New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3898636NA (NA)3 (0.040) 3/162 NT NA noncoding (6/26 nt) REP282 (repetitive extragenic palindromic) element; contains 1 REP sequences REP282 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 3898650 NA (NA)noncoding (20/26 nt) REP282 (repetitive extragenic palindromic) element; contains 1 REP sequences REP282 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 110 total aligned reads displayed.

TATCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT  >  NC_000913/3898553‑3898749
                                                                                                 |                                                                                                   
tATCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACAtc                                                                                                   <  2:371653‑M2/100‑3 (MQ=255)
  tctcTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACAtccg                                                                                                 >  1:2076564‑M2/1‑96 (MQ=255)
   ctctTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACAtccgg                                                                                                <  2:362948‑M2/100‑6 (MQ=255)
     ctTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACAtccggcc                                                                                              >  1:1165995‑M2/1‑93 (MQ=255)
     atccttcgctgatggtaatcgctgataaagccgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGcc                                                                                              >  1:74989‑M1/72‑100 (MQ=255)
      tccttcgctgatggtaatcgctgataaagctgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCt                                                                                             >  1:1849505‑M1/71‑100 (MQ=255)
       tCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCtt                                                                                            <  2:890077/100‑1 (MQ=255)
       tCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCtt                                                                                            <  2:1686021/100‑1 (MQ=255)
         cGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTAt                                                                                          >  1:1787646/1‑100 (MQ=255)
          gCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTAtt                                                                                         <  2:1040425/100‑1 (MQ=255)
             gTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCt                                                                                      >  2:749896/1‑100 (MQ=255)
              tgatggtaatcgctgataaagccgctgccgcagaagtagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCt                                                                                      >  2:929046‑M1/63‑99 (MQ=255)
              tctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCtt                                                                                     <  2:1102089/100‑1 (MQ=255)
              tctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCtt                                                                                     <  2:1207723/100‑1 (MQ=255)
               gatggtaatcgctgataaagccgctgccgcagaattagcactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                    >  2:300683‑M1/62‑100 (MQ=255)
               gatggtaatcgctgataaagccgctgccgcagaattagaactcggttaagcttaagaaataAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                    >  2:256945‑M1/62‑100 (MQ=255)
               ctcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTa                                                                                    <  1:1847703/100‑1 (MQ=255)
                tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                   >  2:1987335/1‑100 (MQ=255)
                tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                   >  1:61961/1‑100 (MQ=255)
                tcCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTaa                                                                                   >  2:1987538/1‑100 (MQ=255)
                 ccACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTTTTTTTTTTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAg                                                                                  >  2:247124/1‑100 (MQ=255)
                 ccACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAg                                                                                  >  2:2341369/1‑100 (MQ=255)
                    cTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCtt                                                                               >  2:1381165/1‑100 (MQ=255)
                    cTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCtt                                                                               >  2:1384182/1‑100 (MQ=255)
                     tGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTa                                                                              <  1:2312084/100‑1 (MQ=255)
                      ncGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTaa                                                                             >  2:128659/2‑100 (MQ=255)
                        ggCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAAcc                                                                           >  2:1909808/1‑100 (MQ=255)
                         gCAAGCTGGGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCg                                                                          <  1:645559/100‑1 (MQ=255)
                         gCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTCAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCg                                                                          >  2:1264011/1‑100 (MQ=255)
                            aGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGt                                                                       <  2:1893059/100‑1 (MQ=255)
                            aGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGt                                                                       <  2:1955072/100‑1 (MQ=255)
                             gCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTg                                                                      <  2:1385770/100‑1 (MQ=255)
                              cTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGc                                                                     <  1:949138/100‑1 (MQ=255)
                                gagaCTGTGGGGTGATTTTTCGTAGTTATTTAAATAAAGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTa                                                                   >  2:1262692/1‑100 (MQ=255)
                                  gaCTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAAt                                                                 >  2:1813974/1‑100 (MQ=255)
                                    cTGTGGGGTGATTTTTTTTTTTTTTTTAAATAATGAGAACAGGCCGGAGCGTATTTCACACATCCGGCCTTATATCTTAAGCTTAACCGAGTGCTAAt                                                                 >  2:160207/1‑98 (MQ=255)
                                    cTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTc                                                               <  1:1702488/100‑1 (MQ=255)
                                      gtgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTg                                                             >  2:1204914/1‑100 (MQ=255)
                                       tgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCt                                                              >  2:1819552/1‑98 (MQ=255)
                                       tgGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGc                                                            >  1:1612374/1‑100 (MQ=255)
                                        ggggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCg                                                           >  1:1443227/1‑100 (MQ=255)
                                        ggggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCg                                                           <  1:24379/100‑1 (MQ=255)
                                         gggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCgg                                                          <  1:874586/100‑1 (MQ=255)
                                          ggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGc                                                         >  1:761807/1‑100 (MQ=255)
                                          ggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGc                                                         >  2:2047819/1‑100 (MQ=255)
                                          ggTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGc                                                         <  1:1731446/100‑1 (MQ=255)
                                           gTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCa                                                        >  2:2177566/1‑100 (MQ=255)
                                              aTTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCg                                                     >  2:2355944/1‑100 (MQ=255)
                                                    cGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATGTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTa                                               >  2:1651790/1‑100 (MQ=255)
                                                     gTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTAt                                              >  1:1162592/1‑100 (MQ=255)
                                                      tAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATc                                             >  2:1005704/1‑100 (MQ=255)
                                                      tAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATc                                             <  2:1351466/100‑1 (MQ=255)
                                                       aGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCa                                            <  2:155426/100‑1 (MQ=255)
                                                       aGTTATGTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATc                                             <  1:55477/99‑1 (MQ=255)
                                                        gTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAg                                           <  2:988806/100‑1 (MQ=255)
                                                         ttATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGc                                          <  2:1156527/100‑1 (MQ=255)
                                                         ttATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGc                                          <  1:1296854/100‑1 (MQ=255)
                                                          tATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCg                                         >  1:297242/1‑100 (MQ=255)
                                                           aTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                        <  1:1994309/100‑1 (MQ=255)
                                                           aTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                        >  2:1530996/1‑100 (MQ=255)
                                                           aTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                        <  1:380158/100‑1 (MQ=255)
                                                           aTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                        <  2:1612363/100‑1 (MQ=255)
                                                           aTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                        <  1:1381173/100‑1 (MQ=255)
                                                           aTTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGa                                        <  1:1384190/100‑1 (MQ=255)
                                                            tttAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGAt                                       <  1:1390910/100‑1 (MQ=255)
                                                              tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                     >  2:906533/1‑100 (MQ=255)
                                                              tAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACAGAGTGCTACTTCTGCGGCAGCGGCTTTATCACCGATTa                                     >  2:1286713/1‑100 (MQ=255)
                                                               aaaTAATGAGAACAGGCCGGAGCGTAATTCCCAGATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTAGCAGCGATTAc                                    >  2:1543187/1‑100 (MQ=255)
                                                               aaaTAATGAGAACAGGCCGGAGCGTAATTCACACAtccggcctgttctcattatttaaataactacgaaaaatcaccccacagtctcagcttgccgcagt                                    <  2:97906‑M2/100‑66 (MQ=255)
                                                               aaaTAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTa                                     >  2:1703586/1‑99 (MQ=255)
                                                               aaaTAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAc                                    <  1:1264016/100‑1 (MQ=255)
                                                                aataatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTAcc                                   <  1:518522/100‑1 (MQ=255)
                                                                  taatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCAt                                 <  1:1001227/100‑1 (MQ=255)
                                                                  taatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCAt                                 >  2:950378/1‑100 (MQ=255)
                                                                   aatGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATc                                >  1:1054304/1‑100 (MQ=255)
                                                                    atGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCa                               <  1:391498/100‑1 (MQ=255)
                                                                     tGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAg                              <  1:371656/100‑1 (MQ=255)
                                                                       agaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCg                            >  1:1391465/1‑100 (MQ=255)
                                                                       agaACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCg                            <  1:91527/100‑1 (MQ=255)
                                                                          aCAGGCCGGAGCGTAATTCACACAtccggcctgttctcattatttaaataactacgaaaaatcaccccacagtctcagcttgccgcagtggagacagcgg                         <  1:1161416‑M2/100‑77 (MQ=255)
                                                                          aCAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAg                         <  2:1054299/100‑1 (MQ=255)
                                                                          aCAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAg                         <  1:1009431/100‑1 (MQ=255)
                                                                           cAGGCCGGAGCGTAATTCACACAtccggcctgttctcattatttaaataactacgaaaaatcaccccacagtctcagcttgccgcagtggagacagcgga                        <  1:233505‑M2/100‑78 (MQ=255)
                                                                           cAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAgg                        <  1:2159827/100‑1 (MQ=255)
                                                                           cAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAgg                        <  1:101894/100‑1 (MQ=255)
                                                                           cAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAgg                        >  2:1992475/1‑100 (MQ=255)
                                                                            AGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCATCGATTACCATCAGCGAAGGa                       >  2:647650‑M1/1‑100 (MQ=255)
                                                                             GGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAt                      <  2:374872‑M1/100‑1 (MQ=255)
                                                                             GGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGAt                      <  2:916766‑M1/100‑1 (MQ=255)
                                                                               CCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGc                    >  1:1036111‑M1/1‑100 (MQ=255)
                                                                                  GAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGc                 >  2:2238197‑M1/1‑100 (MQ=255)
                                                                                     cGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCtac              >  2:1424448/1‑98 (MQ=255)
                                                                                        aaTTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAac           >  2:540473/1‑100 (MQ=255)
                                                                                        aaTTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAac           >  2:1017578/1‑100 (MQ=255)
                                                                                        aaTTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAac           >  1:26810/1‑100 (MQ=255)
                                                                                          ttCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAacac         >  2:1099494/1‑100 (MQ=255)
                                                                                           tCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACg        <  1:1056227/100‑1 (MQ=255)
                                                                                           tCACACATCCGGCCTTATTTCTTAAGCTTAACCAAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACg        >  2:1546463/1‑100 (MQ=255)
                                                                                             acacaTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGa      >  2:519354/1‑100 (MQ=255)
                                                                                                 aTCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCt  >  1:517250/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
TATCTCTTCCGCTGTCTCCACTGCGGCAAGCTGAGACTGTGGGGTGATTTTTCGTAGTTATTTAAATAATGAGAACAGGCCGGAGCGTAATTCACACATCCGGCCTTATTTCTTAAGCTTAACCGAGTGCTAATTCTGCGGCAGCGGCTTTATCAGCGATTACCATCAGCGAAGGATGCAGCTGCAACACGGAAGCT  >  NC_000913/3898553‑3898749

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.