Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,597,313 (C)7→8 pseudogene (675/3861 nt) yneO ← pseudogene, AidA homolog

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,597,3061.C91.4% 267.4 / 21.1 82pseudogene (682/3861 nt)yneOpseudogene, AidA homolog
Reads supporting (aligned to +/- strand):  ref base . (4/3);  new base C (32/42);  total (36/46)
Fisher's exact test for biased strand distribution p-value = 6.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACC  >  NC_000913/1597208‑1597399
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gagTCTGTGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTaacca‑‑a‑‑c                                                                                                <  2:728362/100‑1 (MQ=255)
 agTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTaacca‑‑a‑‑cc                                                                                               >  1:2179348/1‑100 (MQ=255)
  gTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑cc‑c                                                                                             >  1:1188107/1‑100 (MQ=255)
  gTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑cc‑c                                                                                             <  2:1728837/100‑1 (MQ=255)
      gCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑cc‑cc‑ccc                                                                                        <  1:1394975/100‑1 (MQ=255)
       cGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑cc‑cc‑cccc                                                                                       >  2:1714398/1‑99 (MQ=255)
         tACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑cc‑cc‑cccctc                                                                                     <  1:995864/100‑4 (MQ=255)
         tACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑cc‑cc‑cccctc                                                                                     >  2:159138/1‑97 (MQ=255)
         tACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑cc‑cc‑cccctc                                                                                     <  2:1821846/100‑4 (MQ=255)
          aCCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑cc‑cc‑cccctcg                                                                                    >  2:2035798/1‑96 (MQ=255)
            cGTGATGACAGAGTCTTGATCCTGCACATTCACGGTTCCTATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTcgcg                                                                                   <  1:1565028/100‑1 (MQ=255)
             gTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGa                                                                                  <  1:2145055/100‑1 (MQ=255)
             gTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGa                                                                                  >  2:2105959/1‑100 (MQ=255)
                   aCAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTc                                                                            <  2:556614/100‑1 (MQ=255)
                    cAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCg                                                                           >  2:78428/1‑100 (MQ=255)
                    cAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCg                                                                           >  2:87245/1‑100 (MQ=255)
                    cAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCg                                                                           >  2:1356358/1‑100 (MQ=255)
                    cAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCg                                                                           <  2:1286792/100‑1 (MQ=255)
                     agagTCTTGATCCTGCACATTCAGGGTTCCGGTACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCACCC‑‑CC‑CC‑CCCTCGCGAATAg                                                                              <  1:2194588/97‑1 (MQ=255)
                        gTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTc                                                                       >  1:783241/1‑100 (MQ=255)
                          cTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTccc                                                                     >  1:243404/1‑100 (MQ=255)
                          cTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTccc                                                                     >  2:160921/1‑100 (MQ=255)
                          cTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTccc                                                                     >  2:1871780/1‑100 (MQ=255)
                           ttGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTcccc                                                                    <  1:1121428/100‑1 (MQ=255)
                                 cTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTcc                                                              >  1:1019880/1‑100 (MQ=255)
                                 cTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTcc                                                              >  1:618963/1‑100 (MQ=255)
                                  tGCACATTCATGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCt                                                             <  2:989846/100‑1 (MQ=255)
                                  tGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCt                                                             >  2:1231406/1‑100 (MQ=255)
                                  tGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCt                                                             <  2:616062/100‑1 (MQ=255)
                                   gCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCtt                                                            <  2:1339942/100‑1 (MQ=255)
                                   gCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCtt                                                            <  2:1336909/100‑1 (MQ=255)
                                   gCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCtt                                                            <  1:78428/100‑1 (MQ=255)
                                    cacaTTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTg                                                           <  1:2105947/100‑1 (MQ=255)
                                    cacaTTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑CCTCC‑CCCTCGCGAATATTCTCCCCCCCAGCTCCTTg                                                           >  2:2087420/1‑100 (MQ=255)
                                      caTTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGAt                                                         >  2:1401042/1‑100 (MQ=255)
                                       aTTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGAtt                                                        <  1:2221595/100‑1 (MQ=255)
                                       aTTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGAtt                                                        >  2:1560969/1‑100 (MQ=255)
                                         tCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAc                                                      <  1:2023363/100‑1 (MQ=255)
                                         tCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAcc                                                     <  2:436867/100‑1 (MQ=255)
                                          cAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAcc                                                     <  1:2035786/100‑1 (MQ=255)
                                          cAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAcc                                                     <  2:1391268/100‑1 (MQ=255)
                                          cAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTAcc                                                     <  2:1661083/100‑1 (MQ=255)
                                           aGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCa                                                    >  1:9278/1‑100 (MQ=255)
                                                 ccGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑CC‑CCTCCCTCGCGAATAGTCGCCTCCCCACTTCCTTAATTACCAAATTGa                                              >  2:245096/1‑100 (MQ=255)
                                                  cGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGan                                             <  2:618964/100‑2 (MQ=255)
                                                  cGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGaa                                             <  2:438772/100‑1 (MQ=255)
                                                     tACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAAtt                                          <  2:143653/100‑1 (MQ=255)
                                                      aCCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAAttn                                         <  1:679438/100‑2 (MQ=255)
                                                       ccGGTTCCAGTGCCACCGATAATAGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTc                                         <  2:1993859/99‑1 (MQ=255)
                                                       ccGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCa                                        >  2:1096120/1‑100 (MQ=255)
                                                         ggTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAAt                                      <  1:1356356/100‑1 (MQ=255)
                                                         ggTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAAtt                                     >  1:817184/1‑100 (MQ=255)
                                                             gCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAg                                  >  2:10987/1‑100 (MQ=255)
                                                              cATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAgn                                 <  1:1155020/100‑2 (MQ=255)
                                                              cATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAgg                                 <  1:1882912/100‑1 (MQ=255)
                                                              cATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGa                                >  2:1561251/1‑100 (MQ=255)
                                                                ttGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑ATCCC‑CC‑CCCTCGCGAATAGTCGCCTCTCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAgg                                 <  1:687491/99‑1 (MQ=255)
                                                                ttGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGaa                               <  2:1621129/100‑1 (MQ=255)
                                                                  gCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCTCCTCCCCCGTTCCTTGATTACCAATTTGAACTTCAATTGAGGAATc                             >  1:1928830/1‑100 (MQ=255)
                                                                  gCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATc                             >  1:714819/1‑100 (MQ=255)
                                                                   ccACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑CA‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGAGTACCAATTTGAAATTCAATTGAGGAATCat                           <  1:2192808/100‑1 (MQ=255)
                                                                    cACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCGCATTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCat                           >  1:1561197/1‑100 (MQ=255)
                                                                    cACCGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCat                           <  2:417229/100‑1 (MQ=255)
                                                                       cGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCCGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCattat                        >  2:1394551/1‑100 (MQ=255)
                                                                       cGATAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCattat                        <  1:760171/100‑1 (MQ=255)
                                                                          tAATCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAtttt                     >  2:1861176/1‑100 (MQ=255)
                                                                           aaTCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAttttt                    <  2:2179360/100‑1 (MQ=255)
                                                                           aaTCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAttttt                    <  1:1526685/100‑1 (MQ=255)
                                                                            aTCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAtttttt                   >  1:1971421/1‑100 (MQ=255)
                                                                             tCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTtta                  <  1:1267092/100‑1 (MQ=255)
                                                                             tCGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGCTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTAtttttt                   >  1:363148/1‑99 (MQ=255)
                                                                              cGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCGCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTttat                 <  1:87245/100‑1 (MQ=255)
                                                                              cGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTttat                 <  1:1817339/100‑1 (MQ=255)
                                                                              cGTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTttat                 <  1:1258859/100‑1 (MQ=255)
                                                                               gTATTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTttatt                >  1:351570/1‑100 (MQ=255)
                                                                               gTATTTCCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCAAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTttatt                <  1:917960/100‑1 (MQ=255)
                                                                                 aTTTTCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAg              <  1:159138/100‑1 (MQ=255)
                                                                                  ttttCAGCCGTAACCA‑‑ACCCC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAg              <  2:105851/100‑1 (MQ=255)
                                                                                  ttttCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTTTTAGc             >  1:810682/1‑100 (MQ=255)
                                                                                   tttCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGcc            <  1:733358/100‑1 (MQ=255)
                                                                                   tttCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGcc            <  2:1904431/100‑1 (MQ=255)
                                                                                   tttCAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGcc            >  2:271032/1‑100 (MQ=255)
                                                                                      cAGCCGTAACCA‑‑AC‑CC‑CC‑CCCTAGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCCATTTGAAATTCAATTGAAGAATCATTATTTTTTATTAGCCACt         >  2:1729370/1‑100 (MQ=255)
                                                                                        gCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCg       >  2:403417/1‑100 (MQ=255)
                                                                                        gCCGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCg       <  2:1245181/100‑1 (MQ=255)
                                                                                         ccGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTccc      >  1:1202434/1‑98 (MQ=255)
                                                                                         ccGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGc      >  2:1578178/1‑100 (MQ=255)
                                                                                          cGTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGcc     >  1:193035/1‑100 (MQ=255)
                                                                                           gTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGGTTACCAAGTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGGCACTCGCCa    >  2:1889889/1‑100 (MQ=255)
                                                                                           gTAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCGCCCCAGCTCCTTTATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGcc     <  1:1560961/99‑1 (MQ=255)
                                                                                            tAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCAc   <  2:1986437/100‑1 (MQ=255)
                                                                                            tAACCA‑‑AC‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCAc   <  2:193035/100‑1 (MQ=255)
                                                                                             aacca‑‑ac‑cC‑CC‑CCCTCGCGAATAGTCGCCCCCCCAGTTCCTTGATTACCCATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCAcc  >  1:926490/1‑100 (MQ=255)
                                                                                                     |                                                                                                
GAGTCTGCGTACCGTGATGACAGAGTCTTGATCCTGCACATTCAGGGTTCCGATACCGGTGGCATTGCCACCGATAATCGTATTTTCAGCCGTAACCA‑‑A‑‑CC‑CC‑CCCTCGCGAATAGTCGCCTCCCCAGTTCCTTGATTACCAATTTGAAATTCAATTGAGGAATCATTATTTTTTATTAGCCACTCGCCACC  >  NC_000913/1597208‑1597399

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑