New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 462720479 (0.910)3 (0.040) 3/162 NT 3.7% coding (1293/1383 nt) radA DNA repair protein
?NC_000913 = 4627223 83 (1.050)coding (1312/1383 nt) radA DNA repair protein
Rejected: Frequency below cutoff threshold.

Only 100 of 101 total aligned reads displayed.

GATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATGTCGTC  >  NC_000913/4627126‑4627322
                                                                                                 |                                                                                                   
gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                                   <  1:565018‑M2/100‑3 (MQ=255)
gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                                   <  1:1464595‑M2/100‑3 (MQ=255)
 aTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgc                                                                                                  <  1:708333‑M2/100‑4 (MQ=255)
  tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgcc                                                                                                 <  2:1901249‑M2/100‑5 (MQ=255)
    cGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgg                                                                                               <  1:1359936‑M2/100‑7 (MQ=255)
      cccGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccggaa                                                                                             <  1:1619573‑M2/100‑9 (MQ=255)
        cGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAgg                                                                                           <  2:294029/100‑1 (MQ=255)
         ggTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAggg                                                                                          >  2:428853/1‑100 (MQ=255)
         ggTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAggg                                                                                          <  2:534222/100‑1 (MQ=255)
           tGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGAt                                                                                        <  1:783768/100‑1 (MQ=255)
              ccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGCAGGGATGCa                                                                                     >  1:2224833/1‑100 (MQ=255)
               cAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCa                                                                                     <  2:385849/99‑1 (MQ=255)
               cAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAg                                                                                    >  2:1481638/1‑100 (MQ=255)
                   ggTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGACGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAg                                                                                    <  2:2165980/96‑1 (MQ=255)
                     tCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAttttt                                                                              <  2:292042/100‑1 (MQ=255)
                      cAGGAACGAATCTCTGAAGCGGCGAAACCCGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                             <  1:692144/100‑1 (MQ=255)
                      cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                             >  2:262874/1‑100 (MQ=255)
                      cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                             >  1:1718161/1‑100 (MQ=255)
                      cAGGAACGAAGCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                             <  2:478437/100‑1 (MQ=255)
                       aGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTgg                                                                            <  1:911487/100‑1 (MQ=255)
                       aGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                             <  1:192484/99‑1 (MQ=255)
                        ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGGAGGGATGCAGATTTTTGGc                                                                           >  2:211083/1‑100 (MQ=255)
                        ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                           >  1:501188/1‑100 (MQ=255)
                        ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                           >  1:1530705/1‑100 (MQ=255)
                        ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                           >  1:873709/1‑100 (MQ=255)
                        ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                           >  1:300916/1‑100 (MQ=255)
                          aaCGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGt                                                                         >  1:1272942/1‑100 (MQ=255)
                            cGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTa                                                                       <  1:609410/100‑1 (MQ=255)
                             gAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                                          >  2:2079879/1‑96 (MQ=255)
                             gAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGATAACGTGCCGAAAAAAGCGCCGGAAAAAATAAAAATTTTTCGCGTTa                                                                       <  2:2273737/99‑1 (MQ=255)
                              aaTCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaa                                                                     >  1:1605551/1‑100 (MQ=255)
                                   ctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAct                                                                >  2:1388882/1‑100 (MQ=255)
                                   ctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAct                                                                >  2:1583340/1‑100 (MQ=255)
                                          ggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAc                                                         >  2:175487/1‑100 (MQ=255)
                                           gcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCCGATTTTTGGCGTTAAAAAACTCTCCGAcg                                                        >  1:2289880/1‑100 (MQ=255)
                                            cgAAACACGTTTTTCGCCGGGCGATTGTGCCGGCGGATAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgc                                                       <  2:307632/100‑1 (MQ=255)
                                            cgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgc                                                       <  2:1088234/100‑1 (MQ=255)
                                             gAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgcg                                                      >  1:913829/1‑100 (MQ=255)
                                             gAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgcg                                                      >  2:98914/1‑100 (MQ=255)
                                               aaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCt                                                    >  2:870187/1‑100 (MQ=255)
                                               aaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCt                                                    >  2:328041/1‑100 (MQ=255)
                                               aaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCt                                                    <  1:1691356/100‑1 (MQ=255)
                                                acacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCtt                                                   >  1:2109773/1‑100 (MQ=255)
                                                acacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCtt                                                   >  2:1714943/1‑100 (MQ=255)
                                                  acGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAg                                                 <  2:308065/100‑1 (MQ=255)
                                                    ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                                               <  1:669856/100‑1 (MQ=255)
                                                    ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                                               <  2:300914/100‑1 (MQ=255)
                                                      ttttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgtg                                             <  1:1789299/100‑1 (MQ=255)
                                                      ttttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCG‑AAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgtgt                                            <  1:837461/100‑1 (MQ=255)
                                                        ttCGCCGCGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGtt                                           <  2:1265356/100‑1 (MQ=255)
                                                         tCGGCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAGCTCTCCGACGCGCTTAGCGTGTTc                                          <  1:2241686/100‑1 (MQ=255)
                                                          cGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                                         <  1:1466714/100‑1 (MQ=255)
                                                          cGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                                         >  1:1629615/1‑100 (MQ=255)
                                                          cGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                                         <  1:800234/100‑1 (MQ=255)
                                                            ccGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgac                                       >  1:1883199/1‑100 (MQ=255)
                                                            ccGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgac                                       >  2:2206715/1‑100 (MQ=255)
                                                             cGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                                      <  1:1094064/100‑1 (MQ=255)
                                                               ggCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacgan                                    <  2:1511609/100‑2 (MQ=255)
                                                               ggCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCgacgac                                    <  1:1806005/100‑1 (MQ=255)
                                                               ggCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCgacgac                                    <  1:1744483/100‑1 (MQ=255)
                                                               ggCGATTGGTCCGGCGGCTAACGTGCGGAAAAAAGCGCCGGAAGGGAGGCAGATTTTTGGCGTAAAAAAACTCTCCGACGCGCTTAGCGTGTTCgacgac                                    <  2:1150190/100‑1 (MQ=255)
                                                                 cGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACtt                                  <  1:1106522/100‑1 (MQ=255)
                                                                    ttGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtata                               <  1:56073/100‑1 (MQ=255)
                                                                      gTTCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgg                             <  2:1874548‑M2/100‑73 (MQ=255)
                                                                      gTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAAt                             >  1:625634/1‑100 (MQ=255)
                                                                       ttCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATg                            <  2:2057816/100‑1 (MQ=255)
                                                                        tCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggc                           <  2:82580‑M2/100‑75 (MQ=255)
                                                                        tCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAACCTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga                           <  1:883015/100‑1 (MQ=255)
                                                                        tCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga                           <  1:1583351/100‑1 (MQ=255)
                                                                        tCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga                           <  1:883021/100‑1 (MQ=255)
                                                                        tCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga                           <  2:1961211/100‑1 (MQ=255)
                                                                         ccGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcggaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccgggcg                          <  2:100040‑M2/100‑76 (MQ=255)
                                                                         ccGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgag                          >  1:1523627/1‑100 (MQ=255)
                                                                         ccGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgag                          >  2:199738/1‑100 (MQ=255)
                                                                         ccGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgag                          <  1:472610/100‑1 (MQ=255)
                                                                          cggcggCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgaga                         <  1:50569/100‑1 (MQ=255)
                                                                           ggcggcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGat                        <  1:428856/100‑1 (MQ=255)
                                                                              ggcTAACGTGCCGAAACAAGCGGCGGAAGGGATGTAGGCGTTTGGCGGTAGAGAGGTCTCCGGCGCGCTTAGCGTGTTCGAGGATTTAGAGTGAGatgtn                     <  2:1480283/100‑4 (MQ=255)
                                                                              ggcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTCAAAATACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGatatn                     <  2:1480263/100‑2 (MQ=255)
                                                                                cTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACg                   <  1:323050/100‑1 (MQ=255)
                                                                                  aaCGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACgga                 <  2:423025/100‑1 (MQ=255)
                                                                                    cGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggagg               >  2:1738514/1‑100 (MQ=255)
                                                                                    cGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggagg               <  2:201618/100‑1 (MQ=255)
                                                                                        ccGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGgaga           >  1:885599/1‑100 (MQ=255)
                                                                                        ccGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGCTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGgaga           >  1:1740507/1‑100 (MQ=255)
                                                                                         cGAGAAAAGCGCCGGAAGGGATGCAGATTTTTGGTTTTAAAAAACTCTCCGACGCGCTTAGCCTGTTCGACGACTTATAATGAGAGATACGGAGGgaga           <  1:1011032/99‑1 (MQ=255)
                                                                                         cGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGat          <  2:1785951/100‑1 (MQ=255)
                                                                                         cGAAAAAAGCGCCGGAAGGGATGCAGATTATTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGat          >  2:1678965/1‑100 (MQ=255)
                                                                                          gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata         <  2:1524253/100‑1 (MQ=255)
                                                                                          gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata         >  2:1516821/1‑100 (MQ=255)
                                                                                          gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata         >  1:211227/1‑100 (MQ=255)
                                                                                          gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata         <  2:565015/100‑1 (MQ=255)
                                                                                          gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata         <  1:441913/100‑1 (MQ=255)
                                                                                            aaaaaGCGCCGGAAGTGATGCAGATTTTTGGCATTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATg       <  1:911897/100‑1 (MQ=255)
                                                                                            aaaaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATg       >  1:1198713/1‑100 (MQ=255)
                                                                                             aaaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgt      <  2:1299703/100‑1 (MQ=255)
                                                                                              aaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtc     >  2:1842642/1‑100 (MQ=255)
                                                                                               aaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtcg    >  1:1955835/1‑100 (MQ=255)
                                                                                                aGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtcgt   >  1:1984869/1‑100 (MQ=255)
                                                                                                 gcgcCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtcgtc  >  1:992122/1‑100 (MQ=255)
                                                                                                 |                                                                                                   
GATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATGTCGTC  >  NC_000913/4627126‑4627322

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.