| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,765,794:1 | (C)7→8 | 100% | intergenic (‑18/‑124) | yfjM ← / → rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,765,787 | 1 | . | C | 63.8% | 266.9 / 189.1 | 127 | intergenic (‑11/‑131) | yfjM/rnlA | CP4‑57 prophage; uncharacterized protein/CP4‑57 prophage; RNase LS |
| Reads supporting (aligned to +/- strand): ref base . (24/22); new base C (32/49); total (56/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.95e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.60e-01 | |||||||||||
Only 100 of 140 total aligned reads displayed.
TGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAG > NC_000913/2765689‑2765884 | tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑c < 2:164629/100‑1 (MQ=255)tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑c > 1:1625567/1‑100 (MQ=255) gTCTACTAGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACTGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc < 1:1644375/100‑1 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cc < 1:1226157/100‑1 (MQ=255) ctgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑cc < 2:1945731/100‑1 (MQ=255) ccgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGAGGACTG‑‑cc‑cc > 2:2090831/3‑100 (MQ=255) tgctgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑ccc < 1:1381967/100‑1 (MQ=255) tgGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑Cg > 1:1147072/1‑100 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑ccc‑c‑ccg > 2:638876/1‑98 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑Cgg > 1:57754/1‑100 (MQ=255) ggCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCACCCATTTTGTGGACTG‑‑c > 1:1570781/1‑92 (MQ=255) gCGAATAATTACTAATTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑ccc‑c‑ccgg < 2:835071/100‑4 (MQ=255) gCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGt < 1:164204/100‑1 (MQ=255) cGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTa < 2:2429954/100‑1 (MQ=255) gAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑cc‑ccc‑c‑ccggta < 2:323368/100‑6 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAg < 1:1402769/100‑1 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGATGCGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CCACCC‑C‑CGGTAg > 1:2012809/1‑100 (MQ=255) aatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACg > 2:1977580/1‑99 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGa > 2:1148147/1‑100 (MQ=255) atTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGa > 1:2236688/1‑100 (MQ=255) ttACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCC‑CCC‑C‑CGGTAGACg > 1:34510/1‑99 (MQ=255) ttACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGAt < 1:783412/100‑1 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATcc > 1:1112607/1‑100 (MQ=255) aCTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATcc < 1:3019466/100‑1 (MQ=255) tAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTg > 2:3038106/1‑100 (MQ=255) aGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGccc < 1:1452564/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGccc < 1:1748314/100‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGccc < 2:359854/100‑1 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCtat < 1:110271/100‑1 (MQ=255) aTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTAGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCta < 1:2835477/100‑1 (MQ=255) gAGTTGCTGCTTGGTGAGATCAGGAAGAGGGTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑ACC‑C‑CGGTAGACGATCCTGccc < 1:740479/94‑1 (MQ=255) aGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGt < 2:2574250/100‑1 (MQ=255) gTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGT‑GACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTg < 2:2022978/100‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTg < 1:2090819/100‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTgg < 1:2657743/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTgg < 1:1816949/100‑1 (MQ=255) tgctgcTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGa > 1:2586133/1‑100 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAg < 1:1410031/100‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑‑C‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGt > 2:120353/1‑100 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAg < 2:1746505/100‑1 (MQ=255) tgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAg < 1:1448710/100‑1 (MQ=255) gctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTg > 1:1770163/1‑100 (MQ=255) ttGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATGATCCACCATTTAGTGGAGTGC‑CC‑CCC‑C‑CGGTAAACGATCCTGCCCTACAGTGGGAgag > 1:537368/1‑96 (MQ=255) ttGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑CGCGTTAGACGATCCTGCCCTATAGTTGGAGTGcc < 1:2011121/100‑1 (MQ=255) ggTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATTGCCCGTTGTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCGGGATAGTTGGAGTGtcccc > 2:2799641/1‑100 (MQ=255) tGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGccccc < 1:794736/100‑1 (MQ=255) gagaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGAACCTGCCCTGTAGTTGGAGTGCCCCCtt > 2:292800/1‑99 (MQ=255) gagaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAt < 2:1147078/100‑1 (MQ=255) gagaTCAGGAAGAGGTTACCGAAACGATGGACATCAGCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTa < 2:2142641/100‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAtt < 1:2937926/100‑1 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAtt > 2:1237552/1‑100 (MQ=255) gaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTAtt > 2:2712907/1‑100 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCCAC‑CGGGAGACGATCCTGCCCTATAGTTGGAGCGCCCCCTAt > 1:1700437/1‑98 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAg < 2:645623/100‑1 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg < 1:2653023/100‑1 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg < 2:1353746/100‑1 (MQ=255) cAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAgg < 2:1969385/100‑1 (MQ=255) aGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGt < 2:1340840/100‑1 (MQ=255) agagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGc < 2:1746946/100‑1 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCt < 1:2493344/100‑1 (MQ=255) gagGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTa < 2:758952/100‑1 (MQ=255) agGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTa < 2:2442760/100‑1 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTaa > 2:3028946/1‑100 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTaa > 2:2520643/1‑100 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGAAGACGAGCCTGCCATATAGTTGGAGTGACCCCTATTCAGGTGGCTa > 2:441043/1‑99 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTaa > 2:640355/1‑99 (MQ=255) tACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAtt < 1:974342/100‑1 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAtt < 1:2172986/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTa < 1:1149516/100‑1 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg > 1:2176783/1‑100 (MQ=255) ccGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg > 1:1153354/1‑100 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAAtttgg < 2:2825109/100‑3 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAg < 1:978601/100‑1 (MQ=255) gAAACGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGc < 2:1934903/100‑1 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGGCTG‑‑GC‑CTC‑C‑CGGTAGACGATCCTGCCCTATAGTTGCAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAAt < 1:711439/99‑1 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAAt < 1:2125091/100‑1 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc < 2:2694730/100‑1 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCGATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATc > 2:1432212/1‑100 (MQ=255) tGGACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCaa > 2:1309604/1‑100 (MQ=255) ggACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAAt < 2:1860311/100‑1 (MQ=255) ggACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAAt < 1:3038087/100‑1 (MQ=255) gACATCATCCCCCATTTTGTGTACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 2:485097/100‑1 (MQ=255) gACATCATCCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 2:1934715/100‑1 (MQ=255) gACATCATCACACATTTTGTGGACTG‑‑CC‑CCCAC‑CCGTAGACGATCCTGCCATATAGTTGGAGTGCCCCCCATTCCGGTGGCTAAATTTAGCAAAt > 1:2918573/1‑95 (MQ=255) tcatcCCCCATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACt < 2:2236701/100‑1 (MQ=255) cccccATTTTGTGGACTG‑‑CCGCCC‑C‑CGGTAGACGATCCGGCCCTATTGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATaca > 1:2734583/1‑94 (MQ=255) cccccATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgg > 2:2628495/1‑100 (MQ=255) ccccATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgg > 2:2550846/1‑100 (MQ=255) ccccATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 1:2825744/1‑100 (MQ=255) cccATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg < 1:2626079/100‑1 (MQ=255) cccATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 1:1252308/1‑100 (MQ=255) cccATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAggg > 2:2663957/1‑100 (MQ=255) cccATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg > 2:430170/1‑100 (MQ=255) ccATTTTGTGGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggg > 2:1156347/1‑100 (MQ=255) tgtgGACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGtatt > 1:2103918/1‑100 (MQ=255) ggACTGC‑CC‑CCC‑C‑CGGTAGACTATCCTGCCCTGTCGTTGGGGTGCCCCATCGTCAGGTGGCTACGATTAGCAAATGAATACACTTCAGGGGGGTagtatt > 1:2735743/1‑100 (MQ=255) ggACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 2:2626330/1‑100 (MQ=255) ggACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattatt > 2:235713/1‑100 (MQ=255) gACTGC‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTg < 2:505911/100‑1 (MQ=255) cTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTag < 2:2813655/100‑1 (MQ=255) | TGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTG‑‑CC‑CCC‑C‑CGGTAGACGATCCTGCCCTATAGTTGGAGTGCCCCCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAG > NC_000913/2765689‑2765884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |