New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 394598523 (0.260)8 (0.100) 4/164 NT 27.4% noncoding (2282/2904 nt) rrlC 23S ribosomal RNA of rrnC operon
?NC_000913 = 4039776 NA (NA)noncoding (2258/2905 nt) rrlA 23S ribosomal RNA of rrnA operon

Only 100 of 102 total aligned reads displayed.

AATGTTTGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCA  >  NC_000913/3945886‑3946084
                                                                                                   |                                                                                                   
aaTGTTTGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAG                                                                                                     <  2:1517408‑M1/100‑1 (MQ=255)
   gTTTGATGTTCTAAGGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCAc                                                                                                  <  2:2296970/100‑1 (MQ=25)
   gTTTGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCAc                                                                                                  >  1:2216312/1‑100 (MQ=38)
   gTTTGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCAc                                                                                                  >  1:1226323/1‑100 (MQ=38)
   gTTTGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCAc                                                                                                  >  1:1226331/1‑100 (MQ=38)
    tttGATGTTCTAACGTGGACCCGTGATCCGTGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCa                                                                                                   <  2:1356020/98‑1 (MQ=25)
    tttGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCAc                                                                                                  <  2:2139977/99‑1 (MQ=38)
     ttGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGa                                                                                                >  2:339946/1‑100 (MQ=38)
        aTGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAgg                                                                                             <  2:124139/100‑1 (MQ=38)
         tGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGt                                                                                            <  1:277034/100‑1 (MQ=38)
          gTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGtt                                                                                           <  2:1518638/100‑1 (MQ=38)
           ttCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTg                                                                                          >  2:524262/1‑100 (MQ=38)
            tCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAgg                                                                                             <  2:34684/96‑1 (MQ=35)
            tCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTgg                                                                                         <  1:1958914/100‑1 (MQ=38)
             cTAACGTTGACCCGTAATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGatcggaagagcgt                                                                                        >  2:58949‑M1/1‑87 (MQ=255)
             cTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTggn                                                                                        <  2:675126/100‑2 (MQ=38)
             cTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGc                                                                                        <  2:1291339/100‑1 (MQ=38)
              tAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGCCTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCt                                                                                       >  2:224422/1‑100 (MQ=25)
               aaCGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTa                                                                                      >  2:466121/1‑100 (MQ=38)
                    ggACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCt                                                                                 >  1:2296834/1‑100 (MQ=35)
                     gACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTg                                                                                >  2:1794025/1‑100 (MQ=33)
                      aCCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTgg                                                                               <  2:1915410/100‑1 (MQ=33)
                       cccGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTgg                                                                               >  2:1682205/1‑99 (MQ=33)
                        ccGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTc                                                                             <  2:1916053/100‑1 (MQ=33)
                         cGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCg                                                                            <  2:959347/100‑1 (MQ=33)
                         cGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCg                                                                            <  1:1701022/100‑1 (MQ=32)
                         cGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCg                                                                            >  1:13521/1‑100 (MQ=32)
                          gTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCgg                                                                           <  1:1796349/100‑1 (MQ=32)
                           tGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGa                                                                          <  1:1069931/100‑1 (MQ=31)
                            gATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGAc                                                                         >  1:2220916/1‑100 (MQ=11)
                            gATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGAc                                                                         <  2:2071498/100‑1 (MQ=11)
                            gATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGAc                                                                         >  1:1711707/1‑100 (MQ=11)
                                                              tGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGaccgccccagtcaaactacccaccagacactgtccgcaacccggatcacgggtccacgttag                                       >  1:578220‑M1/1‑38 (MQ=255)
                                                                      gCGGTCTCCTCCTAAAGAGTCACGGAGGAGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaa                               >  1:1093529‑M1/1‑30 (MQ=255)
                                                                      gCGGTCTCCTCCTAAAGAGTAACGGAGGAGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaa                               >  1:764149‑M1/1‑30 (MQ=255)
                                                                        ggTCTCCTCCTAAAGAGTAACGGAGGAGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaac                             >  1:997480‑M1/1‑28 (MQ=255)
                                                                        ggTCTCCTCCTAAAGAGTAACGGAGGAGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaac                             >  1:290053‑M1/1‑28 (MQ=255)
                                                                         gTCTCCTCCTAAAGAGTAACGGAGGAGtccgctccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaaaatcaaac                             >  2:125592‑M1/1‑27 (MQ=255)
                                                                         gTCTCCTCCTAAAGAGTAACGGAGGAGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaaca                            >  1:751961‑M1/1‑27 (MQ=255)
                                                                            tcctccTAAAGAGTAACGGAGGAGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacatta                         >  2:1836078‑M1/1‑24 (MQ=255)
                                                                                             ggaggaGaccgccccggtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        <  1:2321189‑M1/100‑94 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacctcaaacattaaaggatggtctttca          >  1:2245576‑M1/1‑7 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        <  1:1625324‑M1/100‑94 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        >  1:1014310‑M1/1‑7 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        >  2:1062536‑M1/1‑7 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        >  1:1147399‑M1/1‑7 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        >  2:759803‑M1/1‑7 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        >  1:1439943‑M1/1‑7 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        >  2:2286640‑M1/1‑7 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        >  2:2330960‑M1/1‑7 (MQ=255)
                                                                                             ggaggaGaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaag        >  1:199946‑M1/1‑7 (MQ=255)
                                                                                              gaggagaccgccccagtcacactacccaccagacacggtccgcgacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:1463970‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:1317635‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       >  1:1639786‑M1/1‑6 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  2:1900380‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       >  1:2210960‑M1/1‑6 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:1431446‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:1506584‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:203787‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:919703‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  2:571891‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:384122‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:107724‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:177919‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccacaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:1481815‑M1/100‑95 (MQ=255)
                                                                                              gaggagaccgccccagtcaaactacccaccagacactgtccacaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  1:1482249‑M1/100‑95 (MQ=255)
                                                                                               aggagaccgccccagtcaaactacccactagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaagg       <  2:1419864‑M1/99‑95 (MQ=255)
                                                                                               aggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggt      <  1:2056100‑M1/100‑96 (MQ=255)
                                                                                               aggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggt      >  1:485229‑M1/1‑5 (MQ=255)
                                                                                               aggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggt      <  2:1180676‑M1/100‑96 (MQ=255)
                                                                                                ggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtc     <  1:1782109‑M1/100‑97 (MQ=255)
                                                                                                ggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtc     <  2:610897‑M1/100‑97 (MQ=255)
                                                                                                ggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtc     <  2:2303995‑M1/100‑97 (MQ=255)
                                                                                                ggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtc     <  2:1979225‑M1/100‑97 (MQ=255)
                                                                                                ggagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtc     >  2:1218843‑M1/1‑4 (MQ=255)
                                                                                                 gagaccgccccagtcaaactaccctccagacactgtccgcaacccggattacgggtcaacgtgagaacatcaaacattagagggtggtatttcaaggtcg    <  2:2224849‑M1/100‑98 (MQ=255)
                                                                                                 gagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtattttaaggtcg    <  1:1232413‑M1/100‑98 (MQ=255)
                                                                                                 gagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcg    <  1:313557‑M1/100‑98 (MQ=255)
                                                                                                 gagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcg    <  2:1270918‑M1/100‑98 (MQ=255)
                                                                                                 gagaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcg    <  1:1473518‑M1/100‑98 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcgg   >  1:1679781‑M1/1‑2 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcgg   >  1:1564563‑M1/1‑2 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcgg   >  2:58872‑M1/1‑2 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcgg   >  1:994497‑M1/1‑2 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcgg   <  1:837713‑M1/100‑99 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcgg   >  1:1275926‑M1/1‑2 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcgg   <  1:1639408‑M1/100‑99 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcg    >  2:284503‑M1/1‑2 (MQ=255)
                                                                                                  agaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcg    >  1:967717‑M1/1‑2 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattccgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  >  1:491812‑M1/1‑1 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  <  2:1225069‑M1/100‑100 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  >  1:759085‑M1/1‑1 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  >  1:1854899‑M1/1‑1 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  >  1:1302644‑M1/1‑1 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  <  1:344383‑M1/100‑100 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  >  1:1410596‑M1/1‑1 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  <  1:1638379‑M1/100‑100 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  >  1:2102996‑M1/1‑1 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggattacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  >  2:1944222‑M1/1‑1 (MQ=255)
                                                                                                   gaccgccccagtcaaactacccaccagacactgtccgcaacccggagtacgggtcaacgttagaacatcaaacattaaagggtggtatttcaaggtcggc  >  2:1303570‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
AATGTTTGATGTTCTAACGTGGACCCGTGATCCGGGTTGCGGACAGTGTCTGGTGGGTAGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATCCTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAGCGTGACGGCGCGAGCAGGTGCGAAAGCA  >  NC_000913/3945886‑3946084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.