New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4638648 =116 (1.030)4 (0.040) 3/166 NT 3.6% coding (471/1353 nt) creD inner membrane protein
?NC_000913 4638675 = 106 (1.010)coding (498/1353 nt) creD inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 140 total aligned reads displayed.

TGTTTCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTG  >  NC_000913/4638549‑4638746
                                                                                                   |                                                                                                  
tGTTTCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGaaa                                                                                                    <  1:280174/100‑1 (MQ=255)
tGTTTCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGaaa                                                                                                    <  1:1586167/100‑1 (MQ=255)
tGTTTCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGaaa                                                                                                    <  1:1400599/100‑1 (MQ=255)
 tattcagcttcaggttctgcttccgccagtccccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAg                                                                                                   <  2:3049493‑M1/2‑1 (MQ=255)
 tattcagcttcaggttctgcttccgccagtccccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAg                                                                                                   <  2:2945812‑M1/2‑1 (MQ=255)
  tttCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAgc                                                                                                  <  2:2993048/100‑1 (MQ=255)
   ttcagcttcaggttctgcttccgccagtccccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAgcg                                                                                                 <  2:1921068‑M1/4‑1 (MQ=255)
   ttcagcttcaggttctgcttccgccagtccccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAgcg                                                                                                 <  1:2003730‑M1/4‑1 (MQ=255)
   ttCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAgcg                                                                                                 >  2:493379/1‑100 (MQ=255)
    tCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAgcgc                                                                                                <  1:2410398/100‑1 (MQ=255)
     cgcgTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGcc                                                                                               <  2:867231/100‑1 (MQ=255)
     cgcgTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGcc                                                                                               <  1:874805/100‑1 (MQ=255)
     cgcgTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGcc                                                                                               <  2:801598/100‑1 (MQ=255)
     cgcgTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGcc                                                                                               <  1:2564809/100‑1 (MQ=255)
     cgcgTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGcc                                                                                               >  2:2673027/1‑100 (MQ=255)
     cagcttcaggttctgcttccgccagtccccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAGCGcc                                                                                               >  1:7994‑M1/95‑100 (MQ=255)
        gTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGa                                                                                            <  2:1636192/100‑1 (MQ=255)
             aGCGAACTCAACGCACCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTa                                                                                       >  2:2991090/1‑100 (MQ=255)
              gCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaa                                                                                      >  2:2387263/1‑100 (MQ=255)
              gCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaa                                                                                      >  2:715670/1‑100 (MQ=255)
                 aaCTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacgg                                                                                   <  1:1382927/100‑1 (MQ=255)
                    tCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaac                                                                                >  1:1532230/1‑100 (MQ=255)
                    tCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGAGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaac                                                                                <  2:2376677/100‑1 (MQ=255)
                     naaCGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaacg                                                                               >  2:56281/2‑100 (MQ=255)
                     cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaacg                                                                               >  2:2422446/1‑100 (MQ=255)
                     cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaacg                                                                               >  1:490826/1‑100 (MQ=255)
                     cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaacg                                                                               >  1:1485222/1‑100 (MQ=255)
                     cAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaacg                                                                               >  1:1852433/1‑100 (MQ=255)
                      aaCGCGCCAAAGATCACCCTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTaacggaacgg                                                                              <  2:1324233/100‑1 (MQ=255)
                           cagtccccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAGCGCCTGAAGTTAACGGAACGGCGCTg                                                                         >  1:1384673‑M1/73‑100 (MQ=255)
                            ccAAATATCACCTTAGGCAAGCCATTTCTTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGa                                                                        >  1:1108393/1‑100 (MQ=255)
                             gtccccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAGCGCCTGAAGTTAACGGAACGGCGCTGAc                                                                       >  1:12876‑M1/71‑100 (MQ=255)
                             gtccccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAGCGCCTGAAGTTAACGGAACGGCGCTGAc                                                                       >  1:12856‑M1/71‑100 (MQ=255)
                             cAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAc                                                                       >  2:1519796/1‑100 (MQ=255)
                             cAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAc                                                                       >  1:3018233/1‑100 (MQ=255)
                              aaaTATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGAcc                                                                      <  2:41391/100‑1 (MQ=255)
                               aaTATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCa                                                                     <  2:1485228/100‑1 (MQ=255)
                                 ccttcaggtaaagggatatgcacgccctgcccgccttgctctaacccggtgccgggttcaatggtcAGCGCCTGAAGTTAACGGAACGGCGCTGACCAtt                                                                   >  1:2566737‑M1/67‑100 (MQ=255)
                                     aCCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAAc                                                               <  2:2253269/100‑1 (MQ=255)
                                        ttAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCg                                                            <  1:295229/100‑1 (MQ=255)
                                         tAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCgg                                                           >  1:2302148/1‑100 (MQ=255)
                                          aGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGc                                                          <  1:1238073/100‑1 (MQ=255)
                                          aGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGc                                                          <  2:1164279/100‑1 (MQ=255)
                                            gCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGTTGTGGTGAAAGCGACTGAAGTGAACGGAACGGCGCGGACCATTGAACCCg                                                            >  1:2808187/1‑96 (MQ=255)
                                            gCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCAc                                                        >  1:1359737/1‑100 (MQ=255)
                                               aGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCgg                                                     >  1:1884527/1‑100 (MQ=255)
                                               aGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCgg                                                     >  1:2211606/1‑100 (MQ=255)
                                                  cATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGtt                                                  >  1:1969414/1‑100 (MQ=255)
                                                   aTTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTa                                                 >  1:835632/1‑100 (MQ=255)
                                                    tttATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTag                                                <  2:1986658/100‑1 (MQ=255)
                                                    tttATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTag                                                <  2:2351425/100‑1 (MQ=255)
                                                    tttATTGTGATTAGCGGCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTag                                                <  1:266281/100‑1 (MQ=255)
                                                     ttATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTaga                                               <  1:2314344/100‑1 (MQ=255)
                                                     ttATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTaga                                               <  2:1267178/100‑1 (MQ=255)
                                                     ttATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTaga                                               <  2:2890461/100‑1 (MQ=255)
                                                      tATTGTGATTAGCGTCGGGGATGCGCGTTGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTagag                                              <  1:292829/100‑1 (MQ=255)
                                                      tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaat                                              <  2:498802/100‑5 (MQ=255)
                                                      tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaat                                              <  2:423611/100‑5 (MQ=255)
                                                      tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaat                                              <  2:1448745/100‑5 (MQ=255)
                                                      tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTGCCGGGttcaat                                              <  2:828287/100‑5 (MQ=255)
                                                      tATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTagag                                              <  1:2173467/100‑1 (MQ=255)
                                                       aTTGTGATTAGCGTCGGGGATGCGCGTGGTATTGTTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTagagn                                             <  1:1342291/100‑2 (MQ=255)
                                                       aTTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGTACCGGGTTAGAGc                                             <  1:1891160/100‑1 (MQ=255)
                                                        ttGTGATTAGCGTTGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCa                                            >  1:530600/1‑100 (MQ=255)
                                                          gtgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAg                                          >  1:323382/1‑100 (MQ=255)
                                                           tgATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAgg                                         <  2:1757727/100‑1 (MQ=255)
                                                            gATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGc                                        >  2:1024435/1‑100 (MQ=255)
                                                            gATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGc                                        >  2:1031143/1‑100 (MQ=255)
                                                                 gCGTCGGGGATGAGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCa                                   >  2:2007728/1‑100 (MQ=255)
                                                                  cGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAg                                  >  2:673155/1‑100 (MQ=255)
                                                                     cGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGc                               >  2:2268586/1‑100 (MQ=255)
                                                                      ggggATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCg                              <  2:914645/100‑1 (MQ=255)
                                                                      ggggATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCg                              >  2:448331/1‑100 (MQ=255)
                                                                       gggATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGt                             >  2:2739257/1‑100 (MQ=255)
                                                                        ggATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTg                            <  1:2848579/100‑1 (MQ=255)
                                                                         gATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGc                           <  1:2139227/100‑1 (MQ=255)
                                                                          aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                          <  1:2387250/100‑1 (MQ=255)
                                                                          aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                          <  2:1229234/100‑1 (MQ=255)
                                                                          aTGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                          <  1:987418/100‑1 (MQ=255)
                                                                           tGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCat                         >  2:1598656/1‑100 (MQ=255)
                                                                           ccgatctGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCa                          <  1:503152/93‑1 (MQ=255)
                                                                            gcgcGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCata                        <  2:2988643/100‑1 (MQ=255)
                                                                             cgcgTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCatat                       >  2:269934/1‑100 (MQ=255)
                                                                             cgcgTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCatat                       >  2:1348689/1‑100 (MQ=255)
                                                                              gcgTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATc                      <  2:1845952/100‑1 (MQ=255)
                                                                              gcgTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATc                      <  1:2268573/100‑1 (MQ=255)
                                                                                gTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATccc                    >  1:12769/1‑100 (MQ=255)
                                                                                   gTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCttt                 <  2:2419566/100‑1 (MQ=255)
                                                                                    tATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTa                <  1:2422433/100‑1 (MQ=255)
                                                                                     aTTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTAc               <  1:1646811/100‑1 (MQ=255)
                                                                                        ggtgtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTg            >  2:345311/1‑100 (MQ=255)
                                                                                        ggtgtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTg            >  1:93947/1‑100 (MQ=255)
                                                                                         gtgtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGa           >  2:912949/1‑100 (MQ=255)
                                                                                           gtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAg         >  1:2470813/1‑100 (MQ=255)
                                                                                           gtggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAg         <  1:715665/100‑1 (MQ=255)
                                                                                            tggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAgg        <  2:549446/100‑1 (MQ=255)
                                                                                             ggtgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAggg       <  2:12770/100‑1 (MQ=255)
                                                                                               tgAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCAGTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAgggg      >  1:153461/1‑99 (MQ=255)
                                                                                                gAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAgggg      >  1:581184/1‑98 (MQ=255)
                                                                                                  aaGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTg  <  2:530604/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
TGTTTCGCGTCTTAGCGAACTCAACGCGCCAAATATCACCTTAGGCAAGCCATTTATTGTGATTAGCGTCGGGGATGCGCGTGGTATTGGTGTGGTGAAAGCGCCTGAAGTTAACGGAACGGCGCTGACCATTGAACCCGGCACCGGGTTAGAGCAAGGCGGGCAGGGCGTGCATATCCCTTTACCTGAAGGGGACTG  >  NC_000913/4638549‑4638746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.