New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4606558 =NA (NA)5 (0.060) 4/164 NT NA noncoding (1/92 nt) REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4606590 = NA (NA)noncoding (33/92 nt) REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 118 total aligned reads displayed.

TGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGC  >  NC_000913/4606491‑4606688
                                                                                                   |                                                                                                  
tgtAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGcc                                                                                                    >  2:869844/1‑100 (MQ=255)
tgtAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGcc                                                                                                    >  2:1749956/1‑100 (MQ=255)
ataccgtgtcggatgcggcgtgaacgccttatccgacctacaaaacctgcacgttagcccttcgtagGCCAGATGCGACGCTGGCGCGTCTTATCTGGcc                                                                                                    >  2:2235857‑M1/68‑100 (MQ=255)
 taccgtgtcggatgcggcgtgaacgccttatccgacctacaaaacctgcacgttagcccttcgtagGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCt                                                                                                   >  1:1654144‑M1/67‑100 (MQ=255)
 gtAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCt                                                                                                   >  2:2317378/1‑100 (MQ=255)
   aaTTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTAc                                                                                                 >  1:477743/1‑100 (MQ=255)
   aaTTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTAc                                                                                                 <  2:79424/100‑1 (MQ=255)
    aTTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACg                                                                                                <  1:82088/100‑1 (MQ=255)
       gCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAg                                                                                             >  1:1827921/1‑100 (MQ=255)
        cTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAgg                                                                                            >  2:871924/1‑100 (MQ=255)
        cTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAgg                                                                                            >  1:1571795/1‑100 (MQ=255)
        cTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAgg                                                                                            >  2:1542125/1‑100 (MQ=255)
         tGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAggg                                                                                           <  2:287699/100‑1 (MQ=255)
         tGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAggg                                                                                           >  1:1704634/1‑100 (MQ=255)
          ngAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAAGGc                                                                                          >  2:583792/2‑100 (MQ=255)
          ggAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGc                                                                                          >  1:2229891/1‑100 (MQ=255)
            aaaaaTGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTa                                                                                        >  2:762419/1‑100 (MQ=255)
             aaaaTGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTaa                                                                                       >  1:635747/1‑100 (MQ=255)
             aaaaTGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATACGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTaa                                                                                       >  2:95991/1‑100 (MQ=255)
               aaTGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACg                                                                                     <  1:709302/100‑1 (MQ=255)
                  gTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGc                                                                                  <  2:1673064/100‑1 (MQ=255)
                    ccATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAg                                                                                <  1:90987/100‑1 (MQ=255)
                       tCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGtt                                                                             >  1:2122854/1‑100 (MQ=255)
                        cAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGttt                                                                            >  2:1001740/1‑100 (MQ=255)
                        cAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGAGGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGAGCTAACGTGCAGGttt                                                                            >  2:1373079/1‑100 (MQ=255)
                         aGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGtttt                                                                           >  1:84614/1‑100 (MQ=255)
                         aGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGtttt                                                                           >  1:343989/1‑100 (MQ=255)
                           gAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGt                                                                         <  1:1107499/100‑1 (MQ=255)
                            aaaCTTGCGTGCAGGTTTGGTATGAATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCGAACGTGCAGGTGTTGTa                                                                        <  2:306635/100‑1 (MQ=25)
                            aaaCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTa                                                                        <  1:1622855/100‑1 (MQ=255)
                            aaaCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTa                                                                        >  2:1968731/1‑100 (MQ=255)
                            aaaCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTa                                                                        <  2:270943/100‑1 (MQ=255)
                             aaCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAg                                                                       <  1:2224981/100‑1 (MQ=255)
                              aCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAgg                                                                      <  2:1467785/100‑1 (MQ=255)
                              aCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAgg                                                                      <  2:1467650/100‑1 (MQ=255)
                              aCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAgg                                                                      <  2:2285927/100‑1 (MQ=255)
                               cTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAgg                                                                      >  2:144667/1‑99 (MQ=255)
                               cTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGt                                                                     >  2:1040410/1‑100 (MQ=255)
                                 gatctGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCg                                                                   <  1:512358/96‑1 (MQ=255)
                                  gCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCgg                                                                  >  1:760272/1‑100 (MQ=255)
                                    gTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGAt                                                                <  1:418869/100‑1 (MQ=255)
                                    gTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGAt                                                                >  2:786607/1‑100 (MQ=255)
                                     tGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATa                                                               <  1:1044261/100‑1 (MQ=255)
                                     tGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATa                                                               >  1:1347621/1‑100 (MQ=255)
                                      gCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCgagatc                                                              >  2:512355/1‑95 (MQ=255)
                                      gCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATaa                                                              >  2:1216117/1‑100 (MQ=255)
                                        aGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAgg                                                            <  1:2258229/100‑1 (MQ=255)
                                        aGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAgg                                                            <  1:656932/100‑1 (MQ=255)
                                         ggTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGc                                                           >  2:1774174/1‑100 (MQ=255)
                                         ggTTTGGCATGAATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAgg                                                            >  2:1232197/1‑99 (MQ=255)
                                          gTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCg                                                          <  1:316581/100‑1 (MQ=255)
                                             tGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTc                                                       <  2:589836/100‑1 (MQ=255)
                                              ggTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCa                                                      >  1:1913788/1‑100 (MQ=255)
                                              ggTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCa                                                      >  1:936730/1‑100 (MQ=255)
                                                tATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcg                                                    >  1:1538295/1‑100 (MQ=255)
                                                tATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcg                                                    <  1:1751815/100‑1 (MQ=255)
                                                 atgcatgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgc                                                   >  1:2045059/1‑100 (MQ=255)
                                                  tgcatgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgcc                                                  >  1:1646487/1‑100 (MQ=255)
                                                   gcatgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgccg                                                 <  1:491102/100‑1 (MQ=255)
                                                    catgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgccgc                                                >  2:1928465/1‑100 (MQ=255)
                                                    catgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgccgc                                                >  1:1341687/1‑100 (MQ=255)
                                                    catgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgccgc                                                >  2:1251110/1‑100 (MQ=255)
                                                    catgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgccgc                                                >  1:954304/1‑100 (MQ=255)
                                                    catgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCGTATCTGGCCGACGAAGGGCTAACGTGCAGGGTTTGTAGGTCGGATAAGGCGTTCAcggcg                                                 >  2:1881609/1‑99 (MQ=25)
                                                      tgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCAt                                              >  2:1213873/1‑100 (MQ=255)
                                                      tgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCAt                                              >  1:124381/1‑100 (MQ=255)
                                                      tgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCAt                                              >  1:1258252/1‑100 (MQ=255)
                                                       gcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATc                                             <  2:1159570/100‑1 (MQ=255)
                                                        cGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATcc                                            >  1:1092624/1‑100 (MQ=255)
                                                        cGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATcc                                            <  1:423202/100‑1 (MQ=255)
                                                         gggggCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCg                                           <  1:1093361/100‑1 (MQ=255)
                                                              cagatgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACg                                      >  1:2050855/1‑100 (MQ=255)
                                                               ngatgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACgg                                     >  2:609541/2‑100 (MQ=255)
                                                               agatgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACgg                                     <  2:1001240/100‑1 (MQ=255)
                                                                 aggccagataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTa                                   >  1:1654144‑M2/35‑100 (MQ=255)
                                                                   GCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTAtt                                 >  1:1428118‑M1/1‑100 (MQ=255)
                                                                      agataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCgg                              >  1:2056724‑M2/30‑100 (MQ=255)
                                                                      agataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCgg                              >  1:255244‑M2/30‑100 (MQ=255)
                                                                      AGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCgg                              <  1:1419377‑M1/100‑1 (MQ=255)
                                                                      AGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCgg                              >  2:869846‑M1/1‑100 (MQ=255)
                                                                       GATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGc                             >  2:1692688‑M1/1‑100 (MQ=255)
                                                                        cTGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCg                            >  1:66624‑M1/2‑100 (MQ=255)
                                                                          gcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgag                          <  2:1773198/100‑1 (MQ=255)
                                                                          gcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgag                          >  2:66624/1‑100 (MQ=255)
                                                                           cGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgaga                         >  1:1828062/1‑100 (MQ=255)
                                                                            gACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGAt                        <  2:256911/100‑1 (MQ=255)
                                                                                  ggCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTaa                  >  1:18362/1‑100 (MQ=255)
                                                                                   gcgcGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAc                 >  2:1854254/1‑100 (MQ=255)
                                                                                    cgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAcc                >  1:464668/1‑100 (MQ=255)
                                                                                    cgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAcc                <  1:657500/100‑1 (MQ=255)
                                                                                         cTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttct           >  1:1680851/1‑100 (MQ=255)
                                                                                         cTTATCTGGCCTACAAAGGGCTAACGTACAGGTTTTGTAGGTCGGATAAGGCGTTCACACCACATCCAACACGGTATTCGACGAGATAATTAAcc                >  2:63450/1‑95 (MQ=37)
                                                                                            atctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttcttc         >  1:751164‑M2/8‑99 (MQ=255)
                                                                                              ctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGTCGTTCACGCCTCATCCGACACAGTATTCGGCGAGATAATTAACCTTTCTTCGcc      <  1:869848‑M2/95‑1 (MQ=255)
                                                                                              ctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGcc      <  2:1220431‑M2/95‑1 (MQ=255)
                                                                                               tggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCt     >  2:805987‑M2/5‑100 (MQ=255)
                                                                                                ggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTg    >  2:2180466‑M2/4‑100 (MQ=255)
                                                                                                 gcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTgg   >  2:77503‑M2/3‑100 (MQ=255)
                                                                                                  cCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGc  >  1:2121765‑M2/2‑100 (MQ=255)
                                                                                                  cCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGc  >  2:871980‑M2/2‑100 (MQ=255)
                                                                                                   |                                                                                                  
TGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGC  >  NC_000913/4606491‑4606688

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.