| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,588,915:1 | (G)5→6 | 100% | coding (1321/3114 nt) | acrD → | aminoglycoside/multidrug efflux system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,588,910 | 1 | . | G | 76.5% | 279.3 / 92.5 | 102 | coding (1316/3114 nt) | acrD | aminoglycoside/multidrug efflux system |
| Reads supporting (aligned to +/- strand): ref base . (8/16); new base G (47/31); total (55/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.38e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TGGATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTTCTCT > NC_000913/2588811‑2589007 | tggATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCa > 2:1377362/1‑100 (MQ=255) ggATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑g > 2:1921886/1‑100 (MQ=255) gATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑gg < 1:1484991/100‑1 (MQ=255) aTGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑ggg > 2:1585122/1‑100 (MQ=255) aTGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑ggg > 2:2211804/1‑100 (MQ=255) tGACGCCATCGTGGTGGTGGAACACGTCGAACGTATTATGAGTGAGGAAGGACGCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑gggg < 1:756478/100‑1 (MQ=255) tGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑gggg < 2:1483486/100‑1 (MQ=255) tGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑gggg < 2:2150906/100‑1 (MQ=255) gACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑ggggg > 1:1061143/1‑100 (MQ=255) gACGCCATCGTGGGGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑gg > 1:247912/1‑97 (MQ=255) cGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑ggggggc > 2:1874206/1‑98 (MQ=255) cGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑ggggggc > 2:3013002/1‑98 (MQ=255) cGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCa > 2:600638/1‑100 (MQ=255) ccATCGTGGTTGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGCAAATCGATGGGGCAGATCCA‑gggggg > 1:2438857/1‑96 (MQ=255) ccATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑ggggggcac < 2:1112469/100‑5 (MQ=255) cATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑ggggggcact < 1:599831/100‑6 (MQ=255) cATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑ggggggcact < 1:1811819/100‑6 (MQ=255) tggtggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCg > 1:2974208/1‑100 (MQ=255) gtggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCggg < 1:2029194/100‑1 (MQ=255) tggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGa > 2:730885/1‑100 (MQ=255) ggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGAt < 2:1102201/100‑1 (MQ=255) ggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGAt > 2:687049/1‑100 (MQ=255) ggtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGAt < 2:49938/100‑1 (MQ=255) gtggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGAtt > 1:2198390/1‑100 (MQ=255) tggAAAGCGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCAAACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGAtt > 1:826032/1‑99 (MQ=255) ggAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGc > 2:1108211/1‑100 (MQ=255) aaaaCGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGa > 2:1395283/1‑100 (MQ=255) aCGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGt < 1:1226597/100‑1 (MQ=255) aCGTCGAACGTATTATGAGTGAGGAAGAACTCACTCCTCGCGAACCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATgg > 2:617341/1‑100 (MQ=255) cGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGt > 2:252611/1‑100 (MQ=255) cGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGt > 1:1658963/1‑100 (MQ=255) tCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTc < 2:2281943/100‑1 (MQ=255) cGAACGTATTATGAGTGAGGAAGGATTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCtt > 2:198610/1‑100 (MQ=255) aaCGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCttt < 2:1343305/100‑1 (MQ=255) cGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTcg < 1:841750/100‑1 (MQ=255) gTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGCTGGTTCTTTcgg < 1:2863773/100‑1 (MQ=255) gTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTcgg > 1:2886513/1‑100 (MQ=255) tattatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTcggc > 2:1954431/1‑100 (MQ=255) tattatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTcggc < 1:1755728/100‑1 (MQ=255) tattatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTcggcg > 2:642713/1‑100 (MQ=255) tattatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTcggcg > 2:1706090/1‑100 (MQ=255) tattatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTcggcg > 1:2118960/1‑100 (MQ=255) nttatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTcggcg > 1:362546/2‑100 (MQ=255) ttatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTcggcgg < 1:1423450/100‑1 (MQ=255) ttatGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTcggcgg < 2:635716/100‑1 (MQ=255) atGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTa > 1:1488051/1‑100 (MQ=255) atGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTa > 2:477052/1‑100 (MQ=255) tgagtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGGTTGCGATGGTTCTTTCGGCGGTAt > 2:2458569/1‑100 (MQ=255) gagtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTAtt < 1:2083141/100‑1 (MQ=255) gagtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTAtt > 1:1568974/1‑100 (MQ=255) gagtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTAtt < 2:2434997/100‑1 (MQ=255) agtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTAttt > 2:1667627/1‑100 (MQ=255) gtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTg > 1:1845703/1‑100 (MQ=255) gtgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTg > 2:1292843/1‑100 (MQ=255) tgagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGt > 2:2238651/1‑100 (MQ=255) gagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTa > 1:2018712/1‑100 (MQ=255) gagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTa > 1:1042904/1‑100 (MQ=255) gagGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTa < 2:2812549/100‑1 (MQ=255) ggaaggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTAcc < 1:2236939/100‑1 (MQ=255) ggaaggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCa > 2:1090474/1‑100 (MQ=255) aaggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAAt < 2:248984/100‑1 (MQ=255) aaggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAAt < 1:1764371/100‑1 (MQ=255) aggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAAt > 2:2494176/1‑100 (MQ=255) aggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAAt > 1:1059741/1‑100 (MQ=255) ggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATg < 2:1145838/100‑1 (MQ=255) ggaCTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATgg < 2:2683714/100‑1 (MQ=255) attcactcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GTGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGcc < 1:198608/98‑1 (MQ=255) actcactcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGc > 2:1712362/1‑100 (MQ=255) ctcactcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGcc > 2:843183/1‑100 (MQ=255) ctcactcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCct < 1:2211791/100‑1 (MQ=255) cactcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCctt > 1:1505473/1‑100 (MQ=255) cactcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCctt < 1:884141/100‑1 (MQ=255) cactcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCctt > 1:193309/1‑100 (MQ=255) actcCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCcttct < 1:2476451/100‑1 (MQ=255) ctcctcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCcttct > 2:120578/1‑100 (MQ=255) ctcctcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCcttct > 2:2441263/1‑100 (MQ=255) cctcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCttcttc > 2:1195011/1‑100 (MQ=255) ctcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcg < 2:2711175/100‑1 (MQ=255) ctcGCGAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcg > 1:1681223/1‑100 (MQ=255) cgcgAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcggc < 2:1873485/100‑1 (MQ=255) cgcgAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcggcg > 2:2686226/1‑100 (MQ=255) cgAAGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTcggcgg > 1:80326/1‑100 (MQ=255) aaGCCACACGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGca < 2:802340/100‑1 (MQ=255) aGCCACACGTAAATCGATGGGGCAGAGCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGcacc < 1:1440567/100‑1 (MQ=255) cacaCGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGcaccac > 1:1700081/1‑100 (MQ=255) acacGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCaccacc < 1:477313/100‑1 (MQ=255) cGTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGt < 2:1488057/100‑1 (MQ=255) gTAAATCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTg > 2:2092313/1‑100 (MQ=255) aaaTCGATGGGGCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGcc < 2:616899/100‑1 (MQ=255) agatgttgCATATCCAGGGGGGCACTGTTCGGTGTTGCGATGGTGCTTTCGGCGGTATTGGTACCAATGGCCTTCTTCGGTGGCACCACCGGTGCCa > 1:458033/8‑97 (MQ=255) ggCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGcc < 2:2494952/100‑1 (MQ=255) ggCAGATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGcc > 2:601537/1‑100 (MQ=255) ggCAGATCCAGGGGGGCACTGGTCGGGATTGCAATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGcc > 1:1907160/1‑100 (MQ=255) gCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAg < 1:2642127/100‑1 (MQ=255) gATCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGtt > 2:756516/1‑100 (MQ=255) aTCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTtc < 2:2198403/100‑1 (MQ=255) aTCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTtc > 2:1302921/1‑100 (MQ=255) aTCCAGGGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTtc < 1:405987/100‑1 (MQ=255) aTCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTtc > 1:454082/1‑99 (MQ=255) ccA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTTctct < 1:1090468/100‑1 (MQ=255) | TGGATGACGCCATCGTGGTGGTGGAAAACGTCGAACGTATTATGAGTGAGGAAGGACTCACTCCTCGCGAAGCCACACGTAAATCGATGGGGCAGATCCA‑GGGGGCACTGGTCGGGATTGCGATGGTTCTTTCGGCGGTATTTGTACCAATGGCCTTCTTCGGCGGCACCACCGGTGCCATCTATCGCCAGTTCTCT > NC_000913/2588811‑2589007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |