New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4415962 =NA (NA)7 (0.090) 6/166 NT NA noncoding (5/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4415992 = NA (NA)intergenic (+92/+25) aidB/yjfN DNA alkylation damage repair protein; flavin‑containing DNA binding protein, weak isovaleryl CoA dehydrogenase/DUF1471 family periplasmic protein

Only 100 of 131 total aligned reads displayed.

ATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTG  >  NC_000913/4415863‑4416061
                                                                                                   |                                                                                                   
ggtaccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatg                                                                                                     <  1:931573‑M1/1‑1 (MQ=255)
 gtaccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGc                                                                                                    <  1:879444‑M1/2‑1 (MQ=255)
   accgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCg                                                                                                  >  1:893659‑M1/97‑100 (MQ=255)
    ccgcattattaccatgtacgaagaccagcagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCgg                                                                                                 <  1:1492747‑M1/5‑1 (MQ=255)
      tgctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGAc                                                                                               <  2:2178525/100‑1 (MQ=255)
       gctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACa                                                                                              >  1:476351/1‑100 (MQ=255)
       gctgcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACa                                                                                              >  2:2004421/1‑100 (MQ=255)
        cgtcaggCGACGGGGAAGTGTGTGGGTAAGCGTATACGACTGATGGGACGCGGGTTTCGATTAGCTAAATGAACTATGTGTAAATTGTAGGCCGGACa                                                                                              <  2:1915783/93‑1 (MQ=255)
          gcGGGCGACGGGGGGGGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTATCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                           <  2:1253049/100‑1 (MQ=255)
          gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                           >  1:825519/1‑100 (MQ=255)
          gcGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAgg                                                                                           <  1:1718131/100‑1 (MQ=255)
              gCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCt                                                                                       >  2:649856/1‑100 (MQ=255)
               cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                      >  2:879440/1‑100 (MQ=255)
               cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                      >  1:1611636/1‑100 (MQ=255)
               cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                      <  1:650195/100‑1 (MQ=255)
               cGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTc                                                                                      <  2:1683617/100‑1 (MQ=255)
                 aCGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTcgc                                                                                    <  2:576400/100‑1 (MQ=255)
                    gggggAGTGTGTGTGTAAGCGTATAGGAATGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgcc                                                                                 <  2:903623/100‑1 (MQ=255)
                     ggggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGcgccg                                                                                <  2:204288/100‑1 (MQ=255)
                       ggAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCa                                                                              <  1:1058093/100‑1 (MQ=255)
                          gtgtgtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCC                                                                           >  1:190738‑M2/1‑100 (MQ=255)
                              gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa                                                                       >  1:860869/1‑100 (MQ=255)
                              agcagcacgataactggcgcgtacaggcgatactgtctgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCTGCa                                                                       >  1:344535‑M1/70‑100 (MQ=255)
                                gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                     >  1:1569340/1‑100 (MQ=255)
                                cagcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                     >  1:1431883‑M1/68‑100 (MQ=255)
                                 tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    >  1:538259/1‑100 (MQ=255)
                                 tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    >  1:776915/1‑100 (MQ=255)
                                 agcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    >  1:2332883‑M1/67‑100 (MQ=255)
                                 agcctgataactggcgcgtacaggcgataccgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                    >  1:1876894‑M1/67‑100 (MQ=255)
                                  gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                   >  2:1061932/1‑100 (MQ=255)
                                  gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                   >  2:1468424/1‑100 (MQ=255)
                                   tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                  >  1:103988/1‑100 (MQ=255)
                                     aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                >  2:2232575/1‑100 (MQ=255)
                                     aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                >  1:212222/1‑100 (MQ=255)
                                      gataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                 >  1:1276264‑M1/62‑98 (MQ=255)
                                       ataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAtt                                                              >  1:2012354‑M1/61‑100 (MQ=255)
                                        gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                             <  2:982307/100‑1 (MQ=255)
                                          ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                           <  1:1908951/100‑1 (MQ=255)
                                           taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                          >  2:189856/1‑100 (MQ=255)
                                           taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                          <  1:1834762/100‑1 (MQ=255)
                                              gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                       >  1:925583/1‑100 (MQ=255)
                                               aCTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg                                                      <  2:787458/100‑1 (MQ=255)
                                                cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                     >  2:1666156/1‑100 (MQ=255)
                                                cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                     >  2:342082/1‑100 (MQ=255)
                                                 tGATGCGACGCTTGTTTAGATTAACTAATTGAAATATGTGAAAATTGTAGGCCGGACAAGAAGCTCGCGCCGCATCCGGCATTGTTAATTTGCTGTAGa                                                     >  2:1839355/1‑99 (MQ=38)
                                                 tGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGAt                                                    <  1:404978/100‑1 (MQ=255)
                                                  gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                   <  2:2188540/100‑1 (MQ=255)
                                                    tGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGac                                                 >  1:894786/1‑100 (MQ=255)
                                                     gCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGaca                                                >  2:297671/1‑100 (MQ=255)
                                                       gACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACt                                              >  1:820596/1‑100 (MQ=255)
                                                       gACGCGGGTTACGATTAACTAACTGAGATATGCGAAAATTGTAGGCCGGACAAGGCGCTCACGCCGCATCCGGCGTTGTTCATTTGCCGTAGATg                                                   <  2:2136263/95‑1 (MQ=25)
                                                        aCGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTc                                             <  2:1163759/100‑1 (MQ=255)
                                                           cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                          <  2:1570169/100‑1 (MQ=255)
                                                           cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                          <  1:1666167/100‑1 (MQ=255)
                                                           cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                          >  1:1095128/1‑100 (MQ=255)
                                                            tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                         >  2:916866/1‑100 (MQ=255)
                                                             ggTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCa                                        >  2:710951/1‑100 (MQ=255)
                                                                ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                     <  2:476348/100‑1 (MQ=255)
                                                                ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                     <  2:697429/100‑1 (MQ=255)
                                                                ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                     <  2:2002963/100‑1 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   <  2:1800028/100‑1 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   >  1:2014526/1‑100 (MQ=255)
                                                                  cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                   >  2:1345535/1‑100 (MQ=255)
                                                                   gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                  >  1:1764783/1‑100 (MQ=255)
                                                                    aTTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTa                                 <  1:1571344/100‑1 (MQ=255)
                                                                       aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                              >  2:1137108/1‑100 (MQ=255)
                                                                        aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                             >  1:1284659/1‑100 (MQ=255)
                                                                         cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                            <  1:929524/100‑1 (MQ=255)
                                                                         cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                            <  2:212221/100‑1 (MQ=255)
                                                                         cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                            >  2:866070/1‑100 (MQ=255)
                                                                          tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                           >  2:1034637/1‑100 (MQ=255)
                                                                           aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                          <  1:1103273/100‑1 (MQ=255)
                                                                            aaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGt                         >  1:1375453/1‑100 (MQ=255)
                                                                               gAAATATGTGAAAATTGTAGGCCGCACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                      <  2:139980/100‑1 (MQ=255)
                                                                                 aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                    <  2:776912/100‑1 (MQ=255)
                                                                                 aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                    <  2:925578/100‑1 (MQ=255)
                                                                                 aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                    <  1:1307386/100‑1 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCGACATCCCGCTTTTTGCATCTGCGGTAGATGACACACATGCATACAGTGTCGCCTGTACGCGTCAg                >  2:649217/1‑100 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                <  2:860865/100‑1 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                >  1:1962341/1‑100 (MQ=255)
                                                                                     tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                <  1:1727294/100‑1 (MQ=255)
                                                                                      gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt               <  2:1353034/100‑1 (MQ=255)
                                                                                      gtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGt               >  2:2122996/1‑100 (MQ=255)
                                                                                       tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt              >  2:1914884/1‑100 (MQ=255)
                                                                                       tgAAAATAGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTTCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                <  2:2086563/98‑1 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATGCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                    >  2:1803672/1‑93 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             <  1:1379273/100‑1 (MQ=255)
                                                                                        gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa             >  2:771704/1‑100 (MQ=255)
                                                                                                tAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctg     <  2:103987/100‑1 (MQ=255)
                                                                                                 aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacaca    <  1:610048‑M2/100‑69 (MQ=255)
                                                                                                 aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgc    <  1:231150/100‑1 (MQ=255)
                                                                                                  ggCCGGACACGGCGCTCGCGCCGCATCCCGCATTGTTCATTTGCTGGAGATCACACTCATGCATACATTATCGCCTGTACGCGCCAGTCGTCAGgctgc    >  2:965740/1‑99 (MQ=38)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  1:2056645/1‑100 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  1:1367131/1‑100 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  2:527782/1‑100 (MQ=255)
                                                                                                  ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAGTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct   >  1:1877168/1‑100 (MQ=255)
                                                                                                   gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca  <  1:412139‑M2/100‑71 (MQ=255)
                                                                                                   gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca  <  2:974374‑M2/100‑71 (MQ=255)
                                                                                                   gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca  <  2:418382‑M2/100‑71 (MQ=255)
                                                                                                   gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca  <  1:1423878‑M2/100‑71 (MQ=255)
                                                                                                   |                                                                                                   
ATTTATTGCTGCGGGCGACGGGGGGAGTGTGTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTG  >  NC_000913/4415863‑4416061

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.