New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3625632NA (NA)3 (0.040) 3/166 NT NA noncoding (44/82 nt) RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3625670 NA (NA)noncoding (82/82 nt) RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

GTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGC  >  NC_000913/3625571‑3625769
                                                                                                   |                                                                                                   
gTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGC                                                                                                     <  2:1536566‑M2/100‑1 (MQ=255)
  tttGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaa                                                                                                   <  2:996869‑M2/100‑3 (MQ=255)
   ttGGGAGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaat                                                                                                  >  2:2083785‑M2/1‑97 (MQ=255)
     gggggTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTg                                                                                                <  1:903615/100‑1 (MQ=255)
     gggggTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTg                                                                                                <  1:1510354/100‑1 (MQ=255)
      ggggTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTgn                                                                                               <  2:609642/100‑2 (MQ=255)
        ggTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTAt                                                                                             >  2:583167/1‑100 (MQ=255)
         gTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTAtt                                                                                            <  2:1575169/100‑1 (MQ=255)
           cAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTa                                                                                          >  1:1040150/1‑100 (MQ=255)
             gTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACg                                                                                        >  1:396517/1‑100 (MQ=255)
              ttCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGc                                                                                       <  2:528576/100‑1 (MQ=255)
               tCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGcc                                                                                      <  1:741344/100‑1 (MQ=255)
               tCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTACCTATAAGCTTACGCATCGGGCAATTGTATTTACGcc                                                                                      >  1:1202539/1‑100 (MQ=255)
                 aTAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCAt                                                                                    >  2:241153/1‑100 (MQ=255)
                   aaaCGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTg                                                                                  >  2:237828/1‑100 (MQ=255)
                    aaCGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGt                                                                                 <  1:1695577/100‑1 (MQ=255)
                    aaCGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGt                                                                                 >  1:1972508/1‑100 (MQ=255)
                      cGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTcc                                                                               >  2:26018/1‑100 (MQ=255)
                       gCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTccc                                                                              <  1:1674529/100‑1 (MQ=255)
                       gCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTccc                                                                              <  2:351622/100‑1 (MQ=255)
                        ccTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCa                                                                             >  2:915403/1‑100 (MQ=255)
                            aTCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCg                                                                         >  2:621913/1‑100 (MQ=255)
                            aTCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCg                                                                         <  1:95143/100‑1 (MQ=255)
                             tCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGt                                                                        >  1:151487/1‑100 (MQ=255)
                               cGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCt                                                                      <  1:1289737/100‑1 (MQ=255)
                               cGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCt                                                                      <  1:2268488/100‑1 (MQ=255)
                                  ccTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTcc                                                                   >  2:948322/1‑100 (MQ=255)
                                  ccTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTcc                                                                   <  2:200085/100‑1 (MQ=255)
                                  ccTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTAATTACGCCATTGTACCAATCGTCTTcc                                                                   <  2:200243/100‑1 (MQ=255)
                                    tAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTg                                                                 <  1:341144/100‑1 (MQ=255)
                                    tAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTg                                                                 >  1:1572373/1‑100 (MQ=255)
                                     aaaaaCAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGa                                                                >  2:2143097/1‑100 (MQ=255)
                                        aacaacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATc                                                             <  1:1695128/100‑1 (MQ=255)
                                             cTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGTCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgcagc                                                        >  2:1497205/1‑100 (MQ=255)
                                             cTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgcagc                                                        <  1:360405/100‑1 (MQ=255)
                                              tAAAATTCAATAAATTGCACCGATGCGTACTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACCCCATTGTCCCAATCGTCTTCCTGAATCgcagca                                                       <  2:1414755/100‑1 (MQ=255)
                                               aaaaTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGcagcag                                                      >  2:198838/1‑100 (MQ=255)
                                                   ttCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatttattgaattttagttgtttttaggccggataaggcgtttatgaactg                                                  <  1:1318968‑M2/100‑52 (MQ=255)
                                                     cAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAAt                                                >  1:1137015/1‑100 (MQ=255)
                                                       atatttttcACCGATGTGTTGTCCCTATAGGTGTGCGCTTTTGTCATTTGTATTTTCGTTATTGGCCCAATCTGCTTCCTGAATCGCAGCAGCGCAATgg                                              <  1:1372454/92‑1 (MQ=255)
                                                       aTAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATAGCAGCAGCGCAATg                                               >  2:482988/1‑99 (MQ=255)
                                                        tAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATgg                                              <  2:1643023/99‑1 (MQ=255)
                                                         aaaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTg                                            <  2:1090802/100‑1 (MQ=255)
                                                         aaaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTg                                            <  2:1914929/100‑1 (MQ=255)
                                                         aaaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTg                                            <  1:583170/100‑1 (MQ=255)
                                                            ttGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGaaa                                         <  2:151486/100‑1 (MQ=255)
                                                             tGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgacccccaaaa                                        <  1:2044508‑M2/100‑62 (MQ=255)
                                                              gCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgacccccaaaac                                       <  1:322096‑M2/100‑63 (MQ=255)
                                                               cACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAAt                                      >  2:1582996/1‑100 (MQ=255)
                                                               cACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAAt                                      <  1:263595/100‑1 (MQ=255)
                                                                atcGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATg                                     <  2:1429518/98‑1 (MQ=255)
                                                                aCCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATg                                     >  2:1668054/1‑100 (MQ=255)
                                                                aCCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATg                                     >  2:489195/1‑100 (MQ=255)
                                                                 ccGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATgc                                    >  1:1224688/1‑100 (MQ=255)
                                                                 ccGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATg                                     >  1:2097087/1‑99 (MQ=255)
                                                                  cGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATgcg                                   <  2:496072/100‑1 (MQ=255)
                                                                   gATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATgcgc                                  >  2:227545/1‑100 (MQ=255)
                                                                   gATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATgcgc                                  <  2:2209799/100‑1 (MQ=255)
                                                                   gATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATgcgc                                  >  1:1240837/1‑100 (MQ=255)
                                                                    aTGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGcgcc                                 <  1:1992498/100‑1 (MQ=255)
                                                                         tAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCaa                            >  1:1088689/1‑100 (MQ=255)
                                                                          aGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAAt                           >  2:1658226/1‑100 (MQ=255)
                                                                          aGTCCCTATAAGCATACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAAt                           >  1:1598179/1‑100 (MQ=255)
                                                                           gTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAAtt                          <  2:2294888/100‑1 (MQ=255)
                                                                           gTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAAtt                          >  2:1776881/1‑100 (MQ=255)
                                                                            tCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTg                         <  2:2306512/100‑1 (MQ=255)
                                                                            tCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTg                         <  1:1362666/100‑1 (MQ=255)
                                                                             cccTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGc                        >  2:216089/1‑100 (MQ=255)
                                                                             cccTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGc                        >  1:1083777/1‑100 (MQ=255)
                                                                              ccTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGcc                       >  1:1150567/1‑100 (MQ=255)
                                                                              acTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCACAATCGTCTTCCTGAATGGCAGAAGCGAAATGGTGAAAAATGCGCTGCCAATTGcc                       >  1:720620/2‑100 (MQ=255)
                                                                               cTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCa                      >  1:768766/1‑100 (MQ=255)
                                                                                 ataAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATc                    >  2:852927/1‑100 (MQ=255)
                                                                                    aGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGc                 >  1:407156/1‑100 (MQ=255)
                                                                                     gCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCg                <  2:1972493/100‑1 (MQ=255)
                                                                                     gCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCg                <  1:1245795/100‑1 (MQ=255)
                                                                                     gCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCg                >  1:1917586/1‑100 (MQ=255)
                                                                                        tACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCa             >  2:962724/1‑100 (MQ=255)
                                                                                        tACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCa             <  1:1208444/100‑1 (MQ=255)
                                                                                        tACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCa             >  2:2068655/1‑100 (MQ=255)
                                                                                         aCGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAAAGAAAAAAAAAAAAATGCGCCGCCAATTGCCATCAGCGTc              <  2:1105309/98‑1 (MQ=255)
                                                                                          cGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGa           >  2:1779851/1‑100 (MQ=255)
                                                                                              tCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACt       <  1:431175/100‑1 (MQ=255)
                                                                                              tCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACt       >  1:827978/1‑100 (MQ=255)
                                                                                               cGGGCAATTGTATTTACGCCATTGTACCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAACATGCGCCGCCAATTGCCATCAGCGTCAGAAACTg      >  2:809094/1‑100 (MQ=255)
                                                                                                gggCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGc     <  1:618247/100‑1 (MQ=255)
                                                                                                gggCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGc     >  2:1611596/1‑100 (MQ=255)
                                                                                                gggCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGc     >  2:1821385/1‑100 (MQ=255)
                                                                                                 ggCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCg    <  1:198839/100‑1 (MQ=255)
                                                                                                 ggCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCg    <  1:996874/100‑1 (MQ=255)
                                                                                                 ggCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCg    >  2:1141691/1‑100 (MQ=255)
                                                                                                 ggCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCg    <  1:1113065/100‑1 (MQ=255)
                                                                                                  gCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCgg   <  2:81693/100‑1 (MQ=255)
                                                                                                   cAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCgg   <  2:1147327/99‑1 (MQ=255)
                                                                                                   cAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGc  <  1:228568/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAAATGCGCCGCCAATTGCCATCAGCGTCAGAAACTGCGGC  >  NC_000913/3625571‑3625769

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.