New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 18232680 (0.870)6 (0.070) 6/178 10.3 7.5% intergenic (+18/‑137) degP/cdaR serine endoprotease (protease Do), membrane‑associated/carbohydrate diacid regulon transcriptional regulator; autoregulator
?NC_000913 = 182334 76 (0.920)intergenic (+26/‑129) degP/cdaR serine endoprotease (protease Do), membrane‑associated/carbohydrate diacid regulon transcriptional regulator; autoregulator
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

GAACTGCGTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/182219‑182326
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccccttccCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTGTCG  <  NC_000913/182334‑182236
                                                                                                                                                                                                               
GAACTGCGTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGAGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAA                                                                                                             >  1:1418904/1‑100
  ACTGCGTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACC                                                                                                           <  2:2103198/100‑1
    TGCGTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCC                                                                                                         <  1:33171/100‑1
     GCGTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCT                                                                                                        >  2:241001/1‑100
     GCGTAAAGTTCTCGACAGCAAAACGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCT                                                                                                        >  1:1294032/1‑100
       GTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTC                                                                                                      >  1:811600/1‑100
        TAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTCC                                                                                                     >  2:502858/1‑100
        TAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTCC                                                                                                     <  2:1962039/100‑1
          AAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTCCCG                                                                                                   >  2:1419438/1‑100
                       CAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTCCCGTTTTCAGGAAGGG                                                                                      <  1:571123/100‑1
                           CCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTCCCGTTTTCAGGAAGGGGTTG                                                                                  <  1:1251452/100‑1
                              TCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTCCCGTTTTCAGGAAGGGGTTGAGG                                                                               <  1:1235446/100‑1
                               CTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTATCTGTTAATGCAGTAATCTCCCTCAACCCCTTCCCGTTTTCAGGAAGGGGTTGAGGG                                                                              <  1:1419432/100‑1
                                                          GCGACAGCACCATCTACCTGTTAATGCAGTAATCTGCCTCAACCCCTTCCCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGT                                                   <  1:1642656/100‑1
                                                                                                    CCCCTTCCCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTT         >  2:431850/1‑100
                                                                                                      CCTTCCCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGC       >  2:1176175/1‑100
                                                                                                      CCTTCCCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGC       <  2:1432108/100‑1
                                                                                                        TTCCCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTG     <  1:1176173/100‑1
                                                                                                         TCCCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTGT    >  1:2044170/1‑100
                                                                                                          CCCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTGTC   <  2:1834394/100‑1
                                                                                                           CCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTGTCG  <  1:1987160/100‑1
                                                                                                           CCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTGTCG  <  1:775222/100‑1
                                                                                                           CCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTGTCG  >  1:834602/1‑100
                                                                                                           CCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTGTCG  <  2:1162584/100‑1
                                                                                                                                                                                                               
GAACTGCGTAAAGTTCTCGACAGCAAACCGTCTGTGCTGGCACTCAACATTCAGCGCGGCGACAGCACCATCTACCTGTTAATGCAGTAATCTCCCTCAACCCCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/182219‑182326
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaccccttccCGTTTTCAGGAAGGGGTTGAGGGAGATTACTGCATTAACAGGTAGATGGTGCTGTCGCCGCGCTGAATGTTGAGTGCCAGCACAGACGGTTTGCTGTCG  <  NC_000913/182334‑182236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.