BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2568185 =	NA (NA)	7 (0.100) +ACCCGCTACACACCCCGCAG	3/138	NT	NA	noncoding (47/183 nt)	REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences	REP178 (repetitive extragenic palindromic) element; contains 4 REP sequences
*	?	NC_000913	= 3217522	NA (NA)	7 (0.100) +ACCCGCTACACACCCCGCAG	3/138	NT	NA	noncoding (89/89 nt)	REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP229 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 144 total aligned reads displayed.

TGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATCC  >  NC_000913/2568086‑2568283

tgatgaTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCg                                                                                                    >  1:943506/1‑100 (MQ=255)

tgatgaTTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCg                                                                                                    >  2:1998150/1‑100 (MQ=255)

ngatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCg                                                                                                    >  1:1069889/2‑100 (MQ=255)

 gatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGt                                                                                                   <  2:1040567/100‑1 (MQ=255)

 gatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGt                                                                                                   <  1:908216/100‑1 (MQ=255)

 gatgatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGt                                                                                                   <  2:1352422/100‑1 (MQ=255)

   ngatTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAg                                                                                                 >  2:1181642/2‑100 (MQ=255)

      tttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCt                                                                                              >  1:1070962/1‑100 (MQ=255)

      tttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCACGTAGGCt                                                                                              >  2:242105/1‑100 (MQ=255)

       ttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCCATCCCGTAGGccg                                                                                             <  1:1597857/100‑3 (MQ=255)

       ttCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTg                                                                                             <  1:939681/100‑1 (MQ=255)

        tCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTgg                                                                                            <  2:593953/100‑1 (MQ=255)

         cGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGa                                                                                           >  1:575049/1‑100 (MQ=255)

          gTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                                                                          <  1:1199280/100‑1 (MQ=255)

          gTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                                                                          <  2:528991/100‑1 (MQ=255)

          gTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGAt                                                                                          <  2:60626/100‑1 (MQ=255)

           ttAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATa                                                                                         >  1:3342/1‑100 (MQ=255)

            tAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATaa                                                                                        <  2:1772672/100‑1 (MQ=255)

             aaTTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAg                                                                                       <  2:883104/100‑1 (MQ=255)

                  ccATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGAcgcg                                                                                  >  1:1485343/1‑100 (MQ=255)

                    aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                                                                >  1:1022608/1‑100 (MQ=255)

                    aTCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGc                                                                                <  2:2282932/100‑1 (MQ=255)

                        ccTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGc                                                                            <  1:1127869/100‑1 (MQ=255)

                         cTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCg                                                                           <  1:964022/100‑1 (MQ=255)

                            tACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCg                                                                        <  2:796739/100‑1 (MQ=255)

                             aCTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGc                                                                       >  1:1681539/1‑100 (MQ=255)

                                cccTGTTAGGTGTTATGTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTTCAAGCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATc                                                                    >  1:2238856/1‑100 (MQ=17)

                                   tGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGTCAAGCGTCGCATCCgg                                                                 <  2:1073946/100‑1 (MQ=255)

                                    gattgctcctatctattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGATGCGGCAAGCGTCGCATCCGGc                                                                <  2:1022603/91‑1 (MQ=11)

                                      tAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCaa                                                              >  2:706103/1‑100 (MQ=255)

                                       aGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTACGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAt                                                             <  1:1655020/100‑1 (MQ=255)

                                        gttgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAAtt                                                            >  1:541986/1‑100 (MQ=255)

                                          tgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTCGGCTGGATAAGACGCGGCAAGCGTCGCCTCCGGCAATTGc                                                          >  1:1964665/1‑100 (MQ=255)

                                          tgttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGc                                                          <  2:1572055/100‑1 (MQ=255)

                                           gttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCGGGAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCACTTgta                                                         >  2:144531/1‑98 (MQ=17)

                                           gttATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCa                                                         >  1:1323026/1‑100 (MQ=255)

                                            ttatttatTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAc                                                        <  1:1447542/100‑1 (MQ=255)

                                            ttatttatTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAc                                                        <  1:25505/100‑1 (MQ=255)

                                            ttatttatTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAc                                                        <  1:514176/100‑1 (MQ=255)

                                             tatttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAcc                                                       >  2:1552308/1‑100 (MQ=255)

                                             tatttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAcc                                                       >  1:1551577/1‑100 (MQ=255)

                                              ggcctgataagatgcgccagcatcgcatcaggcctgcggggtgtgtagcgggtGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACcg                                                      <  1:26639‑M1/47‑1 (MQ=255)

                                              ggcctgataagatgcgccagcatcgcatcaggcctgcggggtgtgtagcgggtGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACcg                                                      <  1:1193952‑M1/47‑1 (MQ=255)

                                              atttattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACcg                                                      >  1:576218/1‑100 (MQ=255)

                                               gcctgataagatgcgccagcatcgcatcaggcctgcggggtgtgtagcgggtGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACcgc                                                     <  1:1699502‑M1/48‑1 (MQ=255)

                                                 tattGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCgcgc                                                   >  1:793062/1‑100 (MQ=255)

                                                    gggCGGATAAGGCGTTTACGCCGCATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCAc                                                >  1:2106331/2‑100 (MQ=17)

                                                     taagatgcgccagcatcgcatcaggcctgcggggtgtgtagcgggtGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt                                               <  2:1348212‑M1/54‑1 (MQ=255)

                                                     taagatgcgccagcatcgcatcaggcctgcggggtgtgtagcgggtGTAGGCCGGATAAGGCGCGTCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt                                               <  2:1722744‑M1/54‑1 (MQ=255)

                                                     ggCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt                                               >  1:872284/1‑100 (MQ=255)

                                                     ggCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACt                                               <  1:44936/100‑1 (MQ=255)

                                                     ggCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTACTCCGCGGCAc                                                >  2:382427/1‑99 (MQ=255)

                                                      gCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTg                                              >  1:695581/1‑100 (MQ=255)

                                                       cGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTgg                                             >  1:987470/1‑100 (MQ=255)

                                                         gATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCg                                           <  1:1277913/100‑1 (MQ=255)

                                                          aTGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCgg                                          <  1:1181954/100‑1 (MQ=255)

                                                             cggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATg                                       >  1:349357/1‑100 (MQ=255)

                                                             cggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATg                                       >  1:1778417/1‑100 (MQ=255)

                                                             cggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATg                                       <  1:2191553/100‑1 (MQ=255)

                                                              ggcgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATgc                                      >  1:1856359/1‑100 (MQ=255)

                                                                cgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATgcgg                                    >  2:1668973/1‑100 (MQ=255)

                                                                cgTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATgcgg                                    >  2:2116481/1‑100 (MQ=255)

                                                                  tAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATgcggc                                   <  2:1447513/99‑1 (MQ=255)

                                                                   aaaCGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGt                                 >  1:1398338/1‑100 (MQ=255)

                                                                    aaCGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTg                                <  2:262036/100‑1 (MQ=255)

                                                                    aaCGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTg                                >  1:2126936/1‑100 (MQ=255)

                                                                    aaCGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTg                                <  1:506570/100‑1 (MQ=255)

                                                                     aCGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGa                               >  1:1011786/1‑100 (MQ=255)

                                                                     aCGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGa                               <  1:966637/100‑1 (MQ=255)

                                                                      cGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGaa                              >  2:1535428/1‑100 (MQ=255)

                                                                      cGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACGGGCGGATGCGGCGttc                               <  2:1560995/99‑3 (MQ=255)

                                                                      cGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCAACGGCGGGACCGGCGTGa                               >  1:2200055/1‑99 (MQ=17)

                                                                           tATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCt                         <  2:278985/100‑1 (MQ=255)

                                                                            aTCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCtt                        >  1:1495462/1‑100 (MQ=255)

                                                                             tCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTa                       >  1:1037891/1‑100 (MQ=255)

                                                                             tCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTa                       <  1:1981154/100‑1 (MQ=255)

                                                                                gCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATcc                    <  1:1078697/100‑1 (MQ=255)

                                                                                gCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATcc                    >  2:56653/1‑100 (MQ=255)

                                                                                gCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCAACGCGCCACGTGCGGAGGCGGCGTg                                >  2:2302708/1‑88 (MQ=18)

                                                                                  ccTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGc                  <  1:62171/100‑1 (MQ=255)

                                                                                    tACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGGGGCGGCGCGAACGCCTTATCCGccc                >  2:2127531/1‑100 (MQ=255)

                                                                                     ccgatctcAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCt               <  1:712471/93‑1 (MQ=255)

                                                                                      cATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCCCCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTa              <  1:921424/100‑1 (MQ=255)

                                                                                        tgtgCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACa            >  1:212844/1‑100 (MQ=255)

                                                                                        tgtgCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGGGAACGCCTTATCCGCCCtcc             >  2:2055791/1‑97 (MQ=255)

                                                                                         gtgCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTACATCGCGCCGCCGTCGGAGGCGGCATGAACGCCTTacctggc                 >  2:828329/1‑88 (MQ=17)

                                                                                          tgCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtg          <  1:1998165/100‑1 (MQ=255)

                                                                                          tgCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtg          <  2:541983/100‑1 (MQ=255)

                                                                                           gCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgt         >  1:876598/1‑100 (MQ=255)

                                                                                            cAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTAGAtcgg        >  2:712468/1‑97 (MQ=255)

                                                                                            cAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACCtgtg        >  2:376712/1‑100 (MQ=255)

                                                                                            cAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACAtgtg        <  2:1433598/100‑1 (MQ=255)

                                                                                             aagcccGTAGTCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGc       <  2:773485/97‑1 (MQ=255)

                                                                                              aTCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCa      >  1:2088432/1‑100 (MQ=255)

                                                                                                cccGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAAt    >  1:1788723/1‑100 (MQ=255)

                                                                                                 ccGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATc   >  1:1989431/1‑100 (MQ=255)

                                                                                                 ccGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATc   >  1:42986/1‑100 (MQ=255)

                                                                                                 ccGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATc   >  1:66288/1‑100 (MQ=255)

                                                                                                 ccGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATc   >  2:1734913/1‑100 (MQ=255)

                                                                                                 ccGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATc   <  2:1667749/100‑1 (MQ=255)

TGATGATTTCGTTAATTCCCATCGCCTTTACTCCCTGTTAGTTGTTATTTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACATGTGCAATCCCGTAGGCTGGATAAGACGCGGCAAGCGTCGCATCCGGCAATTGCACCGCGCCACTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATGTGCAATCC  >  NC_000913/2568086‑2568283

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.