New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 805804 =NA (NA)4 (0.050) 4/164 NT NA noncoding (1/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences
?NC_000913 805836 = NA (NA)noncoding (33/178 nt) REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences REP72 (repetitive extragenic palindromic) element; contains 4 REP sequences

Only 100 of 108 total aligned reads displayed.

AGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805706‑805903
                                                                                                  |                                                                                                   
tgtaggtcggataagatgcgcaaacatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagg                                                                                                     <  1:1993826‑M1/1‑1 (MQ=255)
 gtaggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagtttcgatgcgattcgtagGTc                                                                                                   >  1:2212373‑M1/98‑100 (MQ=255)
  taggtcggataagatgcgcaagcatcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcggtgcgattcgtagGTCg                                                                                                  <  1:965090‑M1/4‑1 (MQ=255)
   gcgAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGG                                                                                                 >  1:854269‑M1/1‑100 (MQ=255)
      agaTTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatg                                                                                              <  2:575134/100‑1 (MQ=255)
         ttATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcga                                                                                           <  2:2187697/100‑1 (MQ=255)
          tATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgat                                                                                          >  1:2251532/1‑100 (MQ=255)
           aTCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGgatgcgatg                                                                                         >  1:1438243/1‑100 (MQ=255)
              aaGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCtt                                                                                      >  2:652773/1‑100 (MQ=255)
              aaGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCtt                                                                                      >  1:1451169/1‑100 (MQ=255)
               aGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTg                                                                                     >  1:826446/1‑100 (MQ=255)
                 gCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGTTGCGATGCTTgtg                                                                                   <  1:1598474/100‑3 (MQ=255)
                 gCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcg                                                                                   <  2:80553/100‑1 (MQ=255)
                 gCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcg                                                                                   <  2:1041617/100‑1 (MQ=255)
                  cGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcgc                                                                                  <  1:1997134/100‑1 (MQ=255)
                  cGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTgcgc                                                                                  <  2:1381408/100‑1 (MQ=255)
                    ggTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCAt                                                                                >  1:1146360/1‑100 (MQ=255)
                    ggTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCAt                                                                                >  2:627110/1‑100 (MQ=255)
                     ttAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCACATTCGGCACTTATTGTCGGATGCGATGCTTGCGCAtn                                                                               <  1:2017767/99‑2 (MQ=255)
                      tattttGATTAACTTCAATAAAAAAAAAAAAAAAAAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCa                                                                                 <  2:1849636/94‑1 (MQ=21)
                       aGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCtt                                                                             <  1:1918623/100‑1 (MQ=255)
                       aGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCtt                                                                             >  1:1551318/1‑100 (MQ=255)
                          ttGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatc                                                                          <  2:899306‑M2/100‑4 (MQ=255)
                          tcgcatccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATc                                                                          >  1:379631‑M1/73‑100 (MQ=255)
                           tGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatcc                                                                         <  2:2091132‑M2/100‑5 (MQ=255)
                            gATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatccg                                                                        <  2:1653182‑M2/100‑6 (MQ=255)
                            gATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatccg                                                                        <  2:1452080‑M2/100‑6 (MQ=255)
                            gATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatccg                                                                        <  1:83709‑M2/100‑6 (MQ=255)
                              ttAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatccgac                                                                      <  1:1477965‑M2/100‑8 (MQ=255)
                              ttAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatccgac                                                                      <  1:1477964‑M2/100‑8 (MQ=255)
                               tccgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     >  1:1133126‑M1/68‑100 (MQ=255)
                               tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATaagatgcgcaagcatcgcatccgaca                                                                     <  1:443453‑M1/100‑27 (MQ=255)
                               tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     <  2:455563/100‑1 (MQ=255)
                               tAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGAcc                                                                     <  1:1035002/100‑1 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATaagatgcgcaagcatcgcatccgacaa                                                                    <  1:1504620‑M1/100‑28 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatccgatct                                                                    <  2:955280‑M2/100‑10 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    >  1:1662065/1‑100 (MQ=255)
                                aaCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCt                                                                    >  1:1662106/1‑100 (MQ=255)
                                 cgacaataagtgccggatgctgcgaaaatgccttatctggcctacagattcgatgcgattcgtagGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa                                                                   >  2:609054‑M1/66‑100 (MQ=255)
                                 aCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa                                                                   >  1:1213811/1‑100 (MQ=255)
                                 aCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa                                                                   <  1:575763/100‑1 (MQ=255)
                                 aCTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTa                                                                   >  1:2081858/1‑100 (MQ=255)
                                  cTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTAc                                                                  <  1:721251/100‑1 (MQ=255)
                                   ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 >  2:2136369/1‑100 (MQ=255)
                                   ttCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACg                                                                 <  1:1573765/100‑1 (MQ=255)
                                    tCAATAAAAACCGTCAGACGTCAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGa                                                                >  2:1105623/1‑100 (MQ=255)
                                      aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              >  1:1028002/1‑100 (MQ=255)
                                      aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              >  1:2062823/1‑100 (MQ=255)
                                      aaTAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAAt                                                              >  1:1002704/1‑100 (MQ=255)
                                         aaaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGc                                                           >  1:379363/1‑100 (MQ=255)
                                          aaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCa                                                          >  2:1408645/1‑100 (MQ=255)
                                          aaaaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCa                                                          >  2:1211540/1‑100 (MQ=255)
                                           tgccggatgccgcgaaaatgcctgatctggcgcacagatgcgatgcgattcgtagTTCCGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCAt                                                         >  1:843450‑M1/56‑100 (MQ=255)
                                            aaCCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATc                                                        <  1:659114/100‑1 (MQ=255)
                                             aCCGTCATATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCg                                                       <  2:826443/100‑1 (MQ=255)
                                               cGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGaa                                                     <  1:878022/100‑1 (MQ=255)
                                                gTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAAt                                                    <  1:2060743/100‑1 (MQ=255)
                                                 tCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATc                                                   <  1:1076992/100‑1 (MQ=255)
                                                 tCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATc                                                   <  2:674066/100‑1 (MQ=255)
                                                  cAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCt                                                  >  2:947389/1‑100 (MQ=255)
                                                    gATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGt                                                >  2:1074515/1‑100 (MQ=255)
                                                    gATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGt                                                <  2:367892/100‑1 (MQ=255)
                                                     aTGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTa                                               >  1:385218/1‑100 (MQ=255)
                                                      tttAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAg                                              >  1:1590064/3‑100 (MQ=255)
                                                       gTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAgg                                             >  1:1149738/1‑100 (MQ=255)
                                                           aaaGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAg                                         <  2:737007/100‑1 (MQ=255)
                                                             aGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTatccgacaatcagtgccgaatgcgacctacattcacat                                       <  2:1972201‑M2/100‑39 (MQ=255)
                                                             aGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGa                                        >  2:1981685/1‑99 (MQ=255)
                                                                gcCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAg                                    <  1:1223900/100‑1 (MQ=255)
                                                                 ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                   <  2:4129/100‑1 (MQ=255)
                                                                 ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                   <  2:2281577/100‑1 (MQ=255)
                                                                 ccATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAgg                                   >  2:1993811/1‑100 (MQ=255)
                                                                    tgtgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAt                                >  1:100763/1‑100 (MQ=255)
                                                                      tgAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGGCCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCAttt                              >  1:1704669/1‑100 (MQ=255)
                                                                           gTAGGTCGCCTTCGGCACTTAATGTCGGATGCGCTGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCgc                          <  1:932643/99‑1 (MQ=255)
                                                                           gTAGGTCGCATTCCGCACTTATTGGCGGATGAGAGGCGTGTGCATCTTATCCGACCTACGATTCGCATTGAGTCTGTAGGCCAGATAAGGGATTTTCg                           <  2:1276158/98‑1 (MQ=21)
                                                                                tCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATc                    >  2:104949/1‑100 (MQ=255)
                                                                                 cGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGAAGGCCAGAAAAGGCATTTTCCCAGAATcc                   >  1:721791/1‑100 (MQ=18)
                                                                                 cGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCGGTAGGCCAGATAAGGCATTTTCGCAGCATc                    >  2:341353/1‑99 (MQ=255)
                                                                                  gCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTTTAGGCCAGATAAGGCATTTTCCCAGCATCCg                  >  2:623811/1‑100 (MQ=255)
                                                                                   cATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCgg                 >  1:113326/1‑100 (MQ=255)
                                                                                   cATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCgg                 <  2:1662095/100‑1 (MQ=255)
                                                                                   cATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCgg                 <  2:1662054/100‑1 (MQ=255)
                                                                                   cATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCgg                 >  2:1240211/1‑100 (MQ=255)
                                                                                    aTTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGc                >  1:1857381/1‑100 (MQ=255)
                                                                                    aTTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAAGCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGc                >  1:573827/1‑100 (MQ=255)
                                                                                       cGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACt             >  1:531762/1‑100 (MQ=255)
                                                                                       cGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACt             <  1:36662/100‑1 (MQ=255)
                                                                                            cTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTg        >  1:1100698/1‑100 (MQ=255)
                                                                                            cTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTg        >  1:1833162/1‑100 (MQ=255)
                                                                                              tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      <  2:1462198/100‑1 (MQ=255)
                                                                                              tATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTc      <  2:2062807/100‑1 (MQ=255)
                                                                                                ttGTCGGATGCGATGCTTGCGCATCTTatccgacaataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagtt    <  1:1504620‑M2/100‑74 (MQ=255)
                                                                                                ttGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCgg    <  2:2051430/100‑1 (MQ=255)
                                                                                                 tGTCGGATGCGATGCTTGCGCATCTTatccgacaataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagtta   <  1:443453‑M2/100‑75 (MQ=255)
                                                                                                 tGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCgg    >  2:1605019/1‑99 (MQ=255)
                                                                                                  gTCGGATaagatgcgcaagcatcgcatccgacaataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaa  <  1:1477964‑M1/100‑94 (MQ=255)
                                                                                                  gTCGGATaagatgcgcaagcatcgcatccgacaataagtgccgaatgcgacctacattcacatggcgctttttacatctgacggtttttattgaagttaa  <  1:1477965‑M1/100‑94 (MQ=255)
                                                                                                  GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat  <  1:1079753‑M1/100‑1 (MQ=255)
                                                                                                  GTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGgat  <  1:207397‑M1/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
AGCGCGAGATTATCAAGGCGGGTAGTTTGATTAACTTCAATAAAAACCGTCAGATGTAAAAAGCGCCATGTGAATGTAGGTCGCATTCGGCACTTATTGTCGGATGCGATGCTTGCGCATCTTATCCGACCTACGAATCGCATCGAATCTGTAGGCCAGATAAGGCATTTTCGCAGCATCCGGCACTTATTGTCGGAT  >  NC_000913/805706‑805903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.