| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 881937 = | NA (NA) | 5 (0.050) | 4/156 | NT | NA | intergenic (+8/+39) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase; penicillin‑binding protein 6a/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx |
| ? | NC_000913 | 881970 = | NA (NA) | intergenic (+41/+6) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase; penicillin‑binding protein 6a/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx | |||||
GAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/882045‑881937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAG > NC_000913/881970‑882068 GAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 2:1126786/1‑100GAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:987099/1‑100GAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:2517887/1‑100 GATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCG > 1:316591/1‑100 TTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCGTCCGGT < 2:2973031/100‑1 TTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 2:2368077/100‑1 TGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTT > 2:1562278/1‑100 GTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTA > 1:1488931/1‑100 GTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTA > 2:2283207/1‑100 GTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTA < 1:497512/100‑1 TTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT > 2:2268632/1‑100 TTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT > 2:1546686/1‑100 ATAACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGG > 1:2534184/1‑96 TAACCGGGTGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAAC > 1:1053982/1‑100 AACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACA > 1:1722083/1‑100 CCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAAT > 2:133652/1‑100 CCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAAT > 2:2382427/1‑100 CATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAA > 1:1197515/1‑100 CATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAA < 2:2494237/100‑1 ATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAA > 1:655816/1‑100 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG > 2:2823752/1‑100 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG > 1:2608692/1‑100 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG < 1:2368064/100‑1 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG > 1:1759883/1‑100 CGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCG > 2:824482/1‑100 TTATACGTCATTAATACATCAAGTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTT > 1:1776107/1‑100 ATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCA < 2:2608707/100‑1 ATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCA < 1:2922006/100‑1 TACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAG < 1:834534/100‑1 TACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAG > 1:376639/1‑100 GAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/882045‑881937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAG > NC_000913/881970‑882068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |