| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,531,596 | (G)6→5 | coding (134/762 nt) | cysZ → | sulfate transporter, sulfite inhibited |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,531,591 | 0 | G | . | 93.8% | 276.8 / 12.7 | 65 | coding (129/762 nt) | cysZ | sulfate transporter, sulfite inhibited |
| Reads supporting (aligned to +/- strand): ref base G (2/2); new base . (23/38); total (25/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
CAGCGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATGGGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGAGTTATCT > NC_000913/2531492‑2531686 | cAGCGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATg < 2:1683694/100‑1 (MQ=255)cAGCGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATg < 1:1904227/100‑1 (MQ=255) aGCGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATgg > 1:60768/1‑100 (MQ=255) gCGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCCATATTTTGTTGATggg < 1:2085709/100‑1 (MQ=255) cGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATgggg > 2:1321173/1‑100 (MQ=255) gTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATgggggc < 2:2058217/100‑2 (MQ=255) cTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCt > 1:1117713/1‑100 (MQ=255) cTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCt > 1:654126/1‑100 (MQ=255) cTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCt > 1:1540268/1‑100 (MQ=255) aTTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCtgg < 2:674543/100‑1 (MQ=255) aTTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCtgg > 2:1025207/1‑100 (MQ=255) ttttGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCtggt > 1:357975/1‑100 (MQ=255) tttGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCtggtg < 1:761750/100‑1 (MQ=255) tttGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCtggtg < 2:174537/100‑1 (MQ=255) tttGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCtggtg < 2:572926/100‑1 (MQ=255) ttGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATGGGGGGCGCATTCtggtg < 2:412105/100‑1 (MQ=255) cgcAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGctc > 1:73642/1‑100 (MQ=255) gcAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGctct > 1:1844064/1‑100 (MQ=255) cAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCtt < 2:1660138/100‑1 (MQ=255) cAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCtt < 2:1144176/100‑1 (MQ=255) aGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTa < 1:281917/100‑1 (MQ=255) ggCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTac < 1:418943/100‑1 (MQ=255) cTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTacac < 1:76864/100‑1 (MQ=255) cTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTacac < 1:1943739/100‑1 (MQ=255) tGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTTGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTAcaca < 1:1239230/100‑1 (MQ=255) tGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATGGGGGGCGCATTCTGGTGGCTCTTTacac < 1:1172685/100‑1 (MQ=255) tGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTAcaca < 2:1353290/100‑1 (MQ=255) ggAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTAcaca < 2:949955/99‑1 (MQ=255) ggAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAg > 2:796818/1‑100 (MQ=255) aGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTc < 2:1117363/100‑1 (MQ=255) gCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCg > 1:1026870/1‑100 (MQ=255) cTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGa > 2:798511/1‑100 (MQ=255) tCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGAt > 1:585125/1‑100 (MQ=255) cGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATg < 2:156745/100‑1 (MQ=255) cGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATg < 2:156850/100‑1 (MQ=255) tctcGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTc > 1:1847315/1‑100 (MQ=255) tcGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTg < 2:107857/100‑1 (MQ=255) tcGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTg < 1:1729362/100‑1 (MQ=255) tcGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTg < 2:357976/100‑1 (MQ=255) cGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATGGGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTg > 1:1438451/1‑100 (MQ=255) gCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCAGTCTGGTGGCTCTTTACACAGCTCGATGTCTGGa > 2:1928619/1‑100 (MQ=255) cAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGAt < 2:804880/100‑1 (MQ=255) cAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGAt < 1:1825500/100‑1 (MQ=255) ccTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATccc < 1:1505371/100‑1 (MQ=255) ccTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATccc < 1:514965/100‑1 (MQ=255) cTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCg > 1:1112647/1‑100 (MQ=255) cTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCg > 2:1607793/1‑100 (MQ=255) tCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCa < 2:1250326/100‑1 (MQ=255) ggCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACTCAGCTCGATGTCTGGATCCCGACTCTCATg < 2:60768/100‑1 (MQ=255) ggCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATg < 2:1695028/100‑1 (MQ=255) ggCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATg > 1:554907/1‑100 (MQ=255) tttCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGtt > 2:1457652/1‑100 (MQ=255) cGTTATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACg > 2:287068/1‑100 (MQ=255) attATTTTACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGt < 2:1529214/99‑1 (MQ=255) ttttACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCg > 1:97928/1‑100 (MQ=255) ttttACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCg < 2:588928/100‑1 (MQ=255) tACCGCTGCTGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGAc > 1:287097/1‑100 (MQ=255) gctgctGGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGc < 2:899341/100‑1 (MQ=255) ctgctgGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCt > 2:1470581/1‑100 (MQ=255) gctgGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTAc < 1:288839/100‑1 (MQ=255) gctgGTCAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTAc < 2:903519/100‑1 (MQ=255) cAATATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGc < 2:939292/100‑1 (MQ=255) aaTATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCt < 2:1283253/100‑1 (MQ=255) aaTATTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCt < 2:301828/100‑1 (MQ=255) atatTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTg > 1:843963/1‑100 (MQ=255) tatTTTGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGa < 1:1400300/100‑1 (MQ=255) ttttGTTGAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGAGt < 1:992228/100‑1 (MQ=255) ttgttgAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGAGTTa > 2:205310/1‑100 (MQ=255) gttgAT‑GGGGGCGCGTTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGAGTTATc < 1:502921/100‑1 (MQ=255) gttgAT‑GGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGAGTTATc < 2:871140/100‑1 (MQ=255) tgATGGGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCGTGAGTTACGTTCCGGACTGGCTACAATGGCTGAGTTATCt > 2:723286/1‑100 (MQ=255) | CAGCGGTTTTTACTATTTTGCGCAAGGCTGGAAGCTCGTCTCGCAACCTGGGATTCGGCGTTTCGTTATTTTACCGCTGCTGGTCAATATTTTGTTGATGGGGGGCGCATTCTGGTGGCTCTTTACACAGCTCGATGTCTGGATCCCGACTCTCATGAGTTACGTTCCGGACTGGCTACAATGGCTGAGTTATCT > NC_000913/2531492‑2531686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |