New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4332016 =NA (NA)3 (0.040) 3/160 NT NA noncoding (3/32 nt) REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences REP326 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 4332047 = NA (NA)intergenic (+43/‑69) proP/pmrR proline/glycine betaine transporter/putative membrane‑bound BasS regulator

Only 100 of 115 total aligned reads displayed.

TTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTA  >  NC_000913/4331950‑4332146
                                                                                                 |                                                                                                   
tttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAAtt                                                                                                   <  2:1950754/100‑1 (MQ=255)
 ttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTg                                                                                                  <  2:2321511/100‑1 (MQ=255)
 ttGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGAATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTg                                                                                                  <  1:1661233/100‑1 (MQ=255)
   gCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGaa                                                                                                <  2:350362/100‑1 (MQ=255)
   gCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGaa                                                                                                >  2:523401/1‑100 (MQ=255)
    cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                               >  2:561051/1‑100 (MQ=255)
    cAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAc                                                                                               <  2:490587/100‑1 (MQ=255)
     acgCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAct                                                                                              >  1:1590796/3‑100 (MQ=255)
     aGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAAct                                                                                              <  1:474105/100‑1 (MQ=255)
      ggCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                             >  2:940955/1‑100 (MQ=255)
      ctccgttaacctggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActc                                                                                             >  1:855212‑M1/61‑100 (MQ=255)
       gCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAActct                                                                                            <  1:1124078/100‑1 (MQ=255)
        cGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCtt                                                                                           >  2:813441/1‑100 (MQ=255)
        cGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCtt                                                                                           >  1:104400/1‑100 (MQ=255)
        cGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCtt                                                                                           >  1:2117897/1‑100 (MQ=255)
         gAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTa                                                                                          <  2:701698/100‑1 (MQ=255)
         gAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTa                                                                                          >  2:1061177/1‑100 (MQ=255)
          aaaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTaa                                                                                         >  2:508397/1‑100 (MQ=255)
           aaCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAg                                                                                        >  1:765254/1‑100 (MQ=255)
            aCGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAgg                                                                                       <  1:479659/100‑1 (MQ=255)
              gTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGtt                                                                                     >  2:2249652/1‑100 (MQ=255)
                aCCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCa                                                                                   >  2:1107857/1‑100 (MQ=255)
                 tggaggagagtatgcgcgtcagagattaagtgaaccttaagagttcaatTGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCAc                                                                                  >  1:152344‑M1/50‑100 (MQ=255)
                  ccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACt                                                                                 >  1:1764892/1‑100 (MQ=255)
                  ccGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACt                                                                                 >  1:1463666/1‑100 (MQ=255)
                   cGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACtt                                                                                <  1:1052199/100‑1 (MQ=255)
                      cTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAt                                                                             <  1:508400/100‑1 (MQ=255)
                       tGGTGCAGCAACATCCGCGAATTGATGTATAAGCTAGAACGGATGACCTGATGGGCCGCTGTCTTATCAGGCTAATTGAACTCTTAAGGTTCACTTAAtc                                                                            <  2:666397/100‑1 (MQ=255)
                       tGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAt                                                                             >  2:450858/1‑99 (MQ=255)
                        ggTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtct                                                                           <  1:1206082/100‑1 (MQ=255)
                         gTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAAtctc                                                                          >  1:652625/1‑100 (MQ=255)
                          tGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATctct                                                                         >  1:1157309/1‑100 (MQ=255)
                            cagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGa                                                                       >  1:1323867/1‑100 (MQ=255)
                            cagcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGa                                                                       <  2:2029823/100‑1 (MQ=255)
                             tgcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACACTGTCTTACCAGGCCAATTGAACTCTTAAGGGTCACTTAATCTCTGAc                                                                      >  2:159492/2‑100 (MQ=255)
                              gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                     >  1:668226/1‑100 (MQ=255)
                              gcaACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcg                                                                     <  2:2177024/100‑1 (MQ=255)
                               caACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcgc                                                                    <  1:449091/100‑1 (MQ=255)
                                aaCATCCGCGAATTGATGAATAAGCTGAAACGGACGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGAcgcg                                                                   <  2:1241353/100‑1 (MQ=255)
                                   aTCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCAt                                                                >  1:792714/1‑100 (MQ=255)
                                     ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                              <  2:715935/100‑1 (MQ=255)
                                     ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                              >  1:1817127/1‑100 (MQ=255)
                                     ccGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATAc                                                              >  2:1093755/1‑100 (MQ=255)
                                      cgcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTCACGCTGTCTTATCAGGGCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCa                                                                 <  2:348817/96‑1 (MQ=255)
                                       gcgAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATActc                                                            >  1:1832227/1‑100 (MQ=255)
                                            ttGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGACCTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcttc                                                       >  2:237209/1‑100 (MQ=255)
                                            ttGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcctc                                                       <  2:863703/100‑1 (MQ=255)
                                            ttGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcctc                                                       <  2:398533/100‑1 (MQ=255)
                                            ttGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTctcctc                                                       <  2:796859/100‑1 (MQ=255)
                                             tgatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctcc                                                      >  2:2186021/1‑100 (MQ=255)
                                              gtgaaccttaagagttcaattggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCa                                                     >  1:152344‑M2/52‑100 (MQ=255)
                                              gatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCa                                                     >  2:2049481/1‑100 (MQ=255)
                                              gatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCa                                                     <  1:275582/100‑1 (MQ=255)
                                              gatgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTATTAAGGTTCACTTAATCTCTGACGAGCATACTCtcctcc                                                      >  2:250440/1‑99 (MQ=255)
                                                tgaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAgg                                                   >  1:1432812/1‑100 (MQ=255)
                                                 gaATAAGCTGAAACGGATGGCCTGGTGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGt                                                  <  2:475883/100‑1 (MQ=255)
                                                 gaATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGt                                                  >  2:2321709/1‑100 (MQ=255)
                                                  aaTAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGtt                                                 <  2:1717382/100‑1 (MQ=255)
                                                    tAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTACTCTCTGACGCGCATACTCACCTCCAGGTTaa                                               >  1:1964474/1‑100 (MQ=255)
                                                    tAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCtcctccgttaacc                                               <  1:238468/100‑8 (MQ=255)
                                                      aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACg                                             >  1:453589/1‑100 (MQ=255)
                                                      aGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACg                                             >  1:1836547/1‑100 (MQ=255)
                                                       gCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgg                                            >  1:143307/1‑100 (MQ=255)
                                                         gagttcaattggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggag                                          >  1:855212‑M2/41‑100 (MQ=255)
                                                          gAATCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagg                                         <  2:184294/100‑1 (MQ=255)
                                                          gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagg                                         >  2:108828/1‑100 (MQ=255)
                                                          gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagg                                         >  2:137635/1‑100 (MQ=255)
                                                          gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACgga                                           <  1:576692/98‑1 (MQ=255)
                                                          gAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATGGAACTCTTAAGGTTCACTTGATCTCTGACTCGCATACTCTCCTCCAGGTTAACggagg                                         >  2:1284134/1‑100 (MQ=255)
                                                           aaaCGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACggagga                                        <  1:2249766/100‑1 (MQ=255)
                                                              cGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGagag                                     <  2:679567/100‑1 (MQ=255)
                                                              cGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGagag                                     >  1:814704/1‑100 (MQ=255)
                                                                   ggcctgataagacagcgtcacatcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCaa                                >  2:2195973‑M2/31‑100 (MQ=255)
                                                                   GGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCaa                                <  2:2294098‑M1/100‑1 (MQ=255)
                                                                    GCCTGATGTGACGCTGTCGTCTCAGGCCAAAGCAACTCTTAAGGGTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCaa                                <  2:1372092‑M1/99‑1 (MQ=255)
                                                                     CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                              >  1:1944119‑M1/1‑100 (MQ=255)
                                                                     CCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATg                              >  1:1324250‑M1/1‑100 (MQ=255)
                                                                           gtgACGCTGTCTTATCAGGCTAATTGAACTTTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAAc                        <  1:1816227/100‑1 (MQ=255)
                                                                             gACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCg                      <  2:1832214/100‑1 (MQ=255)
                                                                                 cTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGtt                  <  2:1673960/100‑1 (MQ=255)
                                                                                     cTTATCAGGCCAATTGAACTCTTAAGGTGCACTTAATCTCTTACGCGCATACGCTCCTCCGGGTTAACGGAGGAGAGTGCAATGAAAGACCGTGTTTATg              <  2:2010762/100‑1 (MQ=255)
                                                                                       tATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaa            >  1:2265750/1‑100 (MQ=255)
                                                                                        atcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaaa           >  1:1759100‑M2/10‑100 (MQ=255)
                                                                                        atcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaaa           >  2:486977‑M2/10‑100 (MQ=255)
                                                                                        atcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaaa           >  2:849341‑M2/10‑100 (MQ=255)
                                                                                        atcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGaaa           >  2:1894011‑M2/10‑100 (MQ=255)
                                                                                         tcaggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAg          <  2:2074436‑M2/92‑1 (MQ=255)
                                                                                         tcaggccaATTGAACCCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAg          <  1:2321731‑M2/92‑1 (MQ=255)
                                                                                          caggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGt         >  2:880362‑M2/8‑100 (MQ=255)
                                                                                          caggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGt         >  1:810340‑M2/8‑100 (MQ=255)
                                                                                          caggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGt         >  2:1681647‑M2/8‑100 (MQ=255)
                                                                                          caggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGt         >  1:603878‑M2/8‑100 (MQ=255)
                                                                                           aggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGtt        >  2:2119417‑M2/7‑100 (MQ=255)
                                                                                           aGGCAAATTGAACTCTTAAGGTTCACTTAATCTCTGACGAGAATACTCTCCTCCAGGTTAACGGAGGAAAAAAAAAAAAAAAACCGTGTTTATGAAAg          <  2:1511170/98‑1 (MQ=255)
                                                                                            ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt       >  1:756926‑M2/6‑100 (MQ=255)
                                                                                            ggccaATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGttt       >  1:2248715‑M2/6‑100 (MQ=255)
                                                                                               caATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAAc    <  2:1157304‑M2/98‑1 (MQ=255)
                                                                                               caATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAAAGTGAAATGAAAAACCGTGTTTATGAAAGTTTAAc    <  2:2285883‑M2/98‑1 (MQ=255)
                                                                                                aATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACt   >  2:1122682‑M2/2‑100 (MQ=255)
                                                                                                 aTTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTa  >  1:689307/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
TTTGCAGGCGAAACGTACCCGCCTGGTGCAGCAACATCCGCGAATTGATGAATAAGCTGAAACGGATGGCCTGATGTGACGCTGTCTTATCAGGCCAATTGAACTCTTAAGGTTCACTTAATCTCTGACGCGCATACTCTCCTCCAGGTTAACGGAGGAGAGTGCAATGAAAAACCGTGTTTATGAAAGTTTAACTA  >  NC_000913/4331950‑4332146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.