| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 281,599 | C→T | 63.8% | G129S (GGC→AGC) | yagA ← | CP4‑6 prophage; putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 281,599 | 0 | C | T | 63.8% | 72.2 / 101.8 | 104 | G129S (GGC→AGC) | yagA | CP4‑6 prophage; putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (16/21); new base T (27/39); total (44/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.38e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.37e-01 | |||||||||||
Only 100 of 104 total aligned reads displayed.
TGGCAGCGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAGCCAGCGCTTA > NC_000913/281502‑281696 | tGGCAGCGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCg < 1:79620/100‑1 (MQ=255) ggCAGCGTCCACCGTCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCgg < 2:1600225/100‑1 (MQ=255) ggCAGCGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCgg > 1:1508808/1‑100 (MQ=255) gCAGCGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGt < 2:898429/100‑1 (MQ=255) gCAGCGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGt < 1:1705167/100‑1 (MQ=255) cAGCGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTg > 1:1126086/1‑100 (MQ=255) gCGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGGTCGAACCGGCCCGTGGCGGGAATGCTCGGTGaa > 1:1644935/1‑100 (MQ=255) cGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAg > 2:2262893/1‑100 (MQ=255) gTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAgc > 1:922236/1‑100 (MQ=255) cACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGcc > 1:766535/1‑100 (MQ=255) aCCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGccc > 1:1657275/1‑100 (MQ=255) aCCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGccc > 1:165885/1‑100 (MQ=255) cGCTAAAAGGAAAGTGGCTATAAAAATCCATCGACCAAAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGCAATGCTCGGTGGAgc < 2:121892/94‑1 (MQ=255) gCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCgac > 1:985230/1‑98 (MQ=255) gCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGgc > 1:1424019/1‑100 (MQ=255) gCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTAGCGGGAATGCCCGGTGAAGCGCCCGgc > 1:1485333/1‑100 (MQ=255) ccAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGgca > 1:874078/1‑100 (MQ=255) ccAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGgc > 2:1324525/1‑99 (MQ=255) ccAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGgca < 1:1844186/100‑1 (MQ=255) cAAACGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGgcag > 1:2307593/1‑100 (MQ=255) cAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGACCCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGgcag > 2:2215118/1‑100 (MQ=255) cAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGgcag < 2:1846047/100‑1 (MQ=255) cAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGgcag > 1:499145/1‑100 (MQ=255) aaGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGcagcag < 1:395382/100‑1 (MQ=255) aGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGCATGCCCGGTGAAGCGCCCGGCAGCAgg > 2:1998829/1‑100 (MQ=255) aGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAgg < 2:664134/100‑1 (MQ=255) aGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAgg > 1:1382289/1‑100 (MQ=255) aGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAgg < 2:388075/100‑1 (MQ=255) ggAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGc < 1:1762432/100‑1 (MQ=255) gAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGcc < 2:2024804/100‑1 (MQ=255) aaaGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCa < 2:1296858/100‑1 (MQ=255) gTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATgg > 1:1681776/1‑100 (MQ=255) tGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGc < 2:477106/100‑1 (MQ=255) cccTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCggg < 1:847381/100‑1 (MQ=255) ccTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGc < 1:1172264/100‑1 (MQ=255) ccTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCACGGCGGGc < 1:1240651/100‑1 (MQ=255) ccTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGGGAAGCGCCCGGCAGCAGGCCATGGCGGGc > 1:57885/1‑100 (MQ=255) ccTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGc < 1:145129/100‑1 (MQ=255) cTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGcc > 2:329142/1‑100 (MQ=255) cTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGcc > 2:453057/1‑100 (MQ=255) tAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCAt > 2:1126888/1‑100 (MQ=255) aaaaTCCATCTGCCAGCGGCCGTTGGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATc < 2:1909178/100‑1 (MQ=255) aaaaTCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATc < 2:1388830/100‑1 (MQ=255) aTCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAg < 2:614350/99‑1 (MQ=255) aTCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAgg < 2:1670412/100‑1 (MQ=255) aTCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAgg < 1:989586/100‑1 (MQ=255) ccATCTGCCAGAGGCGGTTCGGCGCGTCGTTTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATCGCGGGCCATCAg > 2:688313/1‑97 (MQ=255) ccATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGtt < 2:1013719/100‑1 (MQ=255) ccATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGtt < 1:1009779/100‑1 (MQ=255) ccAGCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGt < 2:1774665/99‑1 (MQ=255) cATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTa < 1:322381/100‑1 (MQ=255) aTCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTAt > 1:1888980/1‑100 (MQ=255) aTCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTAt < 2:1194455/100‑1 (MQ=255) cTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATgg > 1:63275/1‑100 (MQ=255) cTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGGGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATgg < 2:2004709/100‑1 (MQ=255) cTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAAACGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATgg > 2:1553649/1‑100 (MQ=255) tGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGa > 1:173706/1‑100 (MQ=255) cAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACg > 2:1753940/1‑99 (MQ=255) cAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACgg < 1:1359376/100‑1 (MQ=255) cAGAGGCGGGTCGGCGCGTCGTGCTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGACATCAGGTTATGGACgg < 2:1697773/100‑1 (MQ=255) agGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAACGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGc < 1:1359053/100‑1 (MQ=255) ggCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCt > 1:632825/1‑100 (MQ=255) ggCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCt < 1:912765/100‑1 (MQ=255) gCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTg < 2:437863/100‑1 (MQ=255) cGGTTCGGCGCGTCGAGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGa > 1:262951/1‑100 (MQ=255) tCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGc < 1:2262912/100‑1 (MQ=255) ggCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCgg > 1:479755/1‑100 (MQ=255) gcgTCGTGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCa < 2:755484/100‑1 (MQ=255) cgtcgtGTTCGAACCGGCCCGTGGAGGGAATGCTCGGTGAAGCGCCCGGCAGCAGTCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGc > 2:1562889/1‑98 (MQ=255) tcgtGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATgg < 1:1425443/100‑1 (MQ=255) tcgtGTTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATgg < 1:861744/100‑1 (MQ=255) gtgtTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGgtg < 1:289633/100‑1 (MQ=255) gggtTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGgtg < 2:1126081/98‑1 (MQ=255) tgtTCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGgtgt < 2:1595402/100‑1 (MQ=255) tgtTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGgtgt > 1:606868/1‑100 (MQ=255) gtTCGAACCGGCCCTTTGCGGGAATACTCGGTGAGGCGCCCGGCAACAGGCCATGGCGGGCCAACAGGTCATGGAACGGGCTCAAGCCGAGCAAGgt > 2:1387531/1‑97 (MQ=255) tCGAACCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGcc > 1:1896159/1‑100 (MQ=255) tCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGcc > 2:2291497/1‑100 (MQ=255) cGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGccc < 2:733540/100‑1 (MQ=255) aaCCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGcccc < 2:1755309/99‑1 (MQ=255) aCCGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTg > 1:2050346/1‑100 (MQ=255) ccGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTgg < 1:1213421/100‑1 (MQ=255) ccGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTg < 2:1610953/99‑1 (MQ=255) ccGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTgg < 2:643205/100‑1 (MQ=255) cGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATTGTGTGCCCCTGGt < 2:1457455/100‑1 (MQ=255) cGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGt < 2:752944/100‑1 (MQ=255) cGGCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGt < 2:748484/100‑1 (MQ=255) ggCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTc > 2:226435/1‑100 (MQ=255) gCCCGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTcc < 2:849343/100‑1 (MQ=255) ccGTGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTc < 1:980639/100‑1 (MQ=255) gTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGa > 2:891469/1‑100 (MQ=255) tGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGTTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAg < 2:1254067/100‑1 (MQ=255) tGGCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAg < 1:1110540/100‑1 (MQ=255) tGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAg < 2:571884/100‑1 (MQ=255) ggCGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCAGGGCGGGCCATGAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAGc < 2:2307572/100‑1 (MQ=255) cGGGAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAGcc < 2:884651/99‑1 (MQ=255) gggAATGCTCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAGCCAg > 1:1156392/1‑100 (MQ=255) aTGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAGCCAgcgc < 2:36500/99‑1 (MQ=255) tGCTCGGTGAAGCGCCCGGCAGCGGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAGCCAGCGCtt < 2:361934/100‑1 (MQ=255) gCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAGCCAGCGCTTa > 1:938118/1‑100 (MQ=255) | TGGCAGCGTCCACCGCCAAAAGGAAAGTGGCCCTTAAAATCCATCTGCCAGAGGCGGTTCGGCGCGTCGTGTTCGAACCGGCCCGTGGCGGGAATGCCCGGTGAAGCGCCCGGCAGCAGGCCATGGCGGGCCATCAGGTTATGGACGGTGCTGAAGGCGGGCATGGTGTGCCCCTGGTCCTCGAGCCAGCGCTTA > NC_000913/281502‑281696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |