| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4606703 | 103 (0.910) | 9 (0.080) | 6/168 | NT | 8.1% | coding (998/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent |
| ? | NC_000913 | = 4606716 | 108 (1.010) | coding (985/1032 nt) | rsmC | 16S rRNA m(2)G1207 methyltransferase, SAM‑dependent | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
AACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4606602‑4606703‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT < NC_000913/4606716‑4606618 AACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGC > 1:2245480/1‑100AACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGC > 2:2027203/1‑100 ACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCG < 2:2786604/100‑1 CGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC > 2:843369/1‑100 CGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC < 2:2100368/100‑1 GGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCA < 1:2057670/100‑1 GATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCAT < 1:802525/100‑1 GATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCAT < 2:2950438/100‑1 ATAAGGCGTTCACGCCGCATCCGACACGGTATTCTGCGAGATAATTAACCTTTCTGCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCAT < 1:155250/99‑1 TAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTA < 1:2882418/100‑1 AAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTAT < 2:2401951/100‑1 AGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATG < 2:198528/100‑1 AGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATG < 1:2844266/100‑1 GTTCTCGCCGAACACGACACGGTATTCGGCGAGATAATTCACCTTTCTTCGCCTGGCGGGTCATAATGGCGCTTCAAGGTGTATCGCGCCATTATGACC < 2:606556/99‑1 GCGCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGA > 2:2652575/1‑100 GCTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACC < 2:687215/100‑1 GCTTCAAGGTGTAGCGCGCCATTATGAACCGCCAGGACGATAAAGGCTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTA > 1:1887969/1‑93 CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT > 2:1278060/1‑100 CTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT > 2:2916881/1‑100 AACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCGGGTCATAATGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4606602‑4606703‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcTTCAAGGTGTATCGCGCCATTATGACCCGCCAGGCGAAGAAAGGTTAATTATCTCGCCGAATACCGTGTCGGATGCGGCGTGAACGCCTTATCCGACCT < NC_000913/4606716‑4606618 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |