New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1929923 =NA (NA)6 (0.070) 5/172 NT NA noncoding (1/84 nt) REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 1929955 = NA (NA)noncoding (33/84 nt) REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences REP135 (repetitive extragenic palindromic) element; contains 2 REP sequences

TCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATAT  >  NC_000913/1929856‑1930049
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tCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGcc                                                                                                <  2:484088/100‑1 (MQ=255)
tCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGcc                                                                                                >  1:925508/1‑100 (MQ=255)
tCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGcc                                                                                                <  1:188043/100‑1 (MQ=255)
attcgattgactgttggcggatgcggcgcgagtgtcttgtccgccccagaacgcaccacaatcgtagGCCCGATGCGACGCTGTTGCGTCTTCTCAGGcc                                                                                                >  1:1853133‑M1/68‑100 (MQ=255)
attcgattgactgttggcggatgcggcgcgagtgccttgtccgccccagaacgcaccacaatcgtagGCCCGATGCGACGCTGTTGCGTCTTCTCAGGcc                                                                                                >  2:1334161‑M1/68‑100 (MQ=255)
 cAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCt                                                                                               >  2:401709/1‑100 (MQ=255)
  aGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTa                                                                                              >  1:812259/1‑100 (MQ=255)
   ggTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTAc                                                                                             >  2:1948425/1‑100 (MQ=255)
   cgattgactgttggcggatgcggcgcgagtgccttgtccgccccagaacgcaccacaatcgtagGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTAc                                                                                             >  1:460977‑M1/65‑100 (MQ=255)
     tGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGa                                                                                           >  2:1608757/1‑100 (MQ=255)
      gATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGAt                                                                                          <  1:1456737/100‑1 (MQ=255)
        tAAGGGTATTTTAGGTGAAAGTAGTTCGTAGTATTAGGTGGCATTGTTTCATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTTTCAGGCCTACGATtg                                                                                        <  2:526410/100‑1 (MQ=255)
         aaGGGTATTCTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATtg                                                                                        >  2:735295/1‑99 (MQ=255)
          aGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATtgtg                                                                                      <  1:1066244/100‑1 (MQ=255)
           gggTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATTCGACGCTGTTGCGTCTTCTCAGGCCTACGATtgtg                                                                                      >  2:1836797/1‑99 (MQ=255)
           gggTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTgtgg                                                                                     <  1:949756/100‑1 (MQ=255)
               aTTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCg                                                                                 <  2:326562/100‑1 (MQ=255)
                ttttAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGGGTCTTCTCAGGCCTACGATTGTGGTGCGt                                                                                <  2:109214/100‑1 (MQ=255)
                   tAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCt                                                                             <  1:448664/100‑1 (MQ=255)
                     ggTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTgg                                                                           >  2:2022794/1‑100 (MQ=255)
                       tGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTgggg                                                                         >  2:1530797/1‑100 (MQ=255)
                       tGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTgggg                                                                         <  1:142921/100‑1 (MQ=255)
                         aaaGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCg                                                                       <  2:371849/100‑1 (MQ=255)
                         aaaGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCg                                                                       <  1:1158004/100‑1 (MQ=255)
                         aaaGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCg                                                                       <  1:331618/100‑1 (MQ=255)
                          aaGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCgg                                                                      >  1:974543/1‑100 (MQ=255)
                           agtagtTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGa                                                                     >  2:940761/1‑100 (MQ=255)
                               gtTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAg                                                                 <  1:697327/100‑1 (MQ=255)
                                tttGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAgg                                                                <  1:1062292/100‑1 (MQ=255)
                                tttGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAgg                                                                <  1:1954990/100‑1 (MQ=255)
                                 ttGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGc                                                               <  2:2255576/100‑1 (MQ=255)
                                 ttGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGc                                                               >  2:1855588/1‑100 (MQ=255)
                                 ttGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGc                                                               <  2:1144897/100‑1 (MQ=255)
                                 ttGTCGTTTTGAGTGGCATTGTTTGATGCTGAGTGCCCGATGCGACGCTGTTGCGGCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGc                                                               <  2:1592896/100‑1 (MQ=255)
                                   gTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGCCAAGGCAc                                                             >  1:518785/1‑100 (MQ=255)
                                      gTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTcg                                                          >  2:1386842/1‑100 (MQ=255)
                                      gTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTcg                                                          <  1:1814192/100‑1 (MQ=255)
                                         ttGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCgcgc                                                       <  2:381842/100‑1 (MQ=255)
                                          tGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGcgcc                                                      >  1:1974923/1‑100 (MQ=255)
                                          tGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGcgcc                                                      <  1:550609/100‑1 (MQ=255)
                                            aGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGcgccgc                                                    <  2:2216572/100‑1 (MQ=255)
                                               ggCATTGTGTGATGCTGATCGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGTACTCGCGCCGCa                                                   <  2:1493455/98‑1 (MQ=255)
                                                  aTTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGc                                              >  2:151561/1‑100 (MQ=255)
                                                   ttGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGGTTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGcc                                             <  1:850718/100‑1 (MQ=255)
                                                   ttGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGcc                                             <  1:1724966/100‑1 (MQ=255)
                                                   ttGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGcc                                             <  1:649215/100‑1 (MQ=255)
                                                        tGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAg                                        >  1:716917/1‑100 (MQ=255)
                                                          aTGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTc                                      <  1:735298/100‑1 (MQ=255)
                                                           ttcTGATTGCCCGATGTGACGCTGTTTCGTCTTCTCAGGCCCACGATTGTGGTGCGTGCTGTGGCTGACAAGGCACTCGCGCCGCATCCGCCAACATTc                                      <  2:684440/97‑1 (MQ=255)
                                                            gCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCaa                                    <  1:1948439/100‑1 (MQ=255)
                                                               gtaggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCg                                 >  1:460977‑M2/37‑100 (MQ=255)
                                                               gATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCg                                 >  1:1296114/1‑100 (MQ=255)
                                                                  tGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGCTTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCAGCATCCGCCAACAGTCAATCgca                               >  2:630278/1‑97 (MQ=255)
                                                                  ggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAt                              >  2:1334161‑M2/34‑100 (MQ=255)
                                                                  ggcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGACACTCGCGCCGCATCCGCCAACAGTCAATCGAAt                              >  1:1853133‑M2/34‑100 (MQ=255)
                                                                   gcctgagaagacgcaacagcgtcgcatcgggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                             >  1:53417‑M2/33‑100 (MQ=255)
                                                                   GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                             <  1:1835097‑M1/100‑1 (MQ=255)
                                                                   GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                             <  1:1314646‑M1/100‑1 (MQ=255)
                                                                   GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                             <  1:1729402‑M1/100‑1 (MQ=255)
                                                                   GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                             <  2:2044583‑M1/100‑1 (MQ=255)
                                                                   GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                             <  2:506923‑M1/100‑1 (MQ=255)
                                                                   GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                             >  2:812256‑M1/1‑100 (MQ=255)
                                                                   GCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAAtt                             <  1:618930‑M1/100‑1 (MQ=255)
                                                                      tgagaagacgcaacagcgtcttctcaggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                          >  1:1319832‑M2/30‑100 (MQ=255)
                                                                      cGATGCTGCGCTGTTGCGTCTTTTCAGTCCTACGATTGTGGTGCGTCCTGTGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                          <  2:2343678/100‑1 (MQ=255)
                                                                      cGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATc                          <  1:1923354/100‑1 (MQ=255)
                                                                      cGATGCGACGCTGTTGCGTCTTCTCACGCCTACGATTGTGGTTCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTAt                           <  2:1096874/99‑1 (MQ=255)
                                                                       gagaagacgcaacagcgtcttctcaggcCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                         >  2:1193216‑M2/29‑100 (MQ=255)
                                                                       gATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                         <  1:940766/100‑1 (MQ=255)
                                                                        aTGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCa                         <  1:449720/99‑1 (MQ=255)
                                                                         tGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGa                       <  2:1274146/100‑1 (MQ=255)
                                                                          gCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGan                      <  2:1337317/100‑2 (MQ=255)
                                                                           cGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAg                     <  1:2022809/100‑1 (MQ=255)
                                                                           cGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAg                     >  1:304793/1‑100 (MQ=255)
                                                                            gACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGc                    >  1:2004413/1‑100 (MQ=255)
                                                                            gACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGc                    >  1:292446/1‑100 (MQ=255)
                                                                            gACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGc                    <  1:1149806/100‑1 (MQ=255)
                                                                                 tGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTa               <  2:183430/100‑1 (MQ=255)
                                                                                  gTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTaa              >  1:1625569/1‑100 (MQ=255)
                                                                                  gTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTaa              >  2:1386868/1‑100 (MQ=255)
                                                                                     gCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcgc           >  2:589964/1‑100 (MQ=255)
                                                                                      cGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcgcc          >  1:1665591/1‑100 (MQ=255)
                                                                                       gTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAAcgccg         >  2:1871947/1‑100 (MQ=255)
                                                                                         cttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCt       <  1:2006462/100‑1 (MQ=255)
                                                                                         cttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCt       <  2:1718031/100‑1 (MQ=255)
                                                                                         cttctCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCt       >  2:1267055/1‑100 (MQ=255)
                                                                                           tctcAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGa     >  2:1016814/1‑100 (MQ=255)
                                                                                             tcAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGata   >  1:1430214/1‑100 (MQ=255)
                                                                                              cAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGatat  >  2:154110/1‑100 (MQ=255)
                                                                                              cAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGatat  >  2:1150111/1‑100 (MQ=255)
                                                                                              cAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGatat  >  2:2204862/1‑100 (MQ=255)
                                                                                              cAGGCCTACGATTGTGGTGCGTGCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGatat  >  2:1366261/1‑100 (MQ=255)
                                                                                                   |                                                                                              
TCAGGTGATAAGGGTATTTTAGGTGAAAGTAGTTTGTCGTTTTGAGTGGCATTGTTTGATGCTGATTGCCCGATGCGACGCTGTTGCGTCTTCTCAGGCCTACGATTGTGGTGCGTTCTGGGGCGGACAAGGCACTCGCGCCGCATCCGCCAACAGTCAATCGAATTATCAGAAGCCATTAACGCCGCTGATAT  >  NC_000913/1929856‑1930049

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.