New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 462789265 (0.750)4 (0.050) 3/164 NT 5.9% coding (578/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
?NC_000913 = 4627903 68 (0.850)coding (589/1233 nt) nadR trifunctional protein: nicotinamide mononucleotide adenylyltransferase, ribosylnicotinamide kinase, transcriptional repressor
Rejected: Frequency below cutoff threshold.

TTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGTTT  >  NC_000913/4627804‑4628001
                                                                                                   |                                                                                                  
tttATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTgg                                                                                                    >  2:875360/1‑100 (MQ=255)
  tatgcttgtaaaaGGTATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTgg                                                                                                    <  2:2230280/89‑1 (MQ=255)
  tATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtc                                                                                                  >  1:2242063‑M2/1‑98 (MQ=255)
    tGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcga                                                                                                >  2:433551‑M2/1‑96 (MQ=255)
    tGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcga                                                                                                <  1:1742725‑M2/100‑5 (MQ=255)
     ggCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgat                                                                                               <  1:1641945‑M2/100‑6 (MQ=255)
      gCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                              <  1:948456‑M2/100‑7 (MQ=255)
      gCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                              <  2:799166‑M2/100‑7 (MQ=255)
       cTGTAAAAGGGACCCAGACGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                             >  2:1895187‑M2/1‑93 (MQ=255)
       cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGCACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                              <  2:2309437‑M2/99‑7 (MQ=255)
       cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                             >  1:1800656‑M2/1‑93 (MQ=255)
       cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                             >  1:2196547‑M2/1‑93 (MQ=255)
       cTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatcc                                                                                             <  1:2133321‑M2/100‑8 (MQ=255)
        tGAAAAAGGGATCCAGCCGGACCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGtcgatc                                                                                              >  2:2183123‑M2/1‑92 (MQ=255)
         gtagatcagATCCGGCTGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGa                                                                                           >  2:1180926/9‑100 (MQ=255)
           aaaaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGaaa                                                                                         >  1:1744893/1‑100 (MQ=255)
             aaGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACg                                                                                       <  1:1204029/100‑1 (MQ=255)
              aGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGt                                                                                      <  2:1526010/100‑1 (MQ=255)
               gggATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTa                                                                                     <  1:1420922/100‑1 (MQ=255)
               gggATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTa                                                                                     >  1:1941232/1‑100 (MQ=255)
                 gATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTAcc                                                                                   >  2:1464482/1‑100 (MQ=255)
                 gATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTAcc                                                                                   <  1:1040800/100‑1 (MQ=255)
                     cAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTa                                                                               >  1:2186615/1‑100 (MQ=255)
                         cGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAg                                                                           <  1:2134513/100‑1 (MQ=255)
                          ggATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGt                                                                          <  2:1616261/100‑1 (MQ=255)
                          ggATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGt                                                                          >  1:240121/1‑100 (MQ=255)
                           gatctgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTa                                                                         <  1:906609/100‑1 (MQ=255)
                              ctgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCa                                                                      >  2:1039099/1‑100 (MQ=255)
                               tgatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAg                                                                     >  2:1184961/1‑100 (MQ=255)
                               tgatctACACCTCGGAAGAAGCCGACGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAg                                                                     >  2:2291630/1‑100 (MQ=255)
                                gatctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGc                                                                    >  2:166348/1‑100 (MQ=255)
                                 atctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCg                                                                   <  2:2060287/100‑1 (MQ=255)
                                  tctACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCgg                                                                  >  1:471468/1‑100 (MQ=255)
                                    tACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTg                                                                >  1:1383139/1‑100 (MQ=255)
                                    tACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTg                                                                <  1:2129953/100‑1 (MQ=255)
                                    tACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTg                                                                >  2:356709/1‑100 (MQ=255)
                                      cacCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTgcg                                                              <  2:1329591/100‑1 (MQ=255)
                                        ccTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCa                                                            >  1:2231673/1‑100 (MQ=255)
                                         cTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTgcgc                                                             <  2:1819176/98‑1 (MQ=255)
                                         cTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAg                                                           >  1:85903/1‑100 (MQ=255)
                                           cGGAAGAAGCCGATGCGCCACAATATATGGAACAACTGGGGATGGAGACGGTGCCCGTAGATTCTAAACACACCTTTATGATTATCATCGGTtcgc                                                             >  2:150231/1‑96 (MQ=255)
                                            ggAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATc                                                        <  1:901577/100‑1 (MQ=255)
                                             gaagaaGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATcc                                                       >  2:2127305/1‑100 (MQ=255)
                                             gaagaaGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATcc                                                       >  2:1132757/1‑100 (MQ=255)
                                                gaagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCcgcg                                                    >  2:509378/1‑100 (MQ=255)
                                                 aagCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGa                                                   >  1:2207943/1‑100 (MQ=255)
                                                  agCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaa                                                  >  2:584271/1‑100 (MQ=255)
                                                    ccGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGaaaa                                                >  2:1393940/1‑100 (MQ=255)
                                                      gATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAcc                                              <  2:240120/100‑1 (MQ=255)
                                                      gATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAcc                                              <  1:577761/100‑1 (MQ=255)
                                                      gATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAAcc                                              >  2:928414/1‑100 (MQ=255)
                                                        tGCGCCCCAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCg                                            <  1:466610/100‑1 (MQ=255)
                                                          cgcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGtt                                          >  1:915632/1‑100 (MQ=255)
                                                          cgcCACAGTATATGGAACATCTAGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGtt                                          >  2:1369779/1‑100 (MQ=255)
                                                           gcCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTc                                         <  1:1838543/100‑1 (MQ=255)
                                                              acaGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGAAAAAACCCGTTCCg                                       <  2:238782/99‑1 (MQ=255)
                                                                aGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTa                                    <  2:1700800/100‑1 (MQ=255)
                                                                 gTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTAc                                   >  2:2245095/1‑100 (MQ=255)
                                                                  tataTGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACt                                  >  2:1099690/1‑100 (MQ=255)
                                                                   atatGGGACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTg                                 <  1:95397/100‑1 (MQ=255)
                                                                   atatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTg                                 >  2:1202167/1‑100 (MQ=255)
                                                                   atatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTg                                 >  2:289754/1‑100 (MQ=255)
                                                                   atatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTg                                 <  2:2035582/100‑1 (MQ=255)
                                                                    tatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTgg                                >  1:2057238/1‑100 (MQ=255)
                                                                    tatGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTgg                                <  2:418878/100‑1 (MQ=255)
                                                                      tGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGa                              >  2:476718/1‑100 (MQ=255)
                                                                        gAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAat                            >  2:340614/1‑100 (MQ=255)
                                                                         aaCATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAata                           <  2:1483521/100‑1 (MQ=255)
                                                                           cATCTGGGGATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccct                         <  2:171217‑M2/100‑76 (MQ=255)
                                                                             tCTGGGGATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatcccttt                       <  2:20882‑M2/100‑78 (MQ=255)
                                                                              cTGGGGATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagatccggctggatccctttt                      <  2:1820204‑M2/100‑79 (MQ=255)
                                                                               tGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTcc                     <  1:788010/100‑1 (MQ=255)
                                                                                ggggATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCt                    >  1:501465/1‑100 (MQ=255)
                                                                                ggggATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCAGCGAAAAACAGTTCCGCTACTGGGAATATATTCCt                    >  2:1969521/1‑100 (MQ=255)
                                                                                 gggATCGAGACGGTGCTGGtcgatccccagatgttccatatactgtggcgcatcggcttcttccgaggtgtagatcagagccggccggggccc                          <  2:2166096‑M2/93‑75 (MQ=255)
                                                                                   gATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTAcc                 <  1:930487/100‑1 (MQ=255)
                                                                                   gATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTAcc                 >  1:975514/1‑100 (MQ=255)
                                                                                   gATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTAcc                 >  1:1717002/1‑100 (MQ=255)
                                                                                       gagaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg             >  2:1099372/1‑100 (MQ=255)
                                                                                       gagaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAg             <  1:356711/100‑1 (MQ=255)
                                                                                        agaCGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGt            <  1:1339205/100‑1 (MQ=255)
                                                                                           cGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGaa         <  1:355132/100‑1 (MQ=255)
                                                                                           cGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGaa         >  1:198160/1‑100 (MQ=255)
                                                                                            ggTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAg        <  2:1998432/100‑1 (MQ=255)
                                                                                            ggTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAg        <  2:2104447/100‑1 (MQ=255)
                                                                                            ggTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAg        <  1:1352445/100‑1 (MQ=255)
                                                                                            ggTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAg        >  1:396271/1‑100 (MQ=255)
                                                                                              tGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGcc      >  2:98441/1‑100 (MQ=255)
                                                                                               gCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCg     >  2:425344/1‑100 (MQ=255)
                                                                                                ccggTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGt    >  1:1592940/3‑100 (MQ=255)
                                                                                                  ggTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGACTATATTCCTACCGAAGTGAAGCCGttt  >  2:1403916/1‑100 (MQ=255)
                                                                                                  ggTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGttt  >  1:1386355/1‑100 (MQ=255)
                                                                                                   gTCGATCCGAAACGTACCTTTATGAGTATCAGCAGTGCGCACATCCCCGAAAACGCGTTCCGCTACTGGGAATATTTTTCTACCGAAGTGAAGCCGtt   <  2:721779/98‑1 (MQ=255)
                                                                                                   |                                                                                                  
TTTATGGCTGAAAAAGGGATCCAGCCGGATCTGATCTACACCTCGGAAGAAGCCGATGCGCCACAGTATATGGAACATCTGGGGATCGAGACGGTGCTGGTCGATCCGAAACGTACCTTTATGAGTATCAGCGGTGCGCAGATCCGCGAAAACCCGTTCCGCTACTGGGAATATATTCCTACCGAAGTGAAGCCGTTT  >  NC_000913/4627804‑4628001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.