New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3625632NA (NA)4 (0.040) 3/166 NT NA noncoding (44/82 nt) RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 = 3625670 NA (NA)noncoding (82/82 nt) RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP260 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 126 total aligned reads displayed.

ACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAA  >  NC_000913/3625533‑3625731
                                                                                                   |                                                                                                   
aCTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATT                                                                                                     >  2:2182043‑M1/1‑100 (MQ=255)
  tGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTgc                                                                                                   <  2:1779538‑M1/100‑3 (MQ=255)
  tGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTgc                                                                                                   <  2:645912‑M1/100‑3 (MQ=255)
   gAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCa                                                                                                  >  1:621930/1‑100 (MQ=255)
   gAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCa                                                                                                  >  1:419258/1‑100 (MQ=255)
     gTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCAcc                                                                                                <  1:1174734/100‑1 (MQ=255)
     gTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCAcc                                                                                                <  2:2969387/100‑1 (MQ=255)
       aTCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGa                                                                                              <  1:2697778/100‑1 (MQ=255)
       aTCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGa                                                                                              >  2:1876744/1‑100 (MQ=255)
        tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGAt                                                                                             >  1:1200843/1‑100 (MQ=255)
        tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGAt                                                                                             <  2:183599/100‑1 (MQ=255)
        tCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGAt                                                                                             >  1:1345567/1‑100 (MQ=255)
         naaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGATCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATg                                                                                            >  2:2890289/2‑100 (MQ=255)
         cAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATg                                                                                            >  2:2114903/1‑100 (MQ=255)
          aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGc                                                                                           >  2:2975095/1‑100 (MQ=255)
          aaaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGc                                                                                           <  2:2471782/100‑1 (MQ=255)
           aaaaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCg                                                                                          >  2:844091/1‑100 (MQ=255)
             aaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTa                                                                                        >  1:1794767/1‑100 (MQ=255)
             aaGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTa                                                                                        <  1:800844/100‑1 (MQ=255)
                ccGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTc                                                                                     <  1:621242/100‑1 (MQ=255)
                ccGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTc                                                                                     >  2:2940015/1‑100 (MQ=255)
                    ttAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCta                                                                                 <  2:2586341/100‑1 (MQ=255)
                      aaCTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCtata                                                                               <  1:2993660/100‑1 (MQ=255)
                         tGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGc                                                                            >  1:297165/1‑100 (MQ=255)
                          gAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCt                                                                           >  1:3009793/1‑100 (MQ=255)
                           aaaCTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCtt                                                                          <  1:1901019/100‑1 (MQ=255)
                             gcTGTCCAGGTATTGGAGTTCAGTTCAAAAACGCCTTGGCCGGCCTAATAATGACAAAAATTCAATAAATTGCACCGATGCGTAGTCCCtatca                                                                              >  1:2592847/2‑92 (MQ=255)
                             aCTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTAc                                                                        <  2:1065841/100‑1 (MQ=255)
                              cTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACg                                                                       >  2:394510/1‑100 (MQ=255)
                              cTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGc                                                                      >  2:547916/1‑100 (MQ=255)
                                gTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGATTACGc                                                                      >  1:633989/1‑99 (MQ=255)
                                 tCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCAt                                                                    >  2:1130109/1‑100 (MQ=255)
                                   cAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCg                                                                  >  2:2331348/1‑100 (MQ=255)
                                      gTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTgcccgatgcgtaagcttatagggactacgcatcggtgc                                                               <  2:24838‑M1/100‑39 (MQ=255)
                                      gTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTgcccgatgcataagcttatagggactacgcatcggtgc                                                               <  2:903751‑M1/100‑39 (MQ=255)
                                      gTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGC                                                               >  2:1572129‑M2/1‑100 (MQ=255)
                                      gTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGC                                                               >  2:297167‑M2/1‑100 (MQ=255)
                                       ttttGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTgcccgatgcgtaagcttatagggactacgcatcggtgca                                                              <  1:2174548‑M1/100‑40 (MQ=255)
                                         ttGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaat                                                            >  1:1725256‑M2/1‑97 (MQ=255)
                                           gggggTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTg                                                          >  2:2664296/1‑100 (MQ=255)
                                            ggggTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGt                                                         >  2:3002445/1‑100 (MQ=255)
                                             gggTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTa                                                        >  2:616328/1‑100 (MQ=255)
                                                 catttCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTa                                                    <  2:2859983/97‑1 (MQ=255)
                                                   gTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACg                                                  <  1:405482/100‑1 (MQ=255)
                                                   gTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACg                                                  >  2:2446053/1‑100 (MQ=255)
                                                   gTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACg                                                  <  2:53351/100‑1 (MQ=255)
                                                    ttCAGAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGc                                                 <  2:193248/100‑1 (MQ=255)
                                                     tCATAAACGCCTTATCCGGCCTAAAGACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCGTACGAATCGGGCAATTGTATTTACGc                                                 <  1:1260269/99‑1 (MQ=255)
                                                     tCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGcc                                                >  1:1953781/1‑100 (MQ=255)
                                                     tCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGcc                                                <  2:1520802/100‑1 (MQ=255)
                                                      cATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCa                                               >  2:2677006/1‑100 (MQ=255)
                                                      cATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCa                                               >  1:2132954/1‑100 (MQ=255)
                                                      cATAAACGCCTTATCCGGCCTAAAAACAACGAAGATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGCATTTACGCCa                                               >  1:2004247/1‑100 (MQ=255)
                                                        tAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCAtt                                             >  1:2328438/1‑100 (MQ=255)
                                                        tAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCAtt                                             >  2:2358451/1‑100 (MQ=255)
                                                         aaaCGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTg                                            >  1:341837/1‑100 (MQ=255)
                                                           aCGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTc                                          <  2:1794778/100‑1 (MQ=255)
                                                            cGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTcc                                         <  2:1798238/100‑1 (MQ=255)
                                                            cGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTcc                                         <  2:636067/100‑1 (MQ=255)
                                                            cGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTcc                                         <  1:942350/100‑1 (MQ=255)
                                                             gCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGTTGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTccc                                        <  1:1665274/100‑1 (MQ=255)
                                                              ccTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCa                                       >  2:2357244/1‑100 (MQ=255)
                                                               cTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCaa                                      <  2:1675840/100‑1 (MQ=255)
                                                               cTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCaa                                      >  1:1462833/1‑100 (MQ=255)
                                                                 tATCCGGCCTAAAAACAACTAAAATTCAATAATTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATc                                    <  2:1457258/100‑1 (MQ=255)
                                                                 tATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATc                                    >  1:595901/1‑100 (MQ=255)
                                                                 tATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCCATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATc                                    >  2:2355011/1‑100 (MQ=255)
                                                                   tCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGt                                  >  2:1888044/1‑100 (MQ=255)
                                                                   tCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGt                                  >  1:1371553/1‑100 (MQ=255)
                                                                    ccGGCCTAAAAACAACTAAAATTCAATGAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCAAATCGTc                                 >  2:1078005/1‑100 (MQ=255)
                                                                    ccGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTc                                 >  2:349781/1‑100 (MQ=255)
                                                                    ccGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTc                                 >  2:2627281/1‑100 (MQ=255)
                                                                    ccGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGAGCAATTGTATTTACGCCATTGTCCCAATCGTc                                 >  1:1854550/1‑100 (MQ=255)
                                                                     cGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCt                                <  2:1216083/100‑1 (MQ=255)
                                                                        ccTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTcc                             <  2:2452064/100‑1 (MQ=255)
                                                                        ccTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTcc                             >  1:2492005/1‑100 (MQ=255)
                                                                        ccTAAAAACAACTAAAATGCAAGAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTcc                             <  2:443195/100‑1 (MQ=255)
                                                                          tAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTg                           <  1:271124/100‑1 (MQ=255)
                                                                              aacaacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATc                       >  1:1036751/1‑100 (MQ=255)
                                                                              aacaacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATc                       <  1:1996169/100‑1 (MQ=255)
                                                                              aacaacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATc                       <  2:1148088/100‑1 (MQ=255)
                                                                              aacaacTAAAATTCAATAAATTGCACCGATGCGTAGACCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCCTTGTCCCAATCGTCTTCCTGAATc                       >  2:2153183/1‑100 (MQ=255)
                                                                               acaacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCg                      <  1:2822793/100‑1 (MQ=255)
                                                                                caacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgc                     >  2:1516070/1‑100 (MQ=255)
                                                                                 aacTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgca                    <  1:737275/100‑1 (MQ=255)
                                                                                   cTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgcagc                  >  2:565086/1‑100 (MQ=255)
                                                                                   cTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCgcagc                  >  2:2031763/1‑100 (MQ=255)
                                                                                     aaaaTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGcagcag                >  2:829558/1‑100 (MQ=255)
                                                                                      aaaTTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCagcagc               <  2:1347390/100‑1 (MQ=255)
                                                                                         ttCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCa            >  2:658811/1‑100 (MQ=255)
                                                                                           cAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAAt          >  2:507855/1‑100 (MQ=255)
                                                                                           cAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAAt          >  2:1043438/1‑100 (MQ=255)
                                                                                             aTAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATgg        <  2:419262/100‑1 (MQ=255)
                                                                                              tAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGt       <  2:1364214/100‑1 (MQ=255)
                                                                                               aaaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTg      >  2:2864517/1‑100 (MQ=255)
                                                                                               aaaTTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTg      <  1:1973952/100‑1 (MQ=255)
                                                                                                aaTTgcccgatgcgtaagcttatagggactacgcatcggtgcaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgaccccca     >  2:736731‑M1/1‑4 (MQ=255)
                                                                                                  ttGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGaaa   <  2:581713/100‑1 (MQ=255)
                                                                                                  ttGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGaaa   <  2:372069/100‑1 (MQ=255)
                                                                                                   tGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCaatttattgaattttagttgtttttaggccggataaggcgtttatgaactgacccccaaaa  <  1:2174548‑M2/100‑62 (MQ=255)
                                                                                                   |                                                                                                   
ACTGAGTATCAAAAAGCCGGTTAACTGAAACTGTCCAGGTTTTGGGGGTCAGTTCATAAACGCCTTATCCGGCCTAAAAACAACTAAAATTCAATAAATTGCACCGATGCGTAGTCCCTATAAGCTTACGCATCGGGCAATTGTATTTACGCCATTGTCCCAATCGTCTTCCTGAATCGCAGCAGCGCAATGGTGAAAA  >  NC_000913/3625533‑3625731

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.