| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,459,293:1 | (G)5→6 | 100% | coding (955/1482 nt) | gspE → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,459,288 | 1 | . | G | 94.3% | 418.7 / 18.2 | 123 | coding (950/1482 nt) | gspE | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base G (55/60); total (59/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
Only 100 of 130 total aligned reads displayed.
AAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑GGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCATCAG > NC_000913/3459192‑3459386 | aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑ggg < 1:2096450/100‑1 (MQ=255) tggCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑gggg > 2:3041645/2‑100 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑gggg < 1:2189190/100‑1 (MQ=255) gCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑gggggg > 1:202456/1‑99 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑gggggg > 1:925082/1‑98 (MQ=255) ttGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑GGGGGgaaa < 2:438060/100‑2 (MQ=255) tGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑GGGGGgaaat < 1:1034360/100‑3 (MQ=255) ggCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTc > 1:358100/1‑100 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑GGGGGAAATTCGTg < 2:583498/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGt > 1:2356471/1‑99 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTg < 2:2371251/100‑1 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGa < 1:1732802/100‑1 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGa > 1:1335724/1‑100 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGa < 1:784868/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGAt < 2:2186426/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGAt < 2:1793856/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGAt < 2:1731188/100‑1 (MQ=255) gCAGGTGGATACCCGTGTGGGTCTGGCTTTCGCCCGCGGCGTGCGCGCCGTACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGt < 1:1276916/95‑1 (MQ=255) gCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATAc > 1:2019465/1‑100 (MQ=255) gCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATAc < 2:717409/100‑1 (MQ=255) cAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACa > 1:2132432/1‑100 (MQ=255) gTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGaa < 1:2405968/100‑1 (MQ=255) tGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGaaa < 1:1523790/100‑1 (MQ=255) tGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCAGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGaaa > 2:147445/1‑100 (MQ=255) aaTACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAAcc > 2:1169887/1‑100 (MQ=255) aaTACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAAcc > 2:2911261/1‑100 (MQ=255) aaTACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAAcc > 1:106150/1‑100 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCgcgc > 1:1797046/1‑100 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCgcgc > 2:2500737/1‑100 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCgcgc > 2:1625927/1‑100 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTGCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCgcgc < 1:909668/100‑1 (MQ=255) ccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCa < 1:1573975/100‑1 (MQ=255) ccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCa < 2:1926842/100‑1 (MQ=255) ccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCa < 2:201034/100‑1 (MQ=255) ccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATCCGTGATACAGAAACCGCGCa < 1:1871211/100‑1 (MQ=255) cGTGTGGATATTTCTTTCGCTCGCGGCCTGCGCGCCATACGTCTACAGGACCCGGATGTCCTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCa < 1:2186814/99‑1 (MQ=255) cGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAg > 1:2699371/1‑100 (MQ=255) cGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAg < 1:2233025/100‑1 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAAGCGCGCAGATTGc < 2:2004879/100‑1 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGc > 2:1610918/1‑100 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAACTTCGTGATACAGAAACCGCGCAGATTCCgg > 1:2727829/1‑99 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGt < 2:2025347/100‑1 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGt < 1:2197430/100‑1 (MQ=255) tGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTc > 2:1661828/1‑100 (MQ=255) tGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTc > 1:576594/1‑100 (MQ=255) gTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCa > 2:335730/1‑100 (MQ=255) tCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAg < 1:2720843/100‑1 (MQ=255) tCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAg < 1:44025/100‑1 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg < 2:1915496/100‑1 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg < 1:742564/100‑1 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAACTCGTGATACAGAACCCGCGCAGATTGCGGTTCAg > 1:439289/1‑99 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc > 1:2125603/1‑100 (MQ=255) ttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGcc > 2:2557741/1‑100 (MQ=255) tcgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCCTGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCt > 1:2318882/1‑100 (MQ=255) gctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCg < 2:652837/100‑1 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc > 2:2082658/1‑100 (MQ=255) ctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGc < 2:1498632/100‑1 (MQ=255) cgcgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTc < 1:2399181/100‑1 (MQ=255) ggCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCAcc < 1:2189246/100‑1 (MQ=255) ccTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCgg > 2:2851315/1‑100 (MQ=255) cTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGc > 1:1446048/1‑100 (MQ=255) cTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGc < 1:994335/100‑1 (MQ=255) gcgcgcCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑GGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCAt > 1:2857719/1‑100 (MQ=255) cgcCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCt < 1:400258/100‑1 (MQ=255) cgcCATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCt > 1:2250670/1‑100 (MQ=255) cATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt < 2:925087/100‑1 (MQ=255) cATACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGt < 1:2240348/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc > 2:2220173/1‑100 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc > 2:2571345/1‑100 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 2:657465/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 1:2972330/100‑1 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 2:2247164/1‑100 (MQ=255) ttCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct < 1:1553222/100‑1 (MQ=255) ttCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct < 2:1098536/100‑1 (MQ=255) ttCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActct > 1:59274/1‑100 (MQ=255) tCGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACtctc < 1:2851298/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 1:908716/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 2:2459176/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 1:2488899/100‑1 (MQ=255) gCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa > 2:2815869/1‑100 (MQ=255) gCCAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa > 1:2451258/1‑100 (MQ=255) cgatctcccGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 1:375588/94‑1 (MQ=255) ccAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 2:534141/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 1:2320471/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 2:1824049/100‑1 (MQ=255) aGGGCCCGGAGGTCGTCATGGTCGGGGGAAATTCGTGTTACACACACCGCGCAGATTGCGGTTCAGGCCTCGCTCACTGGCCATCTGGTACTGTCagc < 1:202699/98‑3 (MQ=255) gACCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTc > 2:549486/1‑100 (MQ=255) aCCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc > 2:1884265/1‑100 (MQ=255) aCCCGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 2:1446054/100‑1 (MQ=255) cccGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAacagatcg > 2:375592/1‑95 (MQ=255) cccGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 2:2356492/1‑100 (MQ=255) cccGGATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 2:916573/1‑100 (MQ=255) ggATGTCGTCATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCacac < 2:806958/100‑1 (MQ=255) gtcgtcATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAAc > 1:477781/1‑100 (MQ=255) cgtcATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg < 1:1911559/100‑1 (MQ=255) ntcATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACa > 1:1476698/2‑98 (MQ=255) gtcATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGt > 1:1799823/1‑100 (MQ=255) tcATGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTg < 2:1821608/100‑1 (MQ=255) aTGGTGGGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCa < 2:2549028/100‑1 (MQ=255) tt‑ggCGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCATCAg < 1:2758040/99‑1 (MQ=255) | AAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGT‑GGGGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCATCAG > NC_000913/3459192‑3459386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |