New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3781697NA (NA)6 (0.060) 5/164 NT NA intergenic (+9/+44) trmL/cysE tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent/serine acetyltransferase
?NC_000913 = 3781726 NA (NA)noncoding (29/29 nt) REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 144 total aligned reads displayed.

CCGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCA  >  NC_000913/3781598‑3781796
                                                                                                   |                                                                                                   
ccGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAg                                                                                                     >  2:1075828/1‑100 (MQ=255)
ccGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAATTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAg                                                                                                     >  1:2346328/1‑100 (MQ=255)
    agcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGCGGTATCCGGGAGCGGTATTGAGAGATTATTTACTGTAGgcag                                                                                                 <  2:2070770‑M1/100‑5 (MQ=255)
     gcaTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccgg                                                                                                <  1:1430930‑M1/100‑6 (MQ=255)
      caTGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccgga                                                                                               >  1:2697402‑M1/1‑94 (MQ=255)
        tGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGATACTGTAGGCCGGATa                                                                                             <  1:548899/100‑1 (MQ=255)
          aaTCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAga                                                                                           >  1:2026399/1‑100 (MQ=255)
           aTCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgat                                                                                          <  1:2451697/100‑1 (MQ=255)
            tCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatg                                                                                         <  1:1037771/100‑1 (MQ=255)
            tCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatg                                                                                         <  1:221681/100‑1 (MQ=255)
             cTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatga                                                                                        >  1:840622/1‑100 (MQ=255)
              tGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgat                                                                                       >  2:171214/1‑100 (MQ=255)
              tGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAgatgat                                                                                       <  2:1597310/100‑1 (MQ=255)
               gTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGAtt                                                                                      >  1:695486/1‑100 (MQ=255)
                tCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTa                                                                                     <  1:2399074/100‑1 (MQ=255)
                 ccAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTAc                                                                                    <  1:1327150/100‑1 (MQ=255)
                 ccAATGCGGGGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATCGAGAGCTTAGTTACTGTAGGCCGGATAGATGATTAc                                                                                    >  1:1524387/1‑100 (MQ=255)
                  cAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACa                                                                                   >  1:1936/1‑100 (MQ=255)
                   aaTGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACAt                                                                                  >  2:3019050/1‑100 (MQ=255)
                     tGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCg                                                                                <  1:1743832/100‑1 (MQ=255)
                       cGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCA                                                                              >  1:195003‑M2/1‑100 (MQ=255)
                         gtgtCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGCGATTAGTTACTGTAGGCCGGATAGATGATGACATCGCAT                                                                             <  1:2128495‑M2/99‑1 (MQ=255)
                          tgtCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCAT                                                                             <  1:1400112‑M2/98‑1 (MQ=255)
                            tCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggatgcgatgtaatcatctatccgg                                                                         <  1:255425‑M1/100‑29 (MQ=255)
                             cGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggatgcgatgtaatcatctatccggc                                                                        <  1:315860‑M1/100‑30 (MQ=255)
                              ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggatgcgatgtaatcatctatccggcc                                                                       <  1:2506583‑M1/100‑31 (MQ=255)
                              ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                       >  1:380288/1‑100 (MQ=255)
                               gTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCAc                                                                      <  1:2809460/100‑1 (MQ=255)
                               gTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCAc                                                                      <  2:732748/100‑1 (MQ=255)
                               gTAGTGGTGTATGAAGCCTGGCGGCAGGTGGTGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggatgcgatgtaatcatctatccggcct                                                                      <  2:240005‑M1/100‑32 (MQ=255)
                                 aGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGgccggatgcgatgtaatcatctatccggcctac                                                                    <  2:2400195‑M1/100‑34 (MQ=255)
                                   tggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                  <  2:1192240/100‑1 (MQ=255)
                                    ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                 >  1:2382457/1‑100 (MQ=255)
                                      tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                               <  1:3015882/100‑1 (MQ=255)
                                      tgtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATcaca                                                               >  1:3015453/1‑100 (MQ=255)
                                       gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                              <  1:1006525/100‑1 (MQ=255)
                                       gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                              <  2:471354/100‑1 (MQ=255)
                                        taggAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAgg                                                             <  2:1042867/97‑1 (MQ=255)
                                         aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGa                                                            >  2:739218/1‑100 (MQ=255)
                                              gCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTa                                                       <  1:2497552/100‑1 (MQ=255)
                                               ccTGGCGGCAGTTGGGGTATCCGGGCGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAg                                                      >  1:1135906/1‑100 (MQ=255)
                                               ccTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAg                                                      >  2:2637544/1‑100 (MQ=255)
                                                  ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                   >  2:2113993/1‑100 (MQ=255)
                                                   gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                  >  2:289761/1‑100 (MQ=255)
                                                   gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATGAGTTGCTGTAGGCCGGATAGATGATTACCTCGCATCCGGCACGATCACAGGACATTAGatc                                                   <  1:2017491/99‑1 (MQ=255)
                                                   gcagcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                  <  1:2096447/97‑1 (MQ=255)
                                                    cggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatccc                                                 >  1:150644/1‑100 (MQ=255)
                                                    cggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatccc                                                 >  1:684271/1‑100 (MQ=255)
                                                           tGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCa                                          <  2:1936/100‑1 (MQ=255)
                                                             gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCGCGATCACAGGACATTAGATCCCATCCCCATa                                        <  2:290013/100‑1 (MQ=255)
                                                             gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        >  2:858658/1‑100 (MQ=255)
                                                             gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        <  1:962111/100‑1 (MQ=255)
                                                             gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        <  1:2097018/100‑1 (MQ=255)
                                                              ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                       >  1:2524237/1‑100 (MQ=255)
                                                              ggTATCCGGGAGCAGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATa                                        <  1:696223/99‑1 (MQ=255)
                                                               gTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGTCACGATCACAGGACATTAGATCCCATCCCCATACt                                      <  1:1338501/100‑1 (MQ=255)
                                                                tATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTc                                     <  2:117995/100‑1 (MQ=255)
                                                                  tCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCaa                                   >  2:216649/1‑100 (MQ=255)
                                                                  tCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCaa                                   <  2:267865/100‑1 (MQ=255)
                                                                    cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                 <  2:520907/100‑1 (MQ=255)
                                                                    cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                 >  1:400437/1‑100 (MQ=255)
                                                                    cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                 >  1:1652714/1‑100 (MQ=255)
                                                                     ttccgatctATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATg                                <  2:1613847/92‑1 (MQ=255)
                                                                       gAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTa                              >  1:6958/1‑100 (MQ=255)
                                                                           ggTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGt                          <  2:768373/100‑1 (MQ=255)
                                                                           ggTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGt                          <  2:849524/100‑1 (MQ=255)
                                                                            gTATTGAGAGATTCGTTACTGTAGGCCGGATAGATGATTACATCGCACCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                         <  1:250365/100‑1 (MQ=255)
                                                                            gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                         <  1:2113981/100‑1 (MQ=255)
                                                                            gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                         <  1:2711865/100‑1 (MQ=255)
                                                                            gTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGtt                         <  1:246460/100‑1 (MQ=255)
                                                                             tATTGAGAGATTAGTTACTGTAGGCCGGATAGATTATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTa                        <  1:800235/100‑1 (MQ=255)
                                                                              aTTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATgagatcggaa                       >  1:1613838/1‑91 (MQ=255)
                                                                              aTTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTaa                       >  1:177188/1‑100 (MQ=255)
                                                                              aTTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTaa                       >  2:1901718/1‑100 (MQ=255)
                                                                               ttGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAAt                      <  2:695491/100‑1 (MQ=255)
                                                                                 gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  1:667933/1‑100 (MQ=255)
                                                                                 gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  2:2365608/1‑100 (MQ=255)
                                                                                 gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  1:513158/1‑100 (MQ=255)
                                                                                 gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                    >  2:1766508/1‑100 (MQ=255)
                                                                                   gagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCg                  >  1:1147898/1‑100 (MQ=255)
                                                                                      aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg               <  2:232229/100‑1 (MQ=255)
                                                                                      aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg               <  2:2026411/100‑1 (MQ=255)
                                                                                      aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg               <  2:2174885/100‑1 (MQ=255)
                                                                                         aGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGaaa            >  2:1045461/1‑100 (MQ=255)
                                                                                          gTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAAt           >  2:3002450/1‑100 (MQ=255)
                                                                                            tACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCCCAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGc         <  1:1954964/100‑1 (MQ=255)
                                                                                            tACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGc         >  1:2766066/1‑100 (MQ=255)
                                                                                             aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt        <  1:847790/100‑1 (MQ=255)
                                                                                             aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt        <  2:231647/100‑1 (MQ=255)
                                                                                             aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt        <  2:2399685/100‑1 (MQ=255)
                                                                                             aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt        <  2:684276/100‑1 (MQ=255)
                                                                                              cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg       >  1:2282027/1‑100 (MQ=255)
                                                                                              cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg       <  1:1077083/100‑1 (MQ=255)
                                                                                                gTAGGCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccact     <  2:2400195‑M2/100‑68 (MQ=255)
                                                                                                gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGCCATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt     >  1:1435289/1‑100 (MQ=255)
                                                                                                gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt     >  2:409050/1‑100 (MQ=255)
                                                                                                 tAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTc    <  2:583836/100‑1 (MQ=255)
                                                                                                  aGGCCGGATAGATGACTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc   <  2:3015472/100‑1 (MQ=255)
                                                                                                   ggCCGGATAGATGATTACATCGCATCCGGCctacagtaactaatctctcaataccgctcccggataccccaactgccgccaggcttcatacaccactacc  <  2:763036‑M2/100‑71 (MQ=255)
                                                                                                   ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa  <  2:400441/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CCGCAGCATGAATCTGTCCAATGCGGTGTCGGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCA  >  NC_000913/3781598‑3781796

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.