| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 99.0% | 359.2 / ‑3.3 | 103 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base T (51/51); total (51/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
GATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAC > NC_000913/2809669‑2809861 | gATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑t > 2:1578097/1‑100 (MQ=255) aTGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt > 2:1820113/1‑100 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑t > 1:2514822/1‑100 (MQ=255) tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑t > 1:1897111/1‑100 (MQ=255) aaaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑tttt < 2:704748/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttt > 2:35473/1‑100 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttt > 1:57129/1‑100 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGGTTCTCTCCTCTCGAAAGCG‑tt‑ttttttc < 1:2388993/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttttc < 2:2751991/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttttc < 2:2160194/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttttc < 1:2180961/100‑3 (MQ=255) gACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttttc < 2:2317353/100‑3 (MQ=255) aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttttct > 1:1089627/1‑97 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCTACCCGTCTGGGATTCTCTCCTCTCGGAAGCG‑tt‑ttttttctcc < 1:1497266/99‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCt < 2:2289155/100‑1 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttttctttt > 1:2020677/1‑94 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttttctc > 1:2370341/1‑94 (MQ=255) ttttCCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTg < 2:2262144/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCTTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTg < 2:695544/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTg > 2:2245750/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTg > 1:406580/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTg > 1:149361/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTg < 1:1578089/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑tt‑ttttttcgcctg > 2:2259393/1‑93 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGca > 2:2387224/1‑100 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGcatc > 2:325963/1‑100 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGcat > 1:2380869/1‑99 (MQ=255) cGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGcatca > 2:2785090/1‑100 (MQ=255) ttGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCAttt > 1:1358661/1‑100 (MQ=255) ttGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCAttt < 2:2539317/100‑1 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTAt > 2:2608391/1‑100 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTAt > 2:107402/1‑100 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATg < 1:2970576/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATg < 2:100618/100‑1 (MQ=255) ttattaGTTATATTCAGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATg < 2:3007022/100‑1 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGc < 1:654033/100‑1 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCa < 1:51039/100‑1 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCa > 1:2351425/1‑100 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCa < 2:2512115/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAgg > 1:585762/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATAAATGATGCAgga < 2:1806719/100‑2 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCGCCTGCATAAATGATGCAgga < 1:2259380/100‑2 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGgcg < 1:659971/100‑1 (MQ=255) ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATAAATGATGCAggaga < 1:1160547/100‑4 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGcgcg > 1:2186811/1‑100 (MQ=255) atatTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATTTTTTATGCATGCGCGa > 1:854670/1‑100 (MQ=255) atTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATAAATGATGCAggagaaaaa < 2:519430/100‑8 (MQ=37) ttCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGcc < 1:899892/100‑1 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAg > 2:2141893/1‑100 (MQ=255) cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGt < 2:694806/100‑1 (MQ=255) cGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGt > 1:98175/1‑100 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc < 2:570532/100‑1 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc < 2:2437191/100‑1 (MQ=255) cTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAt > 2:418462/1‑100 (MQ=255) tttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt > 2:2890963/1‑100 (MQ=255) tGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAc > 2:606224/1‑100 (MQ=255) tGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAc < 2:2514836/100‑1 (MQ=255) cGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcg > 1:2412524/1‑100 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc > 1:1260310/1‑100 (MQ=255) tCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCt < 2:1706338/100‑1 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTTTTTTTTTTCATTTATGCAGGCGCGAGCCAGTTGGTCATTACCTTGATgtt > 1:2028527/1‑97 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 1:820968/1‑100 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg < 2:850150/100‑1 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 1:609402/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc < 2:1012092/100‑1 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa < 2:3030034/100‑1 (MQ=255) tGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGc > 2:1412413/1‑100 (MQ=255) tGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGc > 2:1978854/1‑100 (MQ=255) tGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGc > 2:2854514/1‑100 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTGATTACCGCGATGCTGGCAGCCg > 2:868486/1‑100 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg > 2:868982/1‑100 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg > 2:102525/1‑100 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg > 2:606522/1‑100 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg > 2:122638/1‑100 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg > 2:1560276/1‑100 (MQ=255) ccGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag < 2:1089633/100‑1 (MQ=255) cGTCTGGGATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGag > 2:2653368/1‑99 (MQ=255) gggATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt < 2:396866/100‑1 (MQ=255) ggATTCTTGCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg < 1:971937/100‑1 (MQ=255) ggATTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCATGCGCGAGCCAGTTCGTCATTATCGCGATGCTGGCATCCGGGAGTAGTTtg > 1:2887133/1‑100 (MQ=255) aTTCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:2025119/100‑1 (MQ=255) ttCTCTCCTCTCGAGGGCG‑TTGTTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:574941/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGTTT‑TTTTTTTTTTTTTTCATTTATGCAGGCGCCAGCCCGTTCGTCCTTACCGCGATGCTGGCAGCCGGGAGTTTTTtgtt > 1:993138/1‑98 (MQ=255) ttCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 2:2551079/99‑1 (MQ=255) ttCTCTCCTCTCGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtgtg < 1:327254/99‑1 (MQ=255) tctcctctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAtt < 1:2772098/100‑1 (MQ=255) tcctctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:1254404/100‑1 (MQ=255) tcctctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 2:2617131/100‑1 (MQ=255) tcctctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 2:2012718/100‑1 (MQ=255) cctctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtact > 1:839220/1‑100 (MQ=255) ctctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctg < 2:1404774/100‑1 (MQ=255) tctcGAAAGCGTTT‑TTTTTTTTTTTTTTTATTTATGCAGGCGCGAGCCATTTCGTCATTTCCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATttctgc > 1:1639971/1‑100 (MQ=255) tctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc > 1:646181/1‑100 (MQ=255) tctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgctgc < 2:868574/100‑1 (MQ=255) ctcGAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCa > 1:1898873/1‑100 (MQ=255) gAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTg < 1:304082/100‑1 (MQ=255) gAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTg < 2:646186/100‑1 (MQ=255) gAAAGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTg < 2:2412537/100‑1 (MQ=255) aaGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTg > 1:216197/1‑98 (MQ=255) aaGCGTTT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAc < 1:35472/100‑1 (MQ=255) | GATGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGCG‑TT‑TTTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACTGAC > NC_000913/2809669‑2809861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |