New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20668320 (0.000)11 (0.140) 8/160 NT 100% noncoding (522/1195 nt) IS5 repeat region
?NC_000913 = 2066857 NA (NA)noncoding (497/1195 nt) IS5 repeat region

Only 100 of 112 total aligned reads displayed.

CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931
                                                                                                   |                                                                                                   
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:1148667‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:999095‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:1939333‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:526228‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:507431‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:1953269‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:2081310‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:2149493‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCAGCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:448018‑M1/100‑1 (MQ=255)
    gACACCAATGTGGGCATTCATGCCAAAGTGCCACTGATTACCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtctg                                                                                                 >  2:143915‑M1/1‑96 (MQ=255)
       acCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccacc                                                                                              >  2:1179325‑M1/1‑93 (MQ=255)
        ccAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccacca                                                                                             >  1:1529776‑M1/1‑92 (MQ=255)
                     tCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcaccgttaacgc                                                                                <  2:1529767‑M1/100‑22 (MQ=255)
                               gTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgacc                                                                      <  2:1819711‑M1/100‑32 (MQ=255)
                                  ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  2:131846‑M1/100‑35 (MQ=255)
                                  ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  1:1179330‑M1/100‑35 (MQ=255)
                                    aCTGATTGCCTATCTTCGGCTGATGCATCGCCGGATCGCGTTGCTGCTCTTTATCCCTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  2:736055‑M1/100‑37 (MQ=255)
                                     cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  1:2030755‑M1/100‑38 (MQ=255)
                                     cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTCCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  1:2192264‑M1/100‑38 (MQ=255)
                                                                                          cattggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtg           <  2:1086514‑M1/98‑91 (MQ=255)
                                                                                           nttgGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:1392819‑M1/2‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2273985‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2109157‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:41385‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2331887‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:284485‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:1165528‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:1281297‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:1620962‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:292643‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:380753‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:398694‑M1/100‑92 (MQ=255)
                                                                                            ttGTTCGAtgccaccatcattgaggcccccagctcgaccaagaacaaagtgcagcaccgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1121976‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:634747‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:554937‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:543643‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  2:1514644‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:594007‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1357780‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1481116‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1518055‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2145755‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1578358‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:19844‑M1/100‑93 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagatcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1094408‑M1/99‑93 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagactaagaaaggcaatcagtggca        >  1:1283755‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:1860711‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        <  1:2238516‑M1/100‑94 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:1765028‑M1/1‑7 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:763053‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       <  2:1275326‑M1/100‑95 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:425219‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcaatacggagatgcatcagaccaagaaagcaactcagtggcac       >  2:2146400‑M1/1‑6 (MQ=255)
                                                                                               gTCGAtgccaccatcattgcggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcataccaagaaaggcaatcagtggca        >  1:970263‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaattagtggcact      <  1:2143600‑M1/100‑96 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:2325979‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:578025‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:393537‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:1969526‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:2612‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:1861473‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgagacacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1626331‑M1/1‑5 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  2:1813642‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  2:58121‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  1:1229327‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  2:1718702‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccgcagatgcatcagaccaagaaaggcaatcagtcgcactt     >  2:2032731‑M1/1‑4 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:718264‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:557353‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  1:1104188‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:2271562‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:1372732‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:1264645‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:1411260‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:409420‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggaacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgtcactt     >  2:1436001‑M1/1‑3 (MQ=255)
                                                                                                  gAtgccacgatcattgagtcacccatctcgtccaagaagaaagagcagcatcgcgttccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:687717‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgcccaagaacaaagagcagcaacgcgatccggagatgcatccgaccaagaaaggcaatcagtggcacttt    >  2:46258‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgatcaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:2006583‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:2116751‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:199318‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:1918811‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:2116612‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:263689‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:1921089‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:2129736‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1244658‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  1:1457765‑M1/1‑2 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:1923384‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:1183809‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  2:72950‑M1/1‑1 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  2:72794‑M1/1‑1 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:703255‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:176609‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:1695349‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:1479209‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  1:1347520‑M1/1‑1 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:255335‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:2166454‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgacgcacccagctcgaccaagaacaaagagcagcaacgcgatccgtagatgcatcagaccaagaaaggcaatcagtggcacttt    <  2:468052‑M1/98‑98 (MQ=255)
                                                                                                   |                                                                                                   
CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.