New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 501448 =NA (NA)9 (0.090) 7/164 NT NA noncoding (5/84 nt) REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 501478 = NA (NA)noncoding (35/84 nt) REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences REP46 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 155 total aligned reads displayed.

CTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACA  >  NC_000913/501349‑501546
                                                                                                   |                                                                                                  
  gAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGcc                                                                                                  >  1:713747/1‑100 (MQ=255)
  gAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGcc                                                                                                  >  1:2266582/1‑100 (MQ=255)
  gAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGcc                                                                                                  >  2:447683/1‑100 (MQ=255)
   aaCCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCa                                                                                                 >  1:214432/1‑100 (MQ=255)
   aaCCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCa                                                                                                 >  2:3033140/1‑100 (MQ=255)
    aCCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAg                                                                                                >  1:1202372/1‑100 (MQ=255)
     gacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGa                                                                                               <  1:478466‑M1/6‑1 (MQ=255)
     gacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGa                                                                                               <  2:1685068‑M1/6‑1 (MQ=255)
     gacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGa                                                                                               >  2:127736‑M1/95‑100 (MQ=255)
     gacggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGa                                                                                               <  1:181726‑M1/6‑1 (MQ=255)
     gacggggtaaacggtgggtgccggatgtaaaatatgaaaaatatggaggcatgataagacgcgctagcgtcgcatcaggcatcgagagccaaatGCCAg                                                                                                >  1:341734‑M1/95‑99 (MQ=255)
     ccaccaTTCACCTCGTTTAACGCGCGTCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGa                                                                                               >  1:2670754/1‑100 (MQ=255)
     ccAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGa                                                                                               >  1:220651/1‑100 (MQ=255)
      cAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGAt                                                                                              <  1:2691721/100‑1 (MQ=255)
      acggggtaaacggtggttgccggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGAt                                                                                              <  1:910000‑M1/7‑1 (MQ=255)
       aGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATa                                                                                             <  1:942181/100‑1 (MQ=255)
         cATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAg                                                                                           <  2:525332/100‑1 (MQ=255)
          aTTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAgg                                                                                          <  1:1062790/100‑1 (MQ=255)
            tCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCg                                                                                        <  1:1362424/100‑1 (MQ=255)
             cACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGt                                                                                       >  2:1811432/1‑100 (MQ=255)
             cACCTCGTTTAACGCGCGGCTTGCCGGAGAGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGt                                                                                       >  1:1281370/1‑100 (MQ=255)
              aCCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGtt                                                                                      >  2:1787388/1‑100 (MQ=255)
              aCCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGtt                                                                                      >  2:1885580/1‑100 (MQ=255)
               ccTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGAtgcggcgtga                                                                                     <  1:2418836/100‑10 (MQ=255)
                cTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCa                                                                                    >  1:2482249/1‑100 (MQ=255)
                cTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCa                                                                                    <  2:2559713/100‑1 (MQ=255)
                cTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCa                                                                                    >  2:1456378/1‑100 (MQ=255)
                 tCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGGAGGCCAGATAAGGCGTTCAc                                                                                   <  1:1867099/100‑1 (MQ=255)
                       aaCGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCa                                                                             >  2:2385995/1‑100 (MQ=255)
                       aaCGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCa                                                                             >  1:2879057/1‑100 (MQ=255)
                           ggatgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTg                                                                         >  2:241971‑M1/73‑100 (MQ=255)
                             atgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGc                                                                       >  2:633637‑M1/71‑100 (MQ=255)
                              tgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCa                                                                      >  2:1595291‑M1/70‑100 (MQ=255)
                              tgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCa                                                                      >  2:1372613‑M1/70‑100 (MQ=255)
                              tgtaaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCa                                                                      >  2:1373026‑M1/70‑100 (MQ=255)
                               gCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATGCGGCGTGAACGCCTTATCTGGcct                                                                     <  1:89966/100‑3 (MQ=25)
                                taaaatatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                    >  2:1072636‑M1/68‑100 (MQ=255)
                                 ttGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAttt                                                                   >  1:3009555/1‑100 (MQ=255)
                                  tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                  <  2:454216/100‑1 (MQ=255)
                                  tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                  <  1:1131891/100‑1 (MQ=255)
                                  tGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTg                                                                  <  2:220653/100‑1 (MQ=255)
                                   nccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTgg                                                                 >  1:1069246/2‑100 (MQ=255)
                                    ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                <  2:1559834/100‑1 (MQ=255)
                                    ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                <  1:2998829/100‑1 (MQ=255)
                                    ccGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                <  1:2281824/100‑1 (MQ=255)
                                    atatgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGc                                                                >  2:311190‑M1/64‑100 (MQ=255)
                                      ggAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGctc                                                              >  1:2909818/1‑100 (MQ=255)
                                      ggAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGctc                                                              <  1:2122355/100‑1 (MQ=255)
                                      atgaaaaatatgtaggcatgataagacgcgccagcgtcgcatcaggcatcgagagccaaatGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGctc                                                              >  1:50396‑M1/62‑100 (MQ=255)
                                        aGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCtctc                                                            <  2:699692/100‑1 (MQ=255)
                                         gCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGctct                                                             >  2:1099543/1‑98 (MQ=255)
                                            tGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATg                                                        >  2:2932671/1‑100 (MQ=255)
                                             gAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGc                                                       <  2:1054765/100‑1 (MQ=255)
                                             gAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGc                                                       >  2:2578464/1‑100 (MQ=255)
                                             gAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGc                                                       <  1:2086292/100‑1 (MQ=255)
                                              aaGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                      <  2:241984/100‑1 (MQ=255)
                                              aaGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                      >  2:2323289/1‑100 (MQ=255)
                                              aaGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGCCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGcc                                                      >  2:2147667/1‑100 (MQ=255)
                                               aGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCt                                                     >  2:1508396/1‑100 (MQ=255)
                                                   aGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATg                                                 <  2:708287/100‑1 (MQ=255)
                                                    gCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGc                                                >  1:1720700/1‑100 (MQ=255)
                                                    gCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGc                                                <  2:2697929/100‑1 (MQ=255)
                                                    gCCTGGAAGAGTCTTACTGGGACCGGTAAGTGATCGTTGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGc                                                <  1:2061863/100‑1 (MQ=38)
                                                     ccTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCg                                               >  2:1161423/1‑100 (MQ=255)
                                                      cTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGa                                              >  2:1184506/1‑100 (MQ=255)
                                                      cTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGa                                              <  1:1907642/100‑1 (MQ=255)
                                                        ggAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACg                                            >  2:266906/1‑100 (MQ=255)
                                                            gagTCTTACTGGGATCTTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTgg                                        <  1:1787377/100‑1 (MQ=255)
                                                             agTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgc                                       <  1:2166492/100‑1 (MQ=255)
                                                              gtgttACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCGCGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgcg                                      <  1:459648/97‑1 (MQ=255)
                                                              gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGGTGCGACGCTGgcg                                      >  1:2251365/1‑100 (MQ=255)
                                                              gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgcg                                      >  2:1931129/1‑100 (MQ=255)
                                                              gTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGgcg                                      <  2:2563148/100‑1 (MQ=255)
                                                                cTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGcgcg                                    <  2:484885/100‑1 (MQ=255)
                                                                  tACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTc                                  >  1:2352619/1‑100 (MQ=255)
                                                                   aCTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCt                                 >  2:1280372/1‑100 (MQ=255)
                                                                   aCTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCt                                 <  1:224950/100‑1 (MQ=255)
                                                                    cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCtt                                >  2:2170838/1‑100 (MQ=255)
                                                                    cTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCtt                                >  1:421727/1‑100 (MQ=255)
                                                                      gggATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTAt                              <  1:2535307/100‑1 (MQ=255)
                                                                         aTCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCGTCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATAAt                           >  1:2130109/1‑100 (MQ=255)
                                                                         aTCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCAt                           <  2:839339/100‑1 (MQ=255)
                                                                           cGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGc                         <  2:1960559/100‑1 (MQ=255)
                                                                           cGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGc                         <  2:551971/100‑1 (MQ=255)
                                                                            gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                        >  2:752848/1‑100 (MQ=255)
                                                                            gTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGcc                        <  2:1993571/100‑1 (MQ=255)
                                                                              tAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTa                      >  2:910005/1‑100 (MQ=255)
                                                                              tAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTa                      <  2:647840/100‑1 (MQ=255)
                                                                               aaGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTAc                     >  1:1319412/1‑100 (MQ=255)
                                                                                aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa                    >  1:988775/1‑100 (MQ=255)
                                                                                aGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACa                    >  1:2562464/1‑100 (MQ=255)
                                                                                      cgtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATAtttt              <  2:2043817/100‑1 (MQ=255)
                                                                                       gtcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATCttttt             >  2:3024943/1‑100 (MQ=255)
                                                                                        tcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTc            <  2:42659/100‑1 (MQ=255)
                                                                                        tcgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTc            <  1:1456372/100‑1 (MQ=255)
                                                                                         cgGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCa           <  1:784569/100‑1 (MQ=255)
                                                                                          ggTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCat          >  2:35304/1‑100 (MQ=255)
                                                                                              cGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAttt      <  1:1272931/100‑1 (MQ=255)
                                                                                               gTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATAtttt     <  2:2129141/100‑1 (MQ=255)
                                                                                                 aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTAc   >  1:1513624/1‑100 (MQ=255)
                                                                                                   |                                                                                                  
CTGAACCAGCATTCACCTCGTTTAACGCGCGGCTTGCCGGAGCGTGAAGACAGCCTGGAAGAGTCTTACTGGGATCGTTAAGTTATCGTCGGTTCGTAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTTGGCTCTCGATGCCTGATGCGACGCTGGCGCGTCTTATCATGCCTACATATTTTTCATATTTTACA  >  NC_000913/501349‑501546

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.