGTTCTGATTTAATCTGTATCAGGCTGAAAATCTTCTCTCATCCGCCAAAACAGCTTCGGCGTTGTAAGGTTAAGCCTCACGGTTCATTAGTACCGGTTAGCTCAACG > NC_000913/3423723‑3423921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |