New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 72136 =NA (NA)6 (0.070) 6/164 NT NA noncoding (1/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 72169 = NA (NA)noncoding (34/85 nt) REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences REP7 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 136 total aligned reads displayed.

GATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTA  >  NC_000913/72070‑72268
                                                                                                   |                                                                                                   
ggttagtatgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                     >  1:14221‑M1/67‑100 (MQ=255)
gATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGcc                                                                                                     <  1:552891/100‑1 (MQ=255)
   gCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                                                  >  2:1552786/1‑100 (MQ=255)
   gCCGGTGTATATCGATATTTCGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTAc                                                                                                  <  2:726937/100‑1 (MQ=255)
       atgcactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACaaaa                                                                                              >  1:1535246‑M1/60‑100 (MQ=255)
        tgtATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAAc                                                                                             <  2:226721/100‑1 (MQ=255)
          tataTCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                                                           >  1:2251204/1‑100 (MQ=255)
          cactgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgttttgtagGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGc                                                                                           >  1:2169779‑M1/57‑100 (MQ=255)
           atatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCa                                                                                          >  1:2053973/1‑100 (MQ=255)
           atatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCa                                                                                          >  2:1946411/1‑100 (MQ=255)
            tatCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCAc                                                                                         <  2:2134079/100‑1 (MQ=255)
             atCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACt                                                                                        >  2:1552836/1‑100 (MQ=255)
             atCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACt                                                                                        >  2:705481/1‑100 (MQ=255)
             atCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACt                                                                                        >  2:1799593/1‑100 (MQ=255)
               ctgtcggatgcggcgtgaacgccttatccgacctacgggtagtgcgggttgCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAcc                                                                                     >  2:90322‑M1/52‑100 (MQ=255)
                gATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAcc                                                                                     >  1:1285957/1‑100 (MQ=255)
                gATATGTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAcc                                                                                     <  1:2106963/100‑1 (MQ=255)
                 atatTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTAccc                                                                                    <  1:1030162/100‑1 (MQ=255)
                    ttttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTa                                                                                 <  1:1083620/100‑1 (MQ=255)
                    ttttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTa                                                                                 >  2:2023565/1‑100 (MQ=255)
                     tttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAg                                                                                >  1:1760087/1‑100 (MQ=255)
                      ttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAgg                                                                               <  2:2081914/100‑1 (MQ=255)
                      ttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAgg                                                                               <  2:1619682/100‑1 (MQ=255)
                      ttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAgg                                                                               <  2:65445/100‑1 (MQ=255)
                      ttGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAgg                                                                               <  2:1619710/100‑1 (MQ=255)
                         cGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCg                                                                            <  2:1728026/100‑1 (MQ=255)
                          gTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCgg                                                                           <  1:536542/100‑1 (MQ=255)
                            aaaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCggct                                                                         >  2:385587/1‑98 (MQ=255)
                            aaaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGAt                                                                         <  2:885323/100‑1 (MQ=255)
                             aaGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATa                                                                        >  1:1970621/1‑100 (MQ=255)
                               gTGGTTGGGGTTTAGGAGAGAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAg                                                                      <  2:459149/100‑1 (MQ=255)
                                tGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAgg                                                                     <  2:504172/100‑1 (MQ=255)
                                tGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAgg                                                                     <  2:1046084/100‑1 (MQ=255)
                                 ggTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGc                                                                    >  2:2072511/1‑100 (MQ=255)
                                 ggTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGc                                                                    <  1:386707/100‑1 (MQ=255)
                                  gTTGGGGTTTAGGAGATAGTCTTTTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCg                                                                   <  2:629166/100‑1 (MQ=255)
                                  gTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTGCCCGTAGGTCGGATAAGGCg                                                                   >  1:197456/1‑100 (MQ=255)
                                  gTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCg                                                                   <  2:290660/100‑1 (MQ=255)
                                     ggggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTc                                                                >  2:1818186/1‑100 (MQ=255)
                                      gggTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCa                                                               >  2:786294/1‑100 (MQ=255)
                                        gTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg                                                             <  1:469201/100‑1 (MQ=255)
                                        gTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg                                                             >  1:848036/1‑100 (MQ=255)
                                        gTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg                                                             >  1:1683393/1‑100 (MQ=255)
                                         tttAGGAGATATTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTTTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcg                                                             >  2:345053/1‑99 (MQ=255)
                                         tttAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgc                                                            <  2:48536/100‑1 (MQ=255)
                                          ttAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCAcgcc                                                           >  2:437611/1‑100 (MQ=255)
                                             ggAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCa                                                        >  1:1112270/1‑100 (MQ=255)
                                                gaTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATGAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATc                                                      >  1:1458886/1‑99 (MQ=255)
                                                gaTAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATcc                                                     >  1:2291836/1‑100 (MQ=255)
                                                  tAGTCTTGTGCGGGTTGCCTGATTCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa                                                   >  2:23686/1‑100 (MQ=255)
                                                  tAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa                                                   >  1:835839/1‑100 (MQ=255)
                                                  tAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa                                                   >  2:883895/1‑100 (MQ=255)
                                                    gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa                                                 >  2:624217/1‑100 (MQ=255)
                                                    gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa                                                 >  2:214267/1‑100 (MQ=255)
                                                    gTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACa                                                 >  1:1749400/1‑100 (MQ=255)
                                                     tCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAg                                                >  2:2278722/1‑100 (MQ=255)
                                                      cTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGt                                               >  2:2351442/1‑100 (MQ=255)
                                                      cTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCGTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGt                                               >  2:950676/1‑100 (MQ=255)
                                                       gcgttttgtaggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTg                                              >  1:2169779‑M2/45‑100 (MQ=255)
                                                        tgtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGc                                             <  2:1736438/100‑1 (MQ=255)
                                                         gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATGCGGCGTGAACGCCTTATCCGAcctacgg                                            <  1:2014344/100‑7 (MQ=21)
                                                         gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATGCGGCGTGAACGCCTTATCCGAcctacgg                                            <  1:1678464/100‑7 (MQ=21)
                                                         gtgCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCa                                            <  1:2329305/100‑1 (MQ=255)
                                                          ttttgtaggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCAt                                           >  1:1535246‑M2/42‑100 (MQ=255)
                                                           gCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATa                                          >  2:101910/1‑100 (MQ=255)
                                                              ggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTa                                       >  1:1331904/1‑100 (MQ=255)
                                                              ggTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTa                                       <  2:2229652/100‑1 (MQ=255)
                                                                 ggcctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAAcc                                    >  1:14221‑M2/35‑100 (MQ=255)
                                                                   cctgataagacgcggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCg                                  >  1:2143520‑M2/33‑100 (MQ=255)
                                                                    CTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGt                                 <  1:127306‑M1/100‑1 (MQ=255)
                                                                         gCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcc                            <  2:945146/100‑1 (MQ=255)
                                                                          cGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGTCGCTCACGCAGCATCCGACAGTGCATACTAACCCGTAATccc                           >  2:1649625/1‑100 (MQ=255)
                                                                           gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                          <  2:1233071/100‑1 (MQ=255)
                                                                           gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                          <  2:858289/100‑1 (MQ=255)
                                                                           gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATcccc                          >  2:2315612/1‑100 (MQ=255)
                                                                           gACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCATAATcccc                          >  2:1313968/1‑100 (MQ=255)
                                                                               cggcaagcgtcgcatcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATa                      >  1:318769‑M2/21‑100 (MQ=255)
                                                                                  gCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTg                   >  2:276138/1‑100 (MQ=255)
                                                                                   ccGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGc                  >  1:1327413/1‑100 (MQ=255)
                                                                                   ccGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGc                  >  2:289904/1‑100 (MQ=255)
                                                                                      cgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGa               <  1:370870/100‑1 (MQ=255)
                                                                                      cgTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGa               <  2:1744562/100‑1 (MQ=255)
                                                                                      cgTCTTATCAGGCCTACAAAACGCAATACCCGTAGGTCGGATAAGGCGTTCACGACGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGa               <  1:970658/100‑1 (MQ=255)
                                                                                       gTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGaa              >  2:2225861/1‑100 (MQ=255)
                                                                                        tCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAg             <  1:2327391/100‑1 (MQ=255)
                                                                                        tCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAg             <  1:636987/100‑1 (MQ=255)
                                                                                        tCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAg             >  1:1682192/1‑100 (MQ=255)
                                                                                         cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc            >  1:2161687/1‑100 (MQ=255)
                                                                                         cTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGc            >  2:212373/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc          >  2:2207422/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCAc          <  1:437614/100‑1 (MQ=255)
                                                                                             tcaggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTc        <  1:184911‑M2/94‑1 (MQ=255)
                                                                                              caggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACt         >  2:1918687‑M2/6‑98 (MQ=255)
                                                                                               aggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGc      >  2:1940129‑M2/5‑100 (MQ=255)
                                                                                               aggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGc      <  1:1035255‑M2/96‑1 (MQ=255)
                                                                                                ggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGcc     >  2:1519292‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCACCCCTCGTGCCAAAGCCCtcgga     >  1:1018661‑M2/4‑98 (MQ=255)
                                                                                                  cCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt   >  1:2036730‑M2/2‑100 (MQ=255)
                                                                                                  cCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCtt   >  2:811698‑M2/2‑100 (MQ=255)
                                                                                                   cTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTa  >  1:687707/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
GATGCCGGTGTATATCGATATTTTGCGTAAAGTGGTTGGGGTTTAGGAGATAGTCTTGTGCGGGTTGCCTGATGCGACGCTTGCCGCGTCTTATCAGGCCTACAAAACGCACTACCCGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACAGTGCATACTAACCCGTAATCCCCAATAGTGCCGAAGCACTCGCCTTA  >  NC_000913/72070‑72268

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.