New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4415961NA (NA)6 (0.070) 3/166 NT NA noncoding (4/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 4415991 NA (NA)noncoding (34/34 nt) REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences REP332 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 134 total aligned reads displayed.

GTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACC  >  NC_000913/4415893‑4416090
                                                                                                  |                                                                                                   
gtgtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCa                                                                                                    >  1:860869/1‑100 (MQ=255)
agcagcacgataactggcgcgtacaggcgatactgtctgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCTGCa                                                                                                    >  1:344535‑M1/70‑100 (MQ=255)
 tgtgtAACCGTTTACGACGGATGCGACGTTCGTTTCGATGAACTAAATGAAATATGTCAAAATTGTATCGCGCACAACGCGCTCGCGCCGCATCAGGCa                                                                                                    <  2:290119/99‑1 (MQ=255)
  gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATTTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                  <  1:1554497/100‑1 (MQ=255)
  gtgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAtt                                                                                                  >  1:1569340/1‑100 (MQ=255)
   tgtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                 >  1:776915/1‑100 (MQ=255)
   agcctgataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                 >  1:2332883‑M1/67‑100 (MQ=255)
   agcctgataactggcgcgtacaggcgataccgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTg                                                                                                 >  1:1876894‑M1/67‑100 (MQ=255)
    gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                                                >  2:1468424/1‑100 (MQ=255)
    gtAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGt                                                                                                >  2:1061932/1‑100 (MQ=255)
     tAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGtt                                                                                               >  1:103988/1‑100 (MQ=255)
       aGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCa                                                                                             >  1:212222/1‑100 (MQ=255)
        gataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTc                                                                                              >  1:1276264‑M1/62‑98 (MQ=255)
         ataactggcgcgtacaggcgatactgtatgcatgagtgtcatctacagcaaatgaacaatGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAtt                                                                                           >  1:2012354‑M1/61‑100 (MQ=255)
          gTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCAttt                                                                                          <  2:982307/100‑1 (MQ=255)
           tataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTg                                                                                         <  1:841007/100‑1 (MQ=255)
            ataCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGc                                                                                        <  1:1908951/100‑1 (MQ=255)
             taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                       >  2:189856/1‑100 (MQ=255)
             taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                       >  2:1563854/1‑100 (MQ=255)
             taCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCt                                                                                       <  1:1834762/100‑1 (MQ=255)
              aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                                                      <  2:1091519/100‑1 (MQ=255)
              aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                                                      <  1:1412970/100‑1 (MQ=255)
              aCGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTg                                                                                      <  2:1328/100‑1 (MQ=255)
                gACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTa                                                                                    >  1:925583/1‑100 (MQ=255)
                 aCTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAg                                                                                   >  1:77221/1‑100 (MQ=255)
                  cTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGa                                                                                  >  2:1666156/1‑100 (MQ=255)
                   tGATGCGACGCTTGTTTAGATTAACTAATTGAAATATGTGAAAATTGTAGGCCGGACAAGAAGCTCGCGCCGCATCCGGCATTGTTAATTTGCTGTAGa                                                                                  >  2:1839355/1‑99 (MQ=38)
                    gATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATg                                                                                <  2:2188540/100‑1 (MQ=255)
                     aTGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGa                                                                               <  2:2157377/100‑1 (MQ=255)
                       gCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGaca                                                                             >  2:297671/1‑100 (MQ=255)
                         gACGCGGGTTACGATTAACTAACTGAGATATGCGAAAATTGTAGGCCGGACAAGGCGCTCACGCCGCATCCGGCGTTGTTCATTTGCCGTAGATg                                                                                <  2:2136263/95‑1 (MQ=25)
                          aCGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTc                                                                          <  2:1163759/100‑1 (MQ=255)
                             cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                                                       >  1:1095128/1‑100 (MQ=255)
                             cTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATg                                                                       <  1:1666167/100‑1 (MQ=255)
                              tGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGc                                                                      >  2:916866/1‑100 (MQ=255)
                                  ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                                                  <  2:697429/100‑1 (MQ=255)
                                  ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                                                  <  2:476348/100‑1 (MQ=255)
                                  ttCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATAc                                                                  <  2:2002963/100‑1 (MQ=255)
                                    cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                                <  1:1878792/100‑1 (MQ=255)
                                    cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                                >  1:2014526/1‑100 (MQ=255)
                                    cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                                <  2:1800028/100‑1 (MQ=255)
                                    cGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAg                                                                >  2:1345535/1‑100 (MQ=255)
                                     gATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGt                                                               >  1:1764783/1‑100 (MQ=255)
                                      aTTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTa                                                              <  1:365510/100‑1 (MQ=255)
                                         aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATc                                                            >  2:610761/1‑99 (MQ=255)
                                         aaCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCg                                                           <  1:916871/100‑1 (MQ=255)
                                          aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGc                                                          >  1:1284659/1‑100 (MQ=255)
                                          aCTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCAATGTTCATTTGATGTAGATGACACCCATGCATACAGTAt                                                             >  2:767460/1‑97 (MQ=255)
                                           cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                         <  2:212221/100‑1 (MQ=255)
                                           cTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGcc                                                         <  2:938024/100‑1 (MQ=255)
                                            tAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCt                                                        >  2:1034637/1‑100 (MQ=255)
                                             aaaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTg                                                       <  1:1103273/100‑1 (MQ=255)
                                              aaTGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGt                                                      >  1:1375453/1‑100 (MQ=255)
                                                 gAAATATGTGAAAATTGTAGGCCGCACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcg                                                   <  2:139980/100‑1 (MQ=255)
                                                   aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                                                 <  2:776912/100‑1 (MQ=255)
                                                   aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                                                 <  1:1307386/100‑1 (MQ=255)
                                                   aaTATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                                                 <  2:925578/100‑1 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCGACATCCCGCTTTTTGCATCTGCGGTAGATGACACACATGCATACAGTGTCGCCTGTACGCGTCAg                                             >  2:649217/1‑100 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                             >  2:46060/1‑100 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                             <  2:860865/100‑1 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                             <  1:1727294/100‑1 (MQ=255)
                                                       tgtgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                             >  1:1962341/1‑100 (MQ=255)
                                                         tgAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGtt                                           >  2:1914884/1‑100 (MQ=255)
                                                         tgAAAATAGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTTCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAg                                             <  2:2086563/98‑1 (MQ=255)
                                                          gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATGCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTAcgcg                                                 >  2:1803672/1‑93 (MQ=255)
                                                          gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                          >  2:80776/1‑100 (MQ=255)
                                                          gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                          >  2:771704/1‑100 (MQ=255)
                                                          gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                          >  2:1867135/1‑100 (MQ=255)
                                                          gAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTa                                          <  1:1379273/100‑1 (MQ=255)
                                                                   aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacaca                                 <  1:610048‑M2/100‑69 (MQ=255)
                                                                   aGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgc                                 <  1:231150/100‑1 (MQ=255)
                                                                    ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCTCCAGTTATCAGgctgct                                >  1:48027/1‑100 (MQ=255)
                                                                    ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                                >  1:1367131/1‑100 (MQ=255)
                                                                    ggCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGgctgct                                >  1:2056645/1‑100 (MQ=255)
                                                                     gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca                               <  1:1423878‑M2/100‑71 (MQ=255)
                                                                     gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca                               <  1:412139‑M2/100‑71 (MQ=255)
                                                                     gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca                               <  2:974374‑M2/100‑71 (MQ=255)
                                                                     gCCGGACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacaca                               <  2:418382‑M2/100‑71 (MQ=255)
                                                                       CGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGt                             <  1:736041‑M1/100‑1 (MQ=255)
                                                                        ggACAAGGCGCTCGCGCCGCATCCGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacac                            <  1:475875‑M2/100‑74 (MQ=255)
                                                                        GGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTc                            >  2:825516‑M1/1‑100 (MQ=255)
                                                                          ACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCt                           >  1:942035‑M1/1‑99 (MQ=255)
                                                                             aGGCGCTCGCGCGGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCg                        >  2:2043141/1‑99 (MQ=255)
                                                                             aGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGt                       <  1:653276/100‑1 (MQ=255)
                                                                               gcgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTAc                     >  1:778891/1‑100 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACa                    >  1:2310690/1‑100 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACa                    >  1:948785/1‑100 (MQ=255)
                                                                                cgcTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACa                    <  2:2014511/100‑1 (MQ=255)
                                                                                  cTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATg                  <  1:2142924/100‑1 (MQ=255)
                                                                                   tCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATgg                 <  1:881712/100‑1 (MQ=255)
                                                                                    cgcgCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGt                >  1:2228852/1‑100 (MQ=255)
                                                                                    cgcgCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGt                <  2:1051182/100‑1 (MQ=255)
                                                                                      cgccgcATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGtaa              <  1:1869954/100‑1 (MQ=255)
                                                                                            aTCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGc        >  2:2251118/1‑100 (MQ=255)
                                                                                            aTCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGc        <  1:1563864/100‑1 (MQ=255)
                                                                                              ccGGCctccaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaat      >  2:1621492‑M2/1‑5 (MQ=255)
                                                                                               cGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaata     >  1:1353041‑M2/1‑4 (MQ=255)
                                                                                               cGGCctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaata     >  1:38113‑M2/1‑4 (MQ=255)
                                                                                                  cctacaattttcacatatttcatttagttaatcgaaaccagcgtcgcatcagtcgtatacgcttacacacacactccccccgtcgcccgcagcaataaat  <  2:2113684‑M2/100‑100 (MQ=255)
                                                                                                  cctacaattttcacatatttcatttacttaatcgaaaccagcgccgcatcagtcgtatactcttacacacacactccccccgtcgcccgcagcaataaat  >  2:1617199‑M2/1‑1 (MQ=255)
                                                                                                  |                                                                                                   
GTGTGTAAGCGTATACGACTGATGCGACGCTGGTTTCGATTAACTAAATGAAATATGTGAAAATTGTAGGCCGGACAAGGCGCTCGCGCCGCATCCGGCATTGTTCATTTGCTGTAGATGACACTCATGCATACAGTATCGCCTGTACGCGCCAGTTATCAGGCTGCTGGTCTTCGTACATGGTAATAATGCGGTACC  >  NC_000913/4415893‑4416090

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.